Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.42□□□□□ -1.86
NHLRC1Q6VVB1 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.42□□□□□ -1.86
NHLRC1Q6VVB1 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
NHLRC1Q6VVB1 THUMPD3P1-201ENST00000506556 1480 ntBASIC3.42□□□□□ -1.86
NHLRC1Q6VVB1 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
NHLRC1Q6VVB1 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.42□□□□□ -1.86
NHLRC1Q6VVB1 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.42□□□□□ -1.86
NHLRC1Q6VVB1 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.42□□□□□ -1.86
NHLRC1Q6VVB1 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
NHLRC1Q6VVB1 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
NHLRC1Q6VVB1 RNU1-64P-201ENST00000365443 163 ntBASIC3.42□□□□□ -1.86
NHLRC1Q6VVB1 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
NHLRC1Q6VVB1 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC3.42□□□□□ -1.86
NHLRC1Q6VVB1 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
NHLRC1Q6VVB1 SOD2P1-201ENST00000396543 562 ntBASIC3.42□□□□□ -1.86
NHLRC1Q6VVB1 HLFP1-201ENST00000402375 499 ntBASIC3.42□□□□□ -1.86
NHLRC1Q6VVB1 RNU2-47P-201ENST00000410649 186 ntBASIC3.42□□□□□ -1.86
NHLRC1Q6VVB1 NAP1L1P2-201ENST00000414182 1089 ntBASIC3.42□□□□□ -1.86
NHLRC1Q6VVB1 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC3.42□□□□□ -1.86
NHLRC1Q6VVB1 SNRPEP4-201ENST00000435815 279 ntBASIC3.42□□□□□ -1.86
NHLRC1Q6VVB1 CR769776.1-201ENST00000441254 787 ntBASIC3.42□□□□□ -1.86
NHLRC1Q6VVB1 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC3.42□□□□□ -1.86
NHLRC1Q6VVB1 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
NHLRC1Q6VVB1 MTCO3P16-201ENST00000454456 754 ntBASIC3.42□□□□□ -1.86
NHLRC1Q6VVB1 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC3.42□□□□□ -1.86
NHLRC1Q6VVB1 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.42□□□□□ -1.86
NHLRC1Q6VVB1 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC3.42□□□□□ -1.86
NHLRC1Q6VVB1 UBDP1-202ENST00000457888 382 ntBASIC3.42□□□□□ -1.86
NHLRC1Q6VVB1 RNU7-136P-201ENST00000458819 69 ntBASIC3.42□□□□□ -1.86
NHLRC1Q6VVB1 RPL21P11-201ENST00000461458 483 ntBASIC3.42□□□□□ -1.86
NHLRC1Q6VVB1 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC3.42□□□□□ -1.86
NHLRC1Q6VVB1 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC3.42□□□□□ -1.86
NHLRC1Q6VVB1 AC110760.3-202ENST00000515177 371 ntBASIC3.42□□□□□ -1.86
NHLRC1Q6VVB1 MTCO1P35-201ENST00000515270 228 ntBASIC3.42□□□□□ -1.86
NHLRC1Q6VVB1 FABP5P12-201ENST00000515543 389 ntBASIC3.42□□□□□ -1.86
NHLRC1Q6VVB1 IGKV2-23-201ENST00000518729 323 ntBASIC3.42□□□□□ -1.86
NHLRC1Q6VVB1 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC3.42□□□□□ -1.86
NHLRC1Q6VVB1 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC3.42□□□□□ -1.86
NHLRC1Q6VVB1 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC3.42□□□□□ -1.86
NHLRC1Q6VVB1 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
NHLRC1Q6VVB1 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC3.42□□□□□ -1.86
NHLRC1Q6VVB1 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC3.42□□□□□ -1.86
NHLRC1Q6VVB1 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC3.42□□□□□ -1.86
NHLRC1Q6VVB1 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC3.42□□□□□ -1.86
NHLRC1Q6VVB1 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC3.42□□□□□ -1.86
NHLRC1Q6VVB1 AP005205.1-201ENST00000563503 508 ntBASIC3.42□□□□□ -1.86
NHLRC1Q6VVB1 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC3.42□□□□□ -1.86
NHLRC1Q6VVB1 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC3.42□□□□□ -1.86
NHLRC1Q6VVB1 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC3.42□□□□□ -1.86
NHLRC1Q6VVB1 AL022099.1-201ENST00000604551 712 ntBASIC3.42□□□□□ -1.86
