Protein–RNA interactions for Protein: Q7Z494

NPHP3, Nephrocystin-3, humanhuman

Predictions only

Length 1,330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3Q7Z494 CCNB1IP1P3-201ENST00000454702 829 ntBASIC4.1□□□□□ -1.75
NPHP3Q7Z494 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC4.1□□□□□ -1.75
NPHP3Q7Z494 AC015724.1-201ENST00000478577 156 ntBASIC4.1□□□□□ -1.75
NPHP3Q7Z494 TRBV12-1-201ENST00000479785 344 ntBASIC4.1□□□□□ -1.75
NPHP3Q7Z494 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC4.1□□□□□ -1.75
NPHP3Q7Z494 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC4.1□□□□□ -1.75
NPHP3Q7Z494 AC018797.3-201ENST00000513388 1241 ntBASIC4.1□□□□□ -1.75
NPHP3Q7Z494 SNORA19.3-201ENST00000516165 130 ntBASIC4.1□□□□□ -1.75
NPHP3Q7Z494 RN7SKP277-201ENST00000516895 283 ntBASIC4.1□□□□□ -1.75
NPHP3Q7Z494 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC4.1□□□□□ -1.75
NPHP3Q7Z494 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC4.1□□□□□ -1.75
NPHP3Q7Z494 AC011602.1-201ENST00000546484 331 ntBASIC4.1□□□□□ -1.75
NPHP3Q7Z494 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC4.1□□□□□ -1.75
NPHP3Q7Z494 AC107016.2-201ENST00000547968 190 ntBASIC4.1□□□□□ -1.75
NPHP3Q7Z494 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC4.1□□□□□ -1.75
NPHP3Q7Z494 AC095057.3-201ENST00000567102 1157 ntBASIC4.1□□□□□ -1.75
NPHP3Q7Z494 FAM157B-203ENST00000639350 358 ntBASIC4.1□□□□□ -1.75
NPHP3Q7Z494 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
NPHP3Q7Z494 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
NPHP3Q7Z494 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC4.1□□□□□ -1.75
NPHP3Q7Z494 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC4.09□□□□□ -1.75
NPHP3Q7Z494 AC007390.2-201ENST00000606229 3803 ntBASIC4.09□□□□□ -1.75
NPHP3Q7Z494 DCAF13P1-201ENST00000495256 1330 ntBASIC4.09□□□□□ -1.75
NPHP3Q7Z494 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
NPHP3Q7Z494 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.75
NPHP3Q7Z494 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
NPHP3Q7Z494 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
NPHP3Q7Z494 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
NPHP3Q7Z494 CRP-202ENST00000368110 667 ntTSL 3 BASIC4.09□□□□□ -1.75
NPHP3Q7Z494 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
NPHP3Q7Z494 RNU6-298P-201ENST00000390888 96 ntBASIC4.09□□□□□ -1.75
NPHP3Q7Z494 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
NPHP3Q7Z494 RNU6-272P-201ENST00000411028 104 ntBASIC4.09□□□□□ -1.75
NPHP3Q7Z494 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC4.09□□□□□ -1.75
NPHP3Q7Z494 PTP4A1P7-201ENST00000423476 514 ntBASIC4.09□□□□□ -1.75
NPHP3Q7Z494 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC4.09□□□□□ -1.75
NPHP3Q7Z494 ARF4P4-201ENST00000439608 520 ntBASIC4.09□□□□□ -1.75
NPHP3Q7Z494 AC104653.1-202ENST00000446401 390 ntTSL 3 BASIC4.09□□□□□ -1.75
NPHP3Q7Z494 AL513124.1-201ENST00000450410 614 ntBASIC4.09□□□□□ -1.75
NPHP3Q7Z494 AC010401.1-201ENST00000463867 348 ntBASIC4.09□□□□□ -1.75
NPHP3Q7Z494 NIPA2P2-201ENST00000496376 1083 ntBASIC4.09□□□□□ -1.75
NPHP3Q7Z494 AC118942.1-201ENST00000529674 1035 ntBASIC4.09□□□□□ -1.75
NPHP3Q7Z494 AC009097.3-201ENST00000563557 1018 ntBASIC4.09□□□□□ -1.75
NPHP3Q7Z494 AC116096.1-201ENST00000566804 2314 ntBASIC4.09□□□□□ -1.75
NPHP3Q7Z494 AC023824.3-201ENST00000569003 562 ntBASIC4.09□□□□□ -1.75
NPHP3Q7Z494 MIR5047-201ENST00000579212 100 ntBASIC4.09□□□□□ -1.75
NPHP3Q7Z494 AP002906.1-201ENST00000603405 233 ntBASIC4.09□□□□□ -1.75
NPHP3Q7Z494 BNIP3P10-201ENST00000605360 577 ntBASIC4.09□□□□□ -1.75
NPHP3Q7Z494 AP002802.2-201ENST00000605877 235 ntBASIC4.09□□□□□ -1.75
NPHP3Q7Z494 RNU6-1192P-201ENST00000612197 107 ntBASIC4.09□□□□□ -1.75
