Protein–RNA interactions for Protein: Q8NF91

SYNE1, Nesprin-1, humanhuman

Known RBP Predictions only

Length 8,797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1Q8NF91 AL049874.4-201ENST00000557593 255 ntBASIC0.78□□□□□ -2.28
SYNE1Q8NF91 SLC35A1-205ENST00000622775 1206 ntTSL 5 BASIC0.78□□□□□ -2.28
SYNE1Q8NF91 AP001148.1-201ENST00000624124 2359 ntBASIC0.78□□□□□ -2.28
SYNE1Q8NF91 AC069528.2-201ENST00000624849 1991 ntBASIC0.78□□□□□ -2.28
SYNE1Q8NF91 RPL21P75-201ENST00000396599 483 ntBASIC0.78□□□□□ -2.28
SYNE1Q8NF91 RPL21P1-201ENST00000399532 476 ntBASIC0.78□□□□□ -2.28
SYNE1Q8NF91 RPL21P28-201ENST00000401418 483 ntBASIC0.78□□□□□ -2.28
SYNE1Q8NF91 AL592114.1-201ENST00000403842 483 ntBASIC0.78□□□□□ -2.28
SYNE1Q8NF91 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC0.78□□□□□ -2.28
SYNE1Q8NF91 AC004866.2-201ENST00000438285 481 ntBASIC0.78□□□□□ -2.28
SYNE1Q8NF91 RPL21P16-201ENST00000495531 483 ntBASIC0.78□□□□□ -2.28
SYNE1Q8NF91 RNA5SP282-201ENST00000516355 108 ntBASIC0.78□□□□□ -2.28
SYNE1Q8NF91 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC0.78□□□□□ -2.28
SYNE1Q8NF91 TPMTP1-201ENST00000592307 737 ntBASIC0.78□□□□□ -2.28
SYNE1Q8NF91 RNA5SP108-201ENST00000605921 117 ntBASIC0.78□□□□□ -2.28
SYNE1Q8NF91 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC0.78□□□□□ -2.28
SYNE1Q8NF91 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC0.78□□□□□ -2.28
SYNE1Q8NF91 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC0.78□□□□□ -2.28
SYNE1Q8NF91 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC0.78□□□□□ -2.28
SYNE1Q8NF91 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC0.78□□□□□ -2.28
SYNE1Q8NF91 RNU6-805P-201ENST00000365643 106 ntBASIC0.78□□□□□ -2.28
SYNE1Q8NF91 ATP5J2P3-201ENST00000451550 258 ntBASIC0.78□□□□□ -2.28
SYNE1Q8NF91 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC0.78□□□□□ -2.28
SYNE1Q8NF91 RNA5SP148-201ENST00000516527 94 ntBASIC0.78□□□□□ -2.28
SYNE1Q8NF91 FAM106CP-201ENST00000582212 507 ntBASIC0.78□□□□□ -2.28
SYNE1Q8NF91 AC105094.2-202ENST00000590968 566 ntTSL 2 BASIC0.78□□□□□ -2.28
SYNE1Q8NF91 AL451074.6-201ENST00000608512 729 ntBASIC0.78□□□□□ -2.28
SYNE1Q8NF91 AL157817.1-201ENST00000614264 790 ntBASIC0.78□□□□□ -2.28
SYNE1Q8NF91 AC095038.3-201ENST00000634439 195 ntBASIC0.78□□□□□ -2.28
SYNE1Q8NF91 ZNF542P-204ENST00000482727 1305 ntBASIC0.78□□□□□ -2.28
SYNE1Q8NF91 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC0.78□□□□□ -2.28
SYNE1Q8NF91 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC0.78□□□□□ -2.28
SYNE1Q8NF91 RNVU1-3-201ENST00000364313 161 ntBASIC0.78□□□□□ -2.28
SYNE1Q8NF91 HMGB3P23-201ENST00000414981 585 ntBASIC0.78□□□□□ -2.28
SYNE1Q8NF91 AL451074.5-201ENST00000415894 435 ntBASIC0.78□□□□□ -2.28
SYNE1Q8NF91 MORF4L1P6-201ENST00000418771 268 ntBASIC0.78□□□□□ -2.28
SYNE1Q8NF91 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC0.78□□□□□ -2.28
SYNE1Q8NF91 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC0.78□□□□□ -2.28
SYNE1Q8NF91 snoU13.18-201ENST00000459483 104 ntBASIC0.78□□□□□ -2.28
SYNE1Q8NF91 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC0.78□□□□□ -2.28
SYNE1Q8NF91 MIR4512-201ENST00000583257 77 ntBASIC0.78□□□□□ -2.28
SYNE1Q8NF91 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC0.78□□□□□ -2.28
SYNE1Q8NF91 SNORA35B-201ENST00000607417 129 ntBASIC0.78□□□□□ -2.28
SYNE1Q8NF91 MIR7973-1-201ENST00000614683 76 ntBASIC0.78□□□□□ -2.28
SYNE1Q8NF91 VN1R96P-201ENST00000446052 858 ntBASIC0.78□□□□□ -2.28
SYNE1Q8NF91 ERP27-202ENST00000540097 993 ntTSL 2 BASIC0.78□□□□□ -2.28
SYNE1Q8NF91 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC0.78□□□□□ -2.28
SYNE1Q8NF91 AC009063.1-201ENST00000563342 702 ntBASIC0.78□□□□□ -2.28
SYNE1Q8NF91 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC0.78□□□□□ -2.28
SYNE1Q8NF91 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC0.78□□□□□ -2.28