NHLRC1Q6VVB1 AL137849.1-201ENST00000604767 169 ntBASIC3.42□□□□□ -1.86
NHLRC1Q6VVB1 AC012443.1-201ENST00000605605 231 ntBASIC3.42□□□□□ -1.86
NHLRC1Q6VVB1 AL390208.1-201ENST00000605885 644 ntBASIC3.42□□□□□ -1.86
NHLRC1Q6VVB1 SNORA62.6-201ENST00000606322 83 ntBASIC3.42□□□□□ -1.86
NHLRC1Q6VVB1 AL591424.2-201ENST00000617023 128 ntBASIC3.42□□□□□ -1.86
NHLRC1Q6VVB1 AC091046.2-201ENST00000620775 665 ntBASIC3.42□□□□□ -1.86
NHLRC1Q6VVB1 MIR4275-201ENST00000636486 87 ntBASIC3.42□□□□□ -1.86
NHLRC1Q6VVB1 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC3.42□□□□□ -1.86
NHLRC1Q6VVB1 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC3.42□□□□□ -1.86
NHLRC1Q6VVB1 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
NHLRC1Q6VVB1 AP001486.2-201ENST00000561652 5113 ntBASIC3.42□□□□□ -1.86
NHLRC1Q6VVB1 AL645937.1-201ENST00000641739 1652 ntBASIC3.42□□□□□ -1.86
NHLRC1Q6VVB1 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.42□□□□□ -1.86
NHLRC1Q6VVB1 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.41□□□□□ -1.86
NHLRC1Q6VVB1 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
NHLRC1Q6VVB1 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
NHLRC1Q6VVB1 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.41□□□□□ -1.86
NHLRC1Q6VVB1 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
NHLRC1Q6VVB1 DNASE2B-202ENST00000370665 1269 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
NHLRC1Q6VVB1 PARD3-204ENST00000374768 799 ntTSL 3 BASIC3.41□□□□□ -1.86
NHLRC1Q6VVB1 Y_RNA.408-201ENST00000383987 102 ntBASIC3.41□□□□□ -1.86
NHLRC1Q6VVB1 RNU6-882P-201ENST00000391025 103 ntBASIC3.41□□□□□ -1.86
NHLRC1Q6VVB1 SNORA48.7-201ENST00000391302 135 ntBASIC3.41□□□□□ -1.86
NHLRC1Q6VVB1 DHFRP6-201ENST00000401776 268 ntBASIC3.41□□□□□ -1.86
NHLRC1Q6VVB1 MIR1290-201ENST00000408735 78 ntBASIC3.41□□□□□ -1.86
NHLRC1Q6VVB1 HMGB3P23-201ENST00000414981 585 ntBASIC3.41□□□□□ -1.86
NHLRC1Q6VVB1 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC3.41□□□□□ -1.86
NHLRC1Q6VVB1 RPL21P109-201ENST00000422213 475 ntBASIC3.41□□□□□ -1.86
NHLRC1Q6VVB1 AL953862.1-201ENST00000423016 168 ntBASIC3.41□□□□□ -1.86
NHLRC1Q6VVB1 COX7BP2-201ENST00000437976 242 ntBASIC3.41□□□□□ -1.86
NHLRC1Q6VVB1 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC3.41□□□□□ -1.86
NHLRC1Q6VVB1 MTND3P1-201ENST00000441336 220 ntBASIC3.41□□□□□ -1.86
NHLRC1Q6VVB1 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC3.41□□□□□ -1.86
NHLRC1Q6VVB1 EXTL2P1-201ENST00000446218 416 ntBASIC3.41□□□□□ -1.86
NHLRC1Q6VVB1 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC3.41□□□□□ -1.86
NHLRC1Q6VVB1 AL353691.1-201ENST00000451332 387 ntBASIC3.41□□□□□ -1.86
NHLRC1Q6VVB1 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC3.41□□□□□ -1.86
NHLRC1Q6VVB1 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC3.41□□□□□ -1.86
NHLRC1Q6VVB1 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC3.41□□□□□ -1.86
NHLRC1Q6VVB1 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC3.41□□□□□ -1.86
NHLRC1Q6VVB1 RAC1P2-201ENST00000511164 579 ntBASIC3.41□□□□□ -1.86
NHLRC1Q6VVB1 RNY4P37-201ENST00000516225 96 ntBASIC3.41□□□□□ -1.86
NHLRC1Q6VVB1 RNU6-150P-201ENST00000516237 95 ntBASIC3.41□□□□□ -1.86
NHLRC1Q6VVB1 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC3.41□□□□□ -1.86
NHLRC1Q6VVB1 SUMO2P20-201ENST00000520803 283 ntBASIC3.41□□□□□ -1.86
NHLRC1Q6VVB1 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC3.41□□□□□ -1.86
NHLRC1Q6VVB1 PTS-202ENST00000524931 696 ntTSL 3 BASIC3.41□□□□□ -1.86
NHLRC1Q6VVB1 AC239860.2-201ENST00000525886 270 ntBASIC3.41□□□□□ -1.86
NHLRC1Q6VVB1 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC3.41□□□□□ -1.86
NHLRC1Q6VVB1 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC3.41□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 96.6 ms