Protein–RNA interactions for Protein: Q6ZMZ3

SYNE3, Nesprin-3, humanhuman

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3Q6ZMZ3 MIR2114-201ENST00000516645 80 ntBASIC4.4□□□□□ -1.71
SYNE3Q6ZMZ3 SCARNA14-201ENST00000516903 136 ntBASIC4.4□□□□□ -1.71
SYNE3Q6ZMZ3 RN7SKP234-201ENST00000517173 224 ntBASIC4.4□□□□□ -1.71
SYNE3Q6ZMZ3 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC4.4□□□□□ -1.71
SYNE3Q6ZMZ3 AC007954.1-201ENST00000554198 494 ntBASIC4.4□□□□□ -1.71
SYNE3Q6ZMZ3 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC4.4□□□□□ -1.71
SYNE3Q6ZMZ3 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC4.4□□□□□ -1.71
SYNE3Q6ZMZ3 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC4.4□□□□□ -1.71
SYNE3Q6ZMZ3 AC105429.2-201ENST00000610567 517 ntBASIC4.4□□□□□ -1.71
SYNE3Q6ZMZ3 AC009318.4-201ENST00000620496 486 ntBASIC4.4□□□□□ -1.71
SYNE3Q6ZMZ3 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
SYNE3Q6ZMZ3 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC4.4□□□□□ -1.71
SYNE3Q6ZMZ3 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
SYNE3Q6ZMZ3 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
SYNE3Q6ZMZ3 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
SYNE3Q6ZMZ3 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
SYNE3Q6ZMZ3 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
SYNE3Q6ZMZ3 RNU6-462P-201ENST00000362659 105 ntBASIC4.39□□□□□ -1.71
SYNE3Q6ZMZ3 RNU6-433P-201ENST00000363216 104 ntBASIC4.39□□□□□ -1.71
SYNE3Q6ZMZ3 RN7SKP280-201ENST00000364196 304 ntBASIC4.39□□□□□ -1.71
SYNE3Q6ZMZ3 SNORD116-1-201ENST00000384335 95 ntBASIC4.39□□□□□ -1.71
SYNE3Q6ZMZ3 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC4.39□□□□□ -1.71
SYNE3Q6ZMZ3 SNRPEP2-201ENST00000397592 279 ntBASIC4.39□□□□□ -1.71
SYNE3Q6ZMZ3 AL031577.2-201ENST00000404133 280 ntBASIC4.39□□□□□ -1.71
SYNE3Q6ZMZ3 AL138878.1-201ENST00000405131 347 ntBASIC4.39□□□□□ -1.71
SYNE3Q6ZMZ3 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC4.39□□□□□ -1.71
SYNE3Q6ZMZ3 AL365338.1-201ENST00000422282 858 ntBASIC4.39□□□□□ -1.71
SYNE3Q6ZMZ3 OFD1P12Y-201ENST00000427963 1207 ntBASIC4.39□□□□□ -1.71
SYNE3Q6ZMZ3 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC4.39□□□□□ -1.71
SYNE3Q6ZMZ3 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC4.39□□□□□ -1.71
SYNE3Q6ZMZ3 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC4.39□□□□□ -1.71
SYNE3Q6ZMZ3 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC4.39□□□□□ -1.71
SYNE3Q6ZMZ3 AL136126.1-201ENST00000473603 402 ntBASIC4.39□□□□□ -1.71
SYNE3Q6ZMZ3 OR5H5P-201ENST00000503164 928 ntBASIC4.39□□□□□ -1.71
SYNE3Q6ZMZ3 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC4.39□□□□□ -1.71
SYNE3Q6ZMZ3 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC4.39□□□□□ -1.71
SYNE3Q6ZMZ3 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC4.39□□□□□ -1.71
SYNE3Q6ZMZ3 PTP4A1P6-201ENST00000531034 478 ntBASIC4.39□□□□□ -1.71
SYNE3Q6ZMZ3 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC4.39□□□□□ -1.71
SYNE3Q6ZMZ3 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC4.39□□□□□ -1.71
SYNE3Q6ZMZ3 AL133457.1-201ENST00000564251 987 ntBASIC4.39□□□□□ -1.71
SYNE3Q6ZMZ3 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC4.39□□□□□ -1.71
SYNE3Q6ZMZ3 AC141257.3-201ENST00000572906 215 ntBASIC4.39□□□□□ -1.71
SYNE3Q6ZMZ3 AC011260.1-201ENST00000578420 472 ntBASIC4.39□□□□□ -1.71
SYNE3Q6ZMZ3 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC4.39□□□□□ -1.71
SYNE3Q6ZMZ3 AC004987.4-201ENST00000603383 338 ntBASIC4.39□□□□□ -1.71
SYNE3Q6ZMZ3 RPL23AP92-201ENST00000603609 255 ntBASIC4.39□□□□□ -1.71
SYNE3Q6ZMZ3 AC007566.2-201ENST00000603642 413 ntBASIC4.39□□□□□ -1.71
SYNE3Q6ZMZ3 Z94722.1-201ENST00000604328 474 ntBASIC4.39□□□□□ -1.71
SYNE3Q6ZMZ3 AL049634.3-201ENST00000604968 457 ntBASIC4.39□□□□□ -1.71