SYNE1Q8NF91 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC0.78□□□□□ -2.28
SYNE1Q8NF91 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC0.78□□□□□ -2.28
SYNE1Q8NF91 TSPAN8-201ENST00000247829 1227 ntAPPRIS P1 TSL 1 (best) BASIC0.78□□□□□ -2.28
SYNE1Q8NF91 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC0.78□□□□□ -2.28
SYNE1Q8NF91 RNU6-618P-201ENST00000363518 112 ntBASIC0.78□□□□□ -2.28
SYNE1Q8NF91 RNU6-1331P-201ENST00000363658 106 ntBASIC0.78□□□□□ -2.28
SYNE1Q8NF91 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC0.78□□□□□ -2.28
SYNE1Q8NF91 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC0.78□□□□□ -2.28
SYNE1Q8NF91 AC112220.1-201ENST00000434628 355 ntBASIC0.78□□□□□ -2.28
SYNE1Q8NF91 HIGD1AP11-201ENST00000438361 280 ntBASIC0.78□□□□□ -2.28
SYNE1Q8NF91 AC105402.2-201ENST00000438503 358 ntBASIC0.78□□□□□ -2.28
SYNE1Q8NF91 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC0.78□□□□□ -2.28
SYNE1Q8NF91 AP001528.2-201ENST00000528660 1156 ntTSL 5 BASIC0.78□□□□□ -2.28
SYNE1Q8NF91 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC0.78□□□□□ -2.28
SYNE1Q8NF91 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC0.78□□□□□ -2.29
SYNE1Q8NF91 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC0.78□□□□□ -2.29
SYNE1Q8NF91 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC0.78□□□□□ -2.29
SYNE1Q8NF91 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC0.78□□□□□ -2.29
SYNE1Q8NF91 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC0.78□□□□□ -2.29
SYNE1Q8NF91 RPL7P10-201ENST00000417407 739 ntBASIC0.78□□□□□ -2.29
SYNE1Q8NF91 ATG10-AS1-201ENST00000504846 648 ntBASIC0.78□□□□□ -2.29
SYNE1Q8NF91 RN7SKP283-201ENST00000517197 270 ntBASIC0.78□□□□□ -2.29
SYNE1Q8NF91 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC0.78□□□□□ -2.29
SYNE1Q8NF91 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC0.78□□□□□ -2.29
SYNE1Q8NF91 ZNF192P1-203ENST00000565888 810 ntBASIC0.78□□□□□ -2.29
SYNE1Q8NF91 AP005136.1-201ENST00000579765 429 ntBASIC0.78□□□□□ -2.29
SYNE1Q8NF91 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC0.78□□□□□ -2.29
SYNE1Q8NF91 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC0.78□□□□□ -2.29
SYNE1Q8NF91 AC006020.1-201ENST00000420179 1854 ntBASIC0.78□□□□□ -2.29
SYNE1Q8NF91 XPOTP1-201ENST00000443317 2398 ntBASIC0.78□□□□□ -2.29
SYNE1Q8NF91 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC0.78□□□□□ -2.29
SYNE1Q8NF91 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC0.77□□□□□ -2.29
SYNE1Q8NF91 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC0.77□□□□□ -2.29
SYNE1Q8NF91 RNU6-697P-201ENST00000363348 107 ntBASIC0.77□□□□□ -2.29
SYNE1Q8NF91 RNA5SP88-201ENST00000365560 109 ntBASIC0.77□□□□□ -2.29
SYNE1Q8NF91 PTP4A1P7-201ENST00000423476 514 ntBASIC0.77□□□□□ -2.29
SYNE1Q8NF91 Z98742.2-201ENST00000431564 187 ntBASIC0.77□□□□□ -2.29
SYNE1Q8NF91 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC0.77□□□□□ -2.29
SYNE1Q8NF91 AC091917.2-201ENST00000505002 744 ntBASIC0.77□□□□□ -2.29
SYNE1Q8NF91 C5orf46-203ENST00000515291 573 ntAPPRIS ALT1 TSL 1 (best) BASIC0.77□□□□□ -2.29
SYNE1Q8NF91 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC0.77□□□□□ -2.29
SYNE1Q8NF91 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC0.77□□□□□ -2.29
SYNE1Q8NF91 AC016877.3-201ENST00000606778 504 ntBASIC0.77□□□□□ -2.29
SYNE1Q8NF91 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC0.77□□□□□ -2.29
SYNE1Q8NF91 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC0.77□□□□□ -2.29
SYNE1Q8NF91 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC0.77□□□□□ -2.29
SYNE1Q8NF91 ZNF658B-202ENST00000615961 3375 ntBASIC0.77□□□□□ -2.29
SYNE1Q8NF91 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC0.77□□□□□ -2.29
SYNE1Q8NF91 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC0.77□□□□□ -2.29
SYNE1Q8NF91 Y_RNA.112-201ENST00000363250 102 ntBASIC0.77□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 88 ms