NPHP3Q7Z494 RNU6-489P-201ENST00000618289 107 ntBASIC4.09□□□□□ -1.75
NPHP3Q7Z494 AC006065.5-201ENST00000623427 349 ntBASIC4.09□□□□□ -1.75
NPHP3Q7Z494 AL109659.3-201ENST00000624985 950 ntBASIC4.09□□□□□ -1.75
NPHP3Q7Z494 AC013437.2-201ENST00000639587 677 ntBASIC4.09□□□□□ -1.75
NPHP3Q7Z494 MTND4P8-201ENST00000514997 1362 ntBASIC4.09□□□□□ -1.76
NPHP3Q7Z494 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
NPHP3Q7Z494 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC4.08□□□□□ -1.76
NPHP3Q7Z494 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
NPHP3Q7Z494 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC4.08□□□□□ -1.76
NPHP3Q7Z494 MIR30E-201ENST00000362104 92 ntBASIC4.08□□□□□ -1.76
NPHP3Q7Z494 U3.12-201ENST00000364498 214 ntBASIC4.08□□□□□ -1.76
NPHP3Q7Z494 RSL24D1P4-201ENST00000400938 484 ntBASIC4.08□□□□□ -1.76
NPHP3Q7Z494 RNA5SP239-201ENST00000410218 129 ntBASIC4.08□□□□□ -1.76
NPHP3Q7Z494 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC4.08□□□□□ -1.76
NPHP3Q7Z494 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC4.08□□□□□ -1.76
NPHP3Q7Z494 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC4.08□□□□□ -1.76
NPHP3Q7Z494 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC4.08□□□□□ -1.76
NPHP3Q7Z494 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC4.08□□□□□ -1.76
NPHP3Q7Z494 NECAP1P2-201ENST00000455668 727 ntBASIC4.08□□□□□ -1.76
NPHP3Q7Z494 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC4.08□□□□□ -1.76
NPHP3Q7Z494 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC4.08□□□□□ -1.76
NPHP3Q7Z494 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC4.08□□□□□ -1.76
NPHP3Q7Z494 AC034159.1-201ENST00000513885 583 ntBASIC4.08□□□□□ -1.76
NPHP3Q7Z494 RNU1-41P-201ENST00000516161 162 ntBASIC4.08□□□□□ -1.76
NPHP3Q7Z494 RNU1-48P-201ENST00000516400 162 ntBASIC4.08□□□□□ -1.76
NPHP3Q7Z494 AC006518.2-201ENST00000542513 940 ntBASIC4.08□□□□□ -1.76
NPHP3Q7Z494 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC4.08□□□□□ -1.76
NPHP3Q7Z494 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC4.08□□□□□ -1.76
NPHP3Q7Z494 AL512310.1-201ENST00000548639 172 ntBASIC4.08□□□□□ -1.76
NPHP3Q7Z494 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC4.08□□□□□ -1.76
NPHP3Q7Z494 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC4.08□□□□□ -1.76
NPHP3Q7Z494 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC4.08□□□□□ -1.76
NPHP3Q7Z494 BNIP3P40-201ENST00000596017 556 ntBASIC4.08□□□□□ -1.76
NPHP3Q7Z494 AC008687.2-201ENST00000597865 520 ntBASIC4.08□□□□□ -1.76
NPHP3Q7Z494 AL606834.3-201ENST00000602615 496 ntBASIC4.08□□□□□ -1.76
NPHP3Q7Z494 AC091057.3-201ENST00000602684 733 ntBASIC4.08□□□□□ -1.76
NPHP3Q7Z494 AC024153.1-201ENST00000603103 365 ntBASIC4.08□□□□□ -1.76
NPHP3Q7Z494 AC105148.1-201ENST00000604961 409 ntBASIC4.08□□□□□ -1.76
NPHP3Q7Z494 AC013468.1-201ENST00000608680 598 ntBASIC4.08□□□□□ -1.76
NPHP3Q7Z494 AC016597.2-201ENST00000613256 341 ntBASIC4.08□□□□□ -1.76
NPHP3Q7Z494 AL590396.4-201ENST00000636779 956 ntBASIC4.08□□□□□ -1.76
NPHP3Q7Z494 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
NPHP3Q7Z494 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
NPHP3Q7Z494 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
NPHP3Q7Z494 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
NPHP3Q7Z494 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC4.08□□□□□ -1.76
NPHP3Q7Z494 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC4.07□□□□□ -1.76
NPHP3Q7Z494 ANKRD36BP1-201ENST00000358576 1779 ntBASIC4.07□□□□□ -1.76
NPHP3Q7Z494 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC4.07□□□□□ -1.76
NPHP3Q7Z494 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC4.07□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 92.4 ms