Protein–RNA interactions for Protein: Q6STE5

SMARCD3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, humanhuman

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3Q6STE5 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.55□□□□□ -2
SMARCD3Q6STE5 RPL19P1-201ENST00000411635 428 ntBASIC2.55□□□□□ -2
SMARCD3Q6STE5 AL357078.2-201ENST00000416486 427 ntBASIC2.55□□□□□ -2
SMARCD3Q6STE5 AC007161.1-201ENST00000418534 1061 ntTSL 3 BASIC2.55□□□□□ -2
SMARCD3Q6STE5 AC233728.2-201ENST00000425348 757 ntBASIC2.55□□□□□ -2
SMARCD3Q6STE5 MTND4LP14-201ENST00000429447 288 ntBASIC2.55□□□□□ -2
SMARCD3Q6STE5 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC2.55□□□□□ -2
SMARCD3Q6STE5 SNRPEP4-201ENST00000435815 279 ntBASIC2.55□□□□□ -2
SMARCD3Q6STE5 AL590762.3-201ENST00000436372 640 ntBASIC2.55□□□□□ -2
SMARCD3Q6STE5 AL513043.1-201ENST00000439124 535 ntBASIC2.55□□□□□ -2
SMARCD3Q6STE5 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC2.55□□□□□ -2
SMARCD3Q6STE5 LINC01851-201ENST00000443419 637 ntTSL 3 BASIC2.55□□□□□ -2
SMARCD3Q6STE5 AC112492.1-201ENST00000449607 712 ntBASIC2.55□□□□□ -2
SMARCD3Q6STE5 NIPA2P5-201ENST00000452282 464 ntBASIC2.55□□□□□ -2
SMARCD3Q6STE5 RPS24P6-201ENST00000452670 400 ntBASIC2.55□□□□□ -2
SMARCD3Q6STE5 MTND4P21-201ENST00000453886 1357 ntBASIC2.55□□□□□ -2
SMARCD3Q6STE5 RPS29P12-201ENST00000460178 152 ntBASIC2.55□□□□□ -2
SMARCD3Q6STE5 TOPORSLP1-202ENST00000469756 969 ntTSL 3 BASIC2.55□□□□□ -2
SMARCD3Q6STE5 AC003982.1-202ENST00000469928 248 ntBASIC2.55□□□□□ -2
SMARCD3Q6STE5 AC025181.1-201ENST00000477507 416 ntBASIC2.55□□□□□ -2
SMARCD3Q6STE5 AC103975.1-201ENST00000482506 483 ntBASIC2.55□□□□□ -2
SMARCD3Q6STE5 AC104687.1-201ENST00000485829 412 ntBASIC2.55□□□□□ -2
SMARCD3Q6STE5 AC083906.5-201ENST00000503722 328 ntBASIC2.55□□□□□ -2
SMARCD3Q6STE5 AC111193.1-201ENST00000504097 155 ntBASIC2.55□□□□□ -2
SMARCD3Q6STE5 AC108157.1-201ENST00000510511 539 ntBASIC2.55□□□□□ -2
SMARCD3Q6STE5 AC008562.1-201ENST00000521763 330 ntBASIC2.55□□□□□ -2
SMARCD3Q6STE5 COX6B1P6-201ENST00000522347 255 ntBASIC2.55□□□□□ -2
SMARCD3Q6STE5 AC004923.2-201ENST00000529649 369 ntBASIC2.55□□□□□ -2
SMARCD3Q6STE5 AL133271.1-201ENST00000538229 291 ntBASIC2.55□□□□□ -2
SMARCD3Q6STE5 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC2.55□□□□□ -2
SMARCD3Q6STE5 AC125611.2-201ENST00000551907 647 ntBASIC2.55□□□□□ -2
SMARCD3Q6STE5 CKS1BP1-201ENST00000555221 240 ntBASIC2.55□□□□□ -2
SMARCD3Q6STE5 AC012182.1-201ENST00000570133 895 ntBASIC2.55□□□□□ -2
SMARCD3Q6STE5 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC2.55□□□□□ -2
SMARCD3Q6STE5 MIR5195-201ENST00000583555 115 ntBASIC2.55□□□□□ -2
SMARCD3Q6STE5 AP000873.2-201ENST00000602381 406 ntTSL 2 BASIC2.55□□□□□ -2
SMARCD3Q6STE5 AC106791.2-201ENST00000604680 391 ntBASIC2.55□□□□□ -2
