Protein–RNA interactions for Protein: Q8TDR0

TRAF3IP1, TRAF3-interacting protein 1, humanhuman

Predicted RBP Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1Q8TDR0 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC3.67□□□□□ -1.82
TRAF3IP1Q8TDR0 AC099786.3-201ENST00000565735 1410 ntBASIC3.67□□□□□ -1.82
TRAF3IP1Q8TDR0 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
TRAF3IP1Q8TDR0 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.67□□□□□ -1.82
TRAF3IP1Q8TDR0 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
TRAF3IP1Q8TDR0 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.66□□□□□ -1.82
TRAF3IP1Q8TDR0 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC3.66□□□□□ -1.82
TRAF3IP1Q8TDR0 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC3.66□□□□□ -1.82
TRAF3IP1Q8TDR0 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC3.66□□□□□ -1.82
TRAF3IP1Q8TDR0 RNA5SP295-201ENST00000362655 121 ntBASIC3.66□□□□□ -1.82
TRAF3IP1Q8TDR0 RN7SKP280-201ENST00000364196 304 ntBASIC3.66□□□□□ -1.82
TRAF3IP1Q8TDR0 RNA5SP515-201ENST00000364570 118 ntBASIC3.66□□□□□ -1.82
TRAF3IP1Q8TDR0 CGA-201ENST00000369582 729 ntTSL 5 BASIC3.66□□□□□ -1.82
TRAF3IP1Q8TDR0 SNORA57.1-201ENST00000391227 145 ntBASIC3.66□□□□□ -1.82
TRAF3IP1Q8TDR0 HMGB1P17-201ENST00000403495 628 ntBASIC3.66□□□□□ -1.82
TRAF3IP1Q8TDR0 MIR1193-201ENST00000408109 78 ntBASIC3.66□□□□□ -1.82
TRAF3IP1Q8TDR0 RNU6-712P-201ENST00000410558 100 ntBASIC3.66□□□□□ -1.82
TRAF3IP1Q8TDR0 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC3.66□□□□□ -1.82
TRAF3IP1Q8TDR0 GLRXP1-201ENST00000423261 334 ntBASIC3.66□□□□□ -1.82
TRAF3IP1Q8TDR0 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC3.66□□□□□ -1.82
TRAF3IP1Q8TDR0 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.66□□□□□ -1.82
TRAF3IP1Q8TDR0 PSMA6P3-201ENST00000428242 164 ntBASIC3.66□□□□□ -1.82
TRAF3IP1Q8TDR0 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC3.66□□□□□ -1.82
TRAF3IP1Q8TDR0 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.66□□□□□ -1.82
TRAF3IP1Q8TDR0 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
TRAF3IP1Q8TDR0 AC092155.2-201ENST00000454675 477 ntBASIC3.66□□□□□ -1.82
TRAF3IP1Q8TDR0 RPL18AP17-201ENST00000455326 198 ntBASIC3.66□□□□□ -1.82
TRAF3IP1Q8TDR0 SUMO2P2-201ENST00000456482 255 ntBASIC3.66□□□□□ -1.82
TRAF3IP1Q8TDR0 RPL7P38-201ENST00000488396 739 ntBASIC3.66□□□□□ -1.82
TRAF3IP1Q8TDR0 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC3.66□□□□□ -1.82
TRAF3IP1Q8TDR0 AC090453.1-201ENST00000495560 436 ntBASIC3.66□□□□□ -1.82
TRAF3IP1Q8TDR0 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC3.66□□□□□ -1.82
TRAF3IP1Q8TDR0 AC026412.2-201ENST00000512270 1075 ntBASIC3.66□□□□□ -1.82
TRAF3IP1Q8TDR0 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC3.66□□□□□ -1.82
TRAF3IP1Q8TDR0 AC092593.2-201ENST00000513866 913 ntBASIC3.66□□□□□ -1.82
TRAF3IP1Q8TDR0 RN7SKP18-201ENST00000516005 275 ntBASIC3.66□□□□□ -1.82
TRAF3IP1Q8TDR0 RNU6-583P-201ENST00000516012 92 ntBASIC3.66□□□□□ -1.82
TRAF3IP1Q8TDR0 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC3.66□□□□□ -1.82
TRAF3IP1Q8TDR0 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
TRAF3IP1Q8TDR0 AC018630.1-201ENST00000541376 925 ntBASIC3.66□□□□□ -1.82
TRAF3IP1Q8TDR0 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC3.66□□□□□ -1.82
TRAF3IP1Q8TDR0 AC090695.1-201ENST00000561269 1222 ntBASIC3.66□□□□□ -1.82
TRAF3IP1Q8TDR0 AC023813.2-201ENST00000564321 469 ntBASIC3.66□□□□□ -1.82
TRAF3IP1Q8TDR0 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC3.66□□□□□ -1.82
TRAF3IP1Q8TDR0 AC087481.2-201ENST00000565492 330 ntBASIC3.66□□□□□ -1.82
TRAF3IP1Q8TDR0 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.66□□□□□ -1.82
TRAF3IP1Q8TDR0 OR4K7P-201ENST00000580232 945 ntBASIC3.66□□□□□ -1.82
TRAF3IP1Q8TDR0 MIR4425-201ENST00000580572 84 ntBASIC3.66□□□□□ -1.82
TRAF3IP1Q8TDR0 MTCO2P2-201ENST00000591258 225 ntBASIC3.66□□□□□ -1.82
