Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
SIX5Q8N196 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
SIX5Q8N196 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC5.92□□□□□ -1.46
SIX5Q8N196 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC5.92□□□□□ -1.46
SIX5Q8N196 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC5.92□□□□□ -1.46
SIX5Q8N196 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
SIX5Q8N196 RPL23P2-201ENST00000320371 421 ntBASIC5.92□□□□□ -1.46
SIX5Q8N196 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
SIX5Q8N196 RNA5-8SP7-201ENST00000363443 155 ntBASIC5.92□□□□□ -1.46
SIX5Q8N196 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
SIX5Q8N196 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC5.92□□□□□ -1.46
SIX5Q8N196 RNU6-890P-201ENST00000384121 107 ntBASIC5.92□□□□□ -1.46
SIX5Q8N196 MIR1250-201ENST00000408098 113 ntBASIC5.92□□□□□ -1.46
SIX5Q8N196 RNU6ATAC18P-201ENST00000408413 101 ntBASIC5.92□□□□□ -1.46
SIX5Q8N196 MIR548F4-201ENST00000408515 105 ntBASIC5.92□□□□□ -1.46
SIX5Q8N196 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC5.92□□□□□ -1.46
SIX5Q8N196 TRAPPC2P10-201ENST00000415662 323 ntBASIC5.92□□□□□ -1.46
SIX5Q8N196 FAR2P4-202ENST00000425399 584 ntBASIC5.92□□□□□ -1.46
SIX5Q8N196 AC008065.1-201ENST00000428525 348 ntBASIC5.92□□□□□ -1.46
SIX5Q8N196 CYCSP6-201ENST00000434498 302 ntBASIC5.92□□□□□ -1.46
SIX5Q8N196 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC5.92□□□□□ -1.46
SIX5Q8N196 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC5.92□□□□□ -1.46
SIX5Q8N196 AL731563.1-201ENST00000442202 214 ntBASIC5.92□□□□□ -1.46
SIX5Q8N196 AC023141.8-201ENST00000442554 208 ntBASIC5.92□□□□□ -1.46
SIX5Q8N196 AC007967.1-201ENST00000455422 1159 ntBASIC5.92□□□□□ -1.46
SIX5Q8N196 RPS21P4-201ENST00000487122 248 ntBASIC5.92□□□□□ -1.46
SIX5Q8N196 AC015911.1-201ENST00000495111 156 ntBASIC5.92□□□□□ -1.46
SIX5Q8N196 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC5.92□□□□□ -1.46
SIX5Q8N196 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC5.92□□□□□ -1.46
SIX5Q8N196 AC116337.1-201ENST00000509680 687 ntBASIC5.92□□□□□ -1.46
SIX5Q8N196 MEPE-206ENST00000511670 550 ntTSL 4 BASIC5.92□□□□□ -1.46
SIX5Q8N196 AC026801.2-201ENST00000515352 425 ntBASIC5.92□□□□□ -1.46
SIX5Q8N196 RN7SKP82-201ENST00000516786 223 ntBASIC5.92□□□□□ -1.46
SIX5Q8N196 Y_RNA.708-201ENST00000516950 96 ntBASIC5.92□□□□□ -1.46
SIX5Q8N196 STX3-204ENST00000530221 534 ntTSL 5 BASIC5.92□□□□□ -1.46
SIX5Q8N196 OR5AP2-201ENST00000544374 1006 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
SIX5Q8N196 AL121576.1-201ENST00000556055 276 ntBASIC5.92□□□□□ -1.46
SIX5Q8N196 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC5.92□□□□□ -1.46
SIX5Q8N196 MIR4436B2-201ENST00000581415 91 ntBASIC5.92□□□□□ -1.46
SIX5Q8N196 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
SIX5Q8N196 MIR4436B1-201ENST00000583272 91 ntBASIC5.92□□□□□ -1.46
SIX5Q8N196 AC006254.3-201ENST00000603353 884 ntBASIC5.92□□□□□ -1.46
SIX5Q8N196 AC091193.1-201ENST00000604640 448 ntBASIC5.92□□□□□ -1.46
SIX5Q8N196 AC010680.4-201ENST00000605334 543 ntBASIC5.92□□□□□ -1.46
SIX5Q8N196 AC100827.5-201ENST00000615883 426 ntBASIC5.92□□□□□ -1.46
SIX5Q8N196 U4.1-201ENST00000620349 87 ntBASIC5.92□□□□□ -1.46
SIX5Q8N196 AL596275.2-204ENST00000641628 552 ntBASIC5.92□□□□□ -1.46
SIX5Q8N196 AL596275.2-206ENST00000641957 626 ntBASIC5.92□□□□□ -1.46
SIX5Q8N196 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC5.92□□□□□ -1.46
SIX5Q8N196 UGGT1-201ENST00000259253 10650 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
SIX5Q8N196 TESPA1-212ENST00000532804 2000 ntAPPRIS ALT2 TSL 5 BASIC5.92□□□□□ -1.46