SMARCD3Q6STE5 AC110792.4-201ENST00000609843 298 ntBASIC2.55□□□□□ -2
SMARCD3Q6STE5 AL110115.1-201ENST00000614396 364 ntBASIC2.55□□□□□ -2
SMARCD3Q6STE5 AC002076.2-201ENST00000617362 122 ntBASIC2.55□□□□□ -2
SMARCD3Q6STE5 AC006249.1-201ENST00000621223 471 ntBASIC2.55□□□□□ -2
SMARCD3Q6STE5 ASAH1-263ENST00000637872 886 ntTSL 5 BASIC2.55□□□□□ -2
SMARCD3Q6STE5 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC2.54□□□□□ -2
SMARCD3Q6STE5 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
SMARCD3Q6STE5 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.54□□□□□ -2
SMARCD3Q6STE5 SNORA14A-201ENST00000364773 135 ntBASIC2.54□□□□□ -2
SMARCD3Q6STE5 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
SMARCD3Q6STE5 AL356057.1-202ENST00000402263 756 ntBASIC2.54□□□□□ -2
SMARCD3Q6STE5 RNU4-74P-201ENST00000411280 161 ntBASIC2.54□□□□□ -2
SMARCD3Q6STE5 B3GALNT1P1-201ENST00000420569 975 ntBASIC2.54□□□□□ -2
SMARCD3Q6STE5 MTND4P24-201ENST00000424002 397 ntBASIC2.54□□□□□ -2
SMARCD3Q6STE5 RPL36AP6-201ENST00000435770 321 ntBASIC2.54□□□□□ -2
SMARCD3Q6STE5 RPL23AP20-201ENST00000447965 421 ntBASIC2.54□□□□□ -2
SMARCD3Q6STE5 AC104978.1-201ENST00000449387 391 ntBASIC2.54□□□□□ -2
SMARCD3Q6STE5 DCLRE1CP1-201ENST00000454630 470 ntBASIC2.54□□□□□ -2
SMARCD3Q6STE5 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC2.54□□□□□ -2
SMARCD3Q6STE5 snoU13.22-201ENST00000459428 104 ntBASIC2.54□□□□□ -2
SMARCD3Q6STE5 AC008571.1-201ENST00000467232 300 ntBASIC2.54□□□□□ -2
SMARCD3Q6STE5 AC126121.1-201ENST00000482313 553 ntBASIC2.54□□□□□ -2
SMARCD3Q6STE5 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC2.54□□□□□ -2
SMARCD3Q6STE5 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC2.54□□□□□ -2
SMARCD3Q6STE5 SNORA31.20-201ENST00000517111 133 ntBASIC2.54□□□□□ -2
SMARCD3Q6STE5 LY96-202ENST00000518893 430 ntTSL 3 BASIC2.54□□□□□ -2
SMARCD3Q6STE5 HAUS1P3-201ENST00000523909 662 ntBASIC2.54□□□□□ -2
SMARCD3Q6STE5 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC2.54□□□□□ -2
SMARCD3Q6STE5 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC2.54□□□□□ -2
SMARCD3Q6STE5 CASC16-202ENST00000563844 610 ntTSL 3 BASIC2.54□□□□□ -2
SMARCD3Q6STE5 AC107954.1-201ENST00000565906 727 ntBASIC2.54□□□□□ -2
SMARCD3Q6STE5 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC2.54□□□□□ -2
SMARCD3Q6STE5 COX6CP3-201ENST00000580869 223 ntBASIC2.54□□□□□ -2
SMARCD3Q6STE5 ZNF861P-201ENST00000588126 639 ntBASIC2.54□□□□□ -2
SMARCD3Q6STE5 AC040174.2-201ENST00000602701 465 ntBASIC2.54□□□□□ -2
SMARCD3Q6STE5 AC012468.1-201ENST00000604888 430 ntBASIC2.54□□□□□ -2
SMARCD3Q6STE5 AL450270.1-201ENST00000606160 391 ntBASIC2.54□□□□□ -2
SMARCD3Q6STE5 AC242628.1-201ENST00000606810 391 ntBASIC2.54□□□□□ -2
SMARCD3Q6STE5 AC005046.1-201ENST00000608515 625 ntBASIC2.54□□□□□ -2
SMARCD3Q6STE5 AL121904.1-201ENST00000611894 948 ntTSL 5