Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC3.12□□□□□ -1.91
C9orf40Q8IXQ3 MIR4276-201ENST00000584832 70 ntBASIC3.12□□□□□ -1.91
C9orf40Q8IXQ3 AP001269.3-201ENST00000588718 329 ntBASIC3.12□□□□□ -1.91
C9orf40Q8IXQ3 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC3.12□□□□□ -1.91
C9orf40Q8IXQ3 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC3.12□□□□□ -1.91
C9orf40Q8IXQ3 AP001521.1-201ENST00000609150 300 ntBASIC3.12□□□□□ -1.91
C9orf40Q8IXQ3 AC008083.4-201ENST00000615076 444 ntBASIC3.12□□□□□ -1.91
C9orf40Q8IXQ3 AC231759.1-201ENST00000616455 597 ntBASIC3.12□□□□□ -1.91
C9orf40Q8IXQ3 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC3.12□□□□□ -1.91
C9orf40Q8IXQ3 AC023510.2-201ENST00000622162 746 ntBASIC3.12□□□□□ -1.91
C9orf40Q8IXQ3 AC068787.1-201ENST00000623908 691 ntBASIC3.12□□□□□ -1.91
C9orf40Q8IXQ3 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC3.12□□□□□ -1.91
C9orf40Q8IXQ3 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC3.12□□□□□ -1.91
C9orf40Q8IXQ3 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
C9orf40Q8IXQ3 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC3.12□□□□□ -1.91
C9orf40Q8IXQ3 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.12□□□□□ -1.91
C9orf40Q8IXQ3 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
C9orf40Q8IXQ3 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.12□□□□□ -1.91
C9orf40Q8IXQ3 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC3.12□□□□□ -1.91
C9orf40Q8IXQ3 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.11□□□□□ -1.91
C9orf40Q8IXQ3 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
C9orf40Q8IXQ3 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.11□□□□□ -1.91
C9orf40Q8IXQ3 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.11□□□□□ -1.91
C9orf40Q8IXQ3 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
C9orf40Q8IXQ3 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
C9orf40Q8IXQ3 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC3.11□□□□□ -1.91
C9orf40Q8IXQ3 RNU6-560P-201ENST00000364007 108 ntBASIC3.11□□□□□ -1.91
C9orf40Q8IXQ3 SNORD116.1-201ENST00000365628 92 ntBASIC3.11□□□□□ -1.91
C9orf40Q8IXQ3 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC3.11□□□□□ -1.91
C9orf40Q8IXQ3 SNORA51.6-201ENST00000384151 125 ntBASIC3.11□□□□□ -1.91
C9orf40Q8IXQ3 RNU6-636P-201ENST00000384598 107 ntBASIC3.11□□□□□ -1.91
C9orf40Q8IXQ3 RNU6-1242P-201ENST00000391052 103 ntBASIC3.11□□□□□ -1.91
C9orf40Q8IXQ3 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
C9orf40Q8IXQ3 RNA5SP44-201ENST00000410446 133 ntBASIC3.11□□□□□ -1.91
C9orf40Q8IXQ3 AC092832.1-201ENST00000422934 400 ntBASIC3.11□□□□□ -1.91
C9orf40Q8IXQ3 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
C9orf40Q8IXQ3 HSFY1P1-201ENST00000423928 1178 ntBASIC3.11□□□□□ -1.91
C9orf40Q8IXQ3 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC3.11□□□□□ -1.91
C9orf40Q8IXQ3 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC3.11□□□□□ -1.91
C9orf40Q8IXQ3 USP9YP31-201ENST00000431405 881 ntBASIC3.11□□□□□ -1.91
C9orf40Q8IXQ3 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC3.11□□□□□ -1.91
C9orf40Q8IXQ3 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC3.11□□□□□ -1.91
C9orf40Q8IXQ3 AC004022.1-201ENST00000447766 1066 ntBASIC3.11□□□□□ -1.91
C9orf40Q8IXQ3 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC3.11□□□□□ -1.91
C9orf40Q8IXQ3 PLGLA-201ENST00000465668 449 ntBASIC3.11□□□□□ -1.91
C9orf40Q8IXQ3 AC087312.1-201ENST00000471411 480 ntBASIC3.11□□□□□ -1.91
C9orf40Q8IXQ3 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
C9orf40Q8IXQ3 RPL7P38-201ENST00000488396 739 ntBASIC3.11□□□□□ -1.91
C9orf40Q8IXQ3 OR4G11P-201ENST00000492842 939 ntBASIC3.11□□□□□ -1.91
C9orf40Q8IXQ3 AC020893.1-201ENST00000502452 580 ntBASIC3.11□□□□□ -1.91