SYNE3Q6ZMZ3 AC025588.4-201ENST00000615802 908 ntBASIC4.39□□□□□ -1.71
SYNE3Q6ZMZ3 AC091965.5-201ENST00000624785 342 ntBASIC4.39□□□□□ -1.71
SYNE3Q6ZMZ3 TEX41-265ENST00000627785 704 ntTSL 5 BASIC4.39□□□□□ -1.71
SYNE3Q6ZMZ3 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
SYNE3Q6ZMZ3 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC4.39□□□□□ -1.71
SYNE3Q6ZMZ3 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC4.39□□□□□ -1.71
SYNE3Q6ZMZ3 AL359893.1-201ENST00000447628 1580 ntBASIC4.39□□□□□ -1.71
SYNE3Q6ZMZ3 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC4.39□□□□□ -1.71
SYNE3Q6ZMZ3 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
SYNE3Q6ZMZ3 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
SYNE3Q6ZMZ3 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC4.38□□□□□ -1.71
SYNE3Q6ZMZ3 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC4.38□□□□□ -1.71
SYNE3Q6ZMZ3 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
SYNE3Q6ZMZ3 PABPC1P7-201ENST00000413177 1513 ntBASIC4.38□□□□□ -1.71
SYNE3Q6ZMZ3 MTCO1P23-201ENST00000415223 1526 ntBASIC4.38□□□□□ -1.71
SYNE3Q6ZMZ3 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
SYNE3Q6ZMZ3 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
SYNE3Q6ZMZ3 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
SYNE3Q6ZMZ3 RPL21P132-201ENST00000331267 462 ntBASIC4.38□□□□□ -1.71
SYNE3Q6ZMZ3 Y_RNA.18-201ENST00000362461 102 ntBASIC4.38□□□□□ -1.71
SYNE3Q6ZMZ3 Y_RNA.302-201ENST00000364997 102 ntBASIC4.38□□□□□ -1.71
SYNE3Q6ZMZ3 AC016769.3-201ENST00000396562 315 ntBASIC4.38□□□□□ -1.71
SYNE3Q6ZMZ3 AL356967.1-201ENST00000406305 431 ntBASIC4.38□□□□□ -1.71
SYNE3Q6ZMZ3 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC4.38□□□□□ -1.71
SYNE3Q6ZMZ3 AC004987.3-201ENST00000413879 771 ntBASIC4.38□□□□□ -1.71
SYNE3Q6ZMZ3 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC4.38□□□□□ -1.71
SYNE3Q6ZMZ3 OFD1P18Y-201ENST00000420889 959 ntBASIC4.38□□□□□ -1.71
SYNE3Q6ZMZ3 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC4.38□□□□□ -1.71
SYNE3Q6ZMZ3 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC4.38□□□□□ -1.71
SYNE3Q6ZMZ3 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC4.38□□□□□ -1.71
SYNE3Q6ZMZ3 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC4.38□□□□□ -1.71
SYNE3Q6ZMZ3 MTND2P4-201ENST00000445034 1004 ntBASIC4.38□□□□□ -1.71
SYNE3Q6ZMZ3 RPL23AP35-201ENST00000451906 501 ntBASIC4.38□□□□□ -1.71
SYNE3Q6ZMZ3 RPS27AP8-201ENST00000452665 445 ntBASIC4.38□□□□□ -1.71
SYNE3Q6ZMZ3 SYPL1P1-201ENST00000473622 768 ntBASIC4.38□□□□□ -1.71
SYNE3Q6ZMZ3 TMEM251P1-201ENST00000503717 318 ntBASIC4.38□□□□□ -1.71
SYNE3Q6ZMZ3 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC4.38□□□□□ -1.71
SYNE3Q6ZMZ3 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC4.38□□□□□ -1.71
SYNE3Q6ZMZ3 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC4.38□□□□□ -1.71
SYNE3Q6ZMZ3 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC4.38□□□□□ -1.71
SYNE3Q6ZMZ3 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC4.38□□□□□ -1.71
SYNE3Q6ZMZ3 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC4.38□□□□□ -1.71
SYNE3Q6ZMZ3 AC087276.1-201ENST00000529659 480 ntBASIC4.38□□□□□ -1.71
SYNE3Q6ZMZ3 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC4.38□□□□□ -1.71
SYNE3Q6ZMZ3 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC4.38□□□□□ -1.71
SYNE3Q6ZMZ3 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC4.38□□□□□ -1.71
SYNE3Q6ZMZ3 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC4.38□□□□□ -1.71
SYNE3Q6ZMZ3 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC4.38□□□□□ -1.71
SYNE3Q6ZMZ3 AC087499.8-201ENST00000578406 226 ntBASIC4.38□□□□□ -1.71
SYNE3Q6ZMZ3 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 86.1 ms