SIX5Q8N196 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC5.92□□□□□ -1.46
SIX5Q8N196 AL731556.1-201ENST00000394628 3711 ntBASIC5.92□□□□□ -1.46
SIX5Q8N196 AC109446.4-201ENST00000623235 2755 ntBASIC5.92□□□□□ -1.46
SIX5Q8N196 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
SIX5Q8N196 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
SIX5Q8N196 AC116667.1-201ENST00000604855 2072 ntBASIC5.92□□□□□ -1.46
SIX5Q8N196 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
SIX5Q8N196 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
SIX5Q8N196 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
SIX5Q8N196 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC5.91□□□□□ -1.46
SIX5Q8N196 GTF3C3-202ENST00000409364 1736 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
SIX5Q8N196 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC5.91□□□□□ -1.46
SIX5Q8N196 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
SIX5Q8N196 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC5.91□□□□□ -1.46
SIX5Q8N196 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
SIX5Q8N196 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC5.91□□□□□ -1.46
SIX5Q8N196 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC5.91□□□□□ -1.46
SIX5Q8N196 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
SIX5Q8N196 U8.4-201ENST00000363626 134 ntBASIC5.91□□□□□ -1.46
SIX5Q8N196 RNU6-128P-201ENST00000383976 107 ntBASIC5.91□□□□□ -1.46
SIX5Q8N196 RNU6-505P-201ENST00000384427 107 ntBASIC5.91□□□□□ -1.46
SIX5Q8N196 RNU6-146P-201ENST00000384602 108 ntBASIC5.91□□□□□ -1.46
SIX5Q8N196 RNU1-77P-201ENST00000390868 162 ntBASIC5.91□□□□□ -1.46
SIX5Q8N196 RNU6-821P-201ENST00000390995 107 ntBASIC5.91□□□□□ -1.46
SIX5Q8N196 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC5.91□□□□□ -1.46
SIX5Q8N196 AL391219.1-201ENST00000422570 483 ntBASIC5.91□□□□□ -1.46
SIX5Q8N196 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC5.91□□□□□ -1.46
SIX5Q8N196 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC5.91□□□□□ -1.46
SIX5Q8N196 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC5.91□□□□□ -1.46
SIX5Q8N196 RPS12P17-201ENST00000438591 377 ntBASIC5.91□□□□□ -1.46
SIX5Q8N196 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC5.91□□□□□ -1.46
SIX5Q8N196 AC073850.1-201ENST00000449243 255 ntBASIC5.91□□□□□ -1.46
SIX5Q8N196 RPL12P25-201ENST00000455592 494 ntBASIC5.91□□□□□ -1.46
SIX5Q8N196 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC5.91□□□□□ -1.46
SIX5Q8N196 PGAM1P13-201ENST00000507497 754 ntBASIC5.91□□□□□ -1.46
SIX5Q8N196 RNU6-123P-201ENST00000516163 102 ntBASIC5.91□□□□□ -1.46
SIX5Q8N196 RNU6-941P-201ENST00000516346 108 ntBASIC5.91□□□□□ -1.46
SIX5Q8N196 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC5.91□□□□□ -1.46
SIX5Q8N196 IL7-206ENST00000520269 456 ntTSL 3 BASIC5.91□□□□□ -1.46
SIX5Q8N196 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC5.91□□□□□ -1.46
SIX5Q8N196 MTCO3P23-201ENST00000561363 289 ntBASIC5.91□□□□□ -1.46
SIX5Q8N196 MRPS21P7-201ENST00000566937 238 ntBASIC5.91□□□□□ -1.46
SIX5Q8N196 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC5.91□□□□□ -1.46
SIX5Q8N196 MIR3691-201ENST00000578066 90 ntBASIC5.91□□□□□ -1.46
SIX5Q8N196 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC5.91□□□□□ -1.46
SIX5Q8N196 TUG1_2.1-201ENST00000614234 87 ntBASIC5.91□□□□□ -1.46
SIX5Q8N196 AC110801.1-201ENST00000623590 212 ntBASIC5.91□□□□□ -1.46
SIX5Q8N196 AC092608.2-201ENST00000624427 218 ntBASIC5.91□□□□□ -1.46
SIX5Q8N196 Z69720.2-201ENST00000624755 279 ntBASIC5.91□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 179.6 ms