C9orf40Q8IXQ3 HSPD1P15-201ENST00000505573 1122 ntBASIC3.11□□□□□ -1.91
C9orf40Q8IXQ3 TXNP6-201ENST00000510190 310 ntBASIC3.11□□□□□ -1.91
C9orf40Q8IXQ3 AC074250.1-201ENST00000511117 192 ntBASIC3.11□□□□□ -1.91
C9orf40Q8IXQ3 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC3.11□□□□□ -1.91
C9orf40Q8IXQ3 AC110760.3-202ENST00000515177 371 ntBASIC3.11□□□□□ -1.91
C9orf40Q8IXQ3 Vault.1-201ENST00000516474 102 ntBASIC3.11□□□□□ -1.91
C9orf40Q8IXQ3 RNU4ATAC10P-201ENST00000516967 122 ntBASIC3.11□□□□□ -1.91
C9orf40Q8IXQ3 AC093331.1-201ENST00000521474 169 ntBASIC3.11□□□□□ -1.91
C9orf40Q8IXQ3 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC3.11□□□□□ -1.91
C9orf40Q8IXQ3 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC3.11□□□□□ -1.91
C9orf40Q8IXQ3 AC005832.3-201ENST00000537929 631 ntBASIC3.11□□□□□ -1.91
C9orf40Q8IXQ3 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
C9orf40Q8IXQ3 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
C9orf40Q8IXQ3 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC3.11□□□□□ -1.91
C9orf40Q8IXQ3 AL132657.2-201ENST00000564417 358 ntBASIC3.11□□□□□ -1.91
C9orf40Q8IXQ3 MIR3944-201ENST00000581277 108 ntBASIC3.11□□□□□ -1.91
C9orf40Q8IXQ3 AL450336.1-201ENST00000605180 586 ntBASIC3.11□□□□□ -1.91
C9orf40Q8IXQ3 HMGN2P28-201ENST00000606102 262 ntBASIC3.11□□□□□ -1.91
C9orf40Q8IXQ3 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC3.11□□□□□ -1.91
C9orf40Q8IXQ3 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC3.11□□□□□ -1.91
C9orf40Q8IXQ3 RDM1-219ENST00000615378 542 ntTSL 3 BASIC3.11□□□□□ -1.91
C9orf40Q8IXQ3 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC3.11□□□□□ -1.91
C9orf40Q8IXQ3 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.11□□□□□ -1.91
C9orf40Q8IXQ3 AC009318.4-201ENST00000620496 486 ntBASIC3.11□□□□□ -1.91
C9orf40Q8IXQ3 AC092184.1-201ENST00000625042 715 ntBASIC3.11□□□□□ -1.91
C9orf40Q8IXQ3 AP001002.2-201ENST00000625137 386 ntBASIC3.11□□□□□ -1.91
C9orf40Q8IXQ3 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC3.11□□□□□ -1.91
C9orf40Q8IXQ3 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.11□□□□□ -1.91
C9orf40Q8IXQ3 ZNF542P-204ENST00000482727 1305 ntBASIC3.11□□□□□ -1.91
C9orf40Q8IXQ3 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC3.11□□□□□ -1.91
C9orf40Q8IXQ3 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.11□□□□□ -1.91
C9orf40Q8IXQ3 ZNF826P-207ENST00000622273 1910 ntBASIC3.11□□□□□ -1.91
C9orf40Q8IXQ3 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.11□□□□□ -1.91
C9orf40Q8IXQ3 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.11□□□□□ -1.91
C9orf40Q8IXQ3 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.1□□□□□ -1.91
C9orf40Q8IXQ3 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC3.1□□□□□ -1.91
C9orf40Q8IXQ3 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
C9orf40Q8IXQ3 OSBPL9P4-201ENST00000371707 1800 ntBASIC3.1□□□□□ -1.91
C9orf40Q8IXQ3 CR383658.2-201ENST00000547576 1525 ntBASIC3.1□□□□□ -1.91
C9orf40Q8IXQ3 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC3.1□□□□□ -1.91
C9orf40Q8IXQ3 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC3.1□□□□□ -1.91
C9orf40Q8IXQ3 RNU4-92P-201ENST00000363783 136 ntBASIC3.1□□□□□ -1.91
C9orf40Q8IXQ3 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC3.1□□□□□ -1.91
C9orf40Q8IXQ3 Y_RNA.408-201ENST00000383987 102 ntBASIC3.1□□□□□ -1.91
C9orf40Q8IXQ3 Y_RNA.493-201ENST00000384422 102 ntBASIC3.1□□□□□ -1.91
C9orf40Q8IXQ3 MIR506-201ENST00000384998 124 ntBASIC3.1□□□□□ -1.91
C9orf40Q8IXQ3 AL024474.1-201ENST00000404655 591 ntBASIC3.1□□□□□ -1.91
C9orf40Q8IXQ3 AL590084.1-201ENST00000407885 387 ntBASIC3.1□□□□□ -1.91
C9orf40Q8IXQ3 RNA5SP80-201ENST00000410475 111 ntBASIC3.1□□□□□ -1.91
C9orf40Q8IXQ3 RNA5SP293-201ENST00000410527 113 ntBASIC3.1□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 92.2 ms