TRAF3IP1Q8TDR0 AC010591.1-201ENST00000603941 649 ntBASIC3.66□□□□□ -1.82
TRAF3IP1Q8TDR0 AC022149.2-201ENST00000621061 203 ntBASIC3.66□□□□□ -1.82
TRAF3IP1Q8TDR0 SNORA50A-202ENST00000629536 136 ntBASIC3.66□□□□□ -1.82
TRAF3IP1Q8TDR0 AC007823.1-201ENST00000569932 1566 ntBASIC3.66□□□□□ -1.82
TRAF3IP1Q8TDR0 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.66□□□□□ -1.82
TRAF3IP1Q8TDR0 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
TRAF3IP1Q8TDR0 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
TRAF3IP1Q8TDR0 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
TRAF3IP1Q8TDR0 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
TRAF3IP1Q8TDR0 SNORD9-201ENST00000362566 104 ntBASIC3.65□□□□□ -1.83
TRAF3IP1Q8TDR0 SNORD116.1-201ENST00000365628 92 ntBASIC3.65□□□□□ -1.83
TRAF3IP1Q8TDR0 AL359837.1-201ENST00000381357 287 ntBASIC3.65□□□□□ -1.83
TRAF3IP1Q8TDR0 RNU6-1122P-201ENST00000384449 107 ntBASIC3.65□□□□□ -1.83
TRAF3IP1Q8TDR0 RNU6-906P-201ENST00000384700 70 ntBASIC3.65□□□□□ -1.83
TRAF3IP1Q8TDR0 MIR184-201ENST00000384962 84 ntBASIC3.65□□□□□ -1.83
TRAF3IP1Q8TDR0 RNU2-15P-201ENST00000410692 191 ntBASIC3.65□□□□□ -1.83
TRAF3IP1Q8TDR0 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC3.65□□□□□ -1.83
TRAF3IP1Q8TDR0 CRYBB2P1-203ENST00000415709 538 ntBASIC3.65□□□□□ -1.83
TRAF3IP1Q8TDR0 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC3.65□□□□□ -1.83
TRAF3IP1Q8TDR0 RPL21P66-201ENST00000426566 466 ntBASIC3.65□□□□□ -1.83
TRAF3IP1Q8TDR0 AC084290.1-201ENST00000434995 374 ntBASIC3.65□□□□□ -1.83
TRAF3IP1Q8TDR0 HMGB1P12-201ENST00000438594 598 ntBASIC3.65□□□□□ -1.83
TRAF3IP1Q8TDR0 NOTCH2P1-201ENST00000443481 624 ntBASIC3.65□□□□□ -1.83
TRAF3IP1Q8TDR0 AL357552.1-201ENST00000445254 415 ntBASIC3.65□□□□□ -1.83
TRAF3IP1Q8TDR0 SUN3-208ENST00000453192 801 ntTSL 5 BASIC3.65□□□□□ -1.83
TRAF3IP1Q8TDR0 OFD1P3Y-201ENST00000453312 783 ntBASIC3.65□□□□□ -1.83
TRAF3IP1Q8TDR0 HMGN2P16-201ENST00000456802 261 ntBASIC3.65□□□□□ -1.83
TRAF3IP1Q8TDR0 AC012181.1-201ENST00000479895 423 ntBASIC3.65□□□□□ -1.83
TRAF3IP1Q8TDR0 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC3.65□□□□□ -1.83
TRAF3IP1Q8TDR0 MTCO3P35-201ENST00000485582 781 ntBASIC3.65□□□□□ -1.83
TRAF3IP1Q8TDR0 AL024509.2-201ENST00000493462 493 ntBASIC3.65□□□□□ -1.83
TRAF3IP1Q8TDR0 FCF1P3-201ENST00000496394 590 ntBASIC3.65□□□□□ -1.83
TRAF3IP1Q8TDR0 AC079395.1-201ENST00000510981 262 ntBASIC3.65□□□□□ -1.83
TRAF3IP1Q8TDR0 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC3.65□□□□□ -1.83
TRAF3IP1Q8TDR0 RN7SKP60-201ENST00000516985 239 ntBASIC3.65□□□□□ -1.83
TRAF3IP1Q8TDR0 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC3.65□□□□□ -1.83
TRAF3IP1Q8TDR0 OR4P1P-201ENST00000530808 1136 ntBASIC3.65□□□□□ -1.83
TRAF3IP1Q8TDR0 AC026333.2-201ENST00000542164 106 ntBASIC3.65□□□□□ -1.83
TRAF3IP1Q8TDR0 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC3.65□□□□□ -1.83
TRAF3IP1Q8TDR0 TGIF1P1-201ENST00000558095 802 ntBASIC3.65□□□□□ -1.83
TRAF3IP1Q8TDR0 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC3.65□□□□□ -1.83
TRAF3IP1Q8TDR0 AL049838.1-201ENST00000563647 981 ntBASIC3.65□□□□□ -1.83
TRAF3IP1Q8TDR0 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC3.65□□□□□ -1.83
TRAF3IP1Q8TDR0 AC006116.10-201ENST00000591836 581 ntBASIC3.65□□□□□ -1.83
TRAF3IP1Q8TDR0 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC3.65□□□□□ -1.83
TRAF3IP1Q8TDR0 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.65□□□□□ -1.83
TRAF3IP1Q8TDR0 AL365503.1-201ENST00000605247 905 ntBASIC3.65□□□□□ -1.83
TRAF3IP1Q8TDR0 AL451074.6-201ENST00000608512 729 ntBASIC3.65□□□□□ -1.83
TRAF3IP1Q8TDR0 AC243773.3-201ENST00000613270 256 ntBASIC3.65□□□□□ -1.83
TRAF3IP1Q8TDR0 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC3.65□□□□□ -1.83
TRAF3IP1Q8TDR0 AC018755.4-201ENST00000619715 454 ntBASIC3.65□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 86.5 ms