Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 RNU6-387P-201ENST00000411331 105 ntBASIC5.65□□□□□ -1.5
NPAS4Q8IUM7 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC5.65□□□□□ -1.5
NPAS4Q8IUM7 TEX41-205ENST00000431734 529 ntTSL 4 BASIC5.65□□□□□ -1.5
NPAS4Q8IUM7 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC5.65□□□□□ -1.5
NPAS4Q8IUM7 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC5.65□□□□□ -1.5
NPAS4Q8IUM7 RPL7P12-201ENST00000446719 750 ntBASIC5.65□□□□□ -1.5
NPAS4Q8IUM7 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
NPAS4Q8IUM7 RPS29P15-201ENST00000458329 171 ntBASIC5.65□□□□□ -1.5
NPAS4Q8IUM7 AC006463.2-201ENST00000473326 348 ntBASIC5.65□□□□□ -1.5
NPAS4Q8IUM7 SRP72-202ENST00000504757 745 ntTSL 2 BASIC5.65□□□□□ -1.5
NPAS4Q8IUM7 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC5.65□□□□□ -1.5
NPAS4Q8IUM7 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC5.65□□□□□ -1.5
NPAS4Q8IUM7 SCARNA20.4-201ENST00000516969 131 ntBASIC5.65□□□□□ -1.5
NPAS4Q8IUM7 DEFB109D-201ENST00000529497 240 ntBASIC5.65□□□□□ -1.5
NPAS4Q8IUM7 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC5.65□□□□□ -1.5
NPAS4Q8IUM7 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
NPAS4Q8IUM7 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC5.65□□□□□ -1.5
NPAS4Q8IUM7 MIR4293-201ENST00000584305 78 ntBASIC5.65□□□□□ -1.5
NPAS4Q8IUM7 HMGB2P1-201ENST00000591146 634 ntBASIC5.65□□□□□ -1.5
NPAS4Q8IUM7 AC012443.1-201ENST00000605605 231 ntBASIC5.65□□□□□ -1.5
NPAS4Q8IUM7 AC244107.2-201ENST00000611773 76 ntBASIC5.65□□□□□ -1.5
NPAS4Q8IUM7 AL627230.1-201ENST00000613077 211 ntBASIC5.65□□□□□ -1.5
NPAS4Q8IUM7 AL591926.8-201ENST00000616876 211 ntBASIC5.65□□□□□ -1.5
NPAS4Q8IUM7 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC5.65□□□□□ -1.5
NPAS4Q8IUM7 RMST_7.1-201ENST00000621935 268 ntBASIC5.65□□□□□ -1.5
NPAS4Q8IUM7 AC006065.5-201ENST00000623427 349 ntBASIC5.65□□□□□ -1.5
NPAS4Q8IUM7 MIR6715B-201ENST00000637172 77 ntBASIC5.65□□□□□ -1.5
NPAS4Q8IUM7 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
NPAS4Q8IUM7 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
NPAS4Q8IUM7 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC5.65□□□□□ -1.51
NPAS4Q8IUM7 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
NPAS4Q8IUM7 AC004972.1-201ENST00000623934 2209 ntBASIC5.64□□□□□ -1.51
NPAS4Q8IUM7 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
NPAS4Q8IUM7 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
NPAS4Q8IUM7 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC5.64□□□□□ -1.51
NPAS4Q8IUM7 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
NPAS4Q8IUM7 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
NPAS4Q8IUM7 BDP1P-201ENST00000582658 1990 ntBASIC5.64□□□□□ -1.51
NPAS4Q8IUM7 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
NPAS4Q8IUM7 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC5.64□□□□□ -1.51
NPAS4Q8IUM7 AC092681.1-201ENST00000297369 291 ntBASIC5.64□□□□□ -1.51
NPAS4Q8IUM7 MAX-203ENST00000341653 330 ntTSL 2 BASIC5.64□□□□□ -1.51
NPAS4Q8IUM7 RNU6-960P-201ENST00000364056 120 ntBASIC5.64□□□□□ -1.51
NPAS4Q8IUM7 RNA5SP90-201ENST00000364801 99 ntBASIC5.64□□□□□ -1.51
NPAS4Q8IUM7 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
NPAS4Q8IUM7 PPIAP9-201ENST00000403866 498 ntBASIC5.64□□□□□ -1.51
NPAS4Q8IUM7 FAR2P2-201ENST00000413041 594 ntBASIC5.64□□□□□ -1.51
NPAS4Q8IUM7 CHEK2P3-201ENST00000416118 248 ntBASIC5.64□□□□□ -1.51
NPAS4Q8IUM7 MTCYBP8-201ENST00000422855 651 ntBASIC5.64□□□□□ -1.51
NPAS4Q8IUM7 RAC1P6-201ENST00000423911 575 ntBASIC5.64□□□□□ -1.51
NPAS4Q8IUM7 FAR2P4-202ENST00000425399 584 ntBASIC5.64□□□□□ -1.51
NPAS4Q8IUM7 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC5.64□□□□□ -1.51
NPAS4Q8IUM7 AC024082.2-201ENST00000434771 238 ntBASIC5.64□□□□□ -1.51
NPAS4Q8IUM7 RPL23AP43-201ENST00000446445 471 ntBASIC5.64□□□□□ -1.51
NPAS4Q8IUM7 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC5.64□□□□□ -1.51
NPAS4Q8IUM7 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC5.64□□□□□ -1.51
NPAS4Q8IUM7 RPL23AP55-201ENST00000498163 452 ntBASIC5.64□□□□□ -1.51
NPAS4Q8IUM7 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC5.64□□□□□ -1.51
NPAS4Q8IUM7 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC5.64□□□□□ -1.51
NPAS4Q8IUM7 OR51K1P-201ENST00000510214 950 ntBASIC5.64□□□□□ -1.51
NPAS4Q8IUM7 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC5.64□□□□□ -1.51
NPAS4Q8IUM7 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC5.64□□□□□ -1.51
NPAS4Q8IUM7 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC5.64□□□□□ -1.51
NPAS4Q8IUM7 AC018630.1-201ENST00000541376 925 ntBASIC5.64□□□□□ -1.51
NPAS4Q8IUM7 AC126177.3-201ENST00000551839 688 ntBASIC5.64□□□□□ -1.51
NPAS4Q8IUM7 CLMN-206ENST00000556441 452 ntTSL 5 BASIC5.64□□□□□ -1.51
NPAS4Q8IUM7 AC092132.1-201ENST00000570859 352 ntTSL 3 BASIC5.64□□□□□ -1.51
NPAS4Q8IUM7 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC5.64□□□□□ -1.51
NPAS4Q8IUM7 AF038458.1-201ENST00000588406 262 ntBASIC5.64□□□□□ -1.51
NPAS4Q8IUM7 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
NPAS4Q8IUM7 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC5.64□□□□□ -1.51
NPAS4Q8IUM7 Z98949.1-204ENST00000595102 731 ntTSL 5 BASIC5.64□□□□□ -1.51
NPAS4Q8IUM7 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC5.64□□□□□ -1.51
NPAS4Q8IUM7 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC5.64□□□□□ -1.51
NPAS4Q8IUM7 AC239809.3-208ENST00000611452 531 ntTSL 5 BASIC5.64□□□□□ -1.51
NPAS4Q8IUM7 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC5.64□□□□□ -1.51
NPAS4Q8IUM7 LRRN3-201ENST00000308478 3099 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
NPAS4Q8IUM7 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
NPAS4Q8IUM7 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
NPAS4Q8IUM7 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC5.64□□□□□ -1.51
NPAS4Q8IUM7 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC5.64□□□□□ -1.51
NPAS4Q8IUM7 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC5.64□□□□□ -1.51
NPAS4Q8IUM7 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC5.64□□□□□ -1.51
NPAS4Q8IUM7 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
NPAS4Q8IUM7 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
NPAS4Q8IUM7 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC5.64□□□□□ -1.51
NPAS4Q8IUM7 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
NPAS4Q8IUM7 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC5.63□□□□□ -1.51
NPAS4Q8IUM7 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
NPAS4Q8IUM7 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
NPAS4Q8IUM7 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
NPAS4Q8IUM7 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
NPAS4Q8IUM7 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
NPAS4Q8IUM7 AC006206.1-201ENST00000544842 3387 ntBASIC5.63□□□□□ -1.51
NPAS4Q8IUM7 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC5.63□□□□□ -1.51
NPAS4Q8IUM7 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
NPAS4Q8IUM7 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
NPAS4Q8IUM7 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
NPAS4Q8IUM7 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
NPAS4Q8IUM7 Y_RNA.216-201ENST00000364205 93 ntBASIC5.63□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 122.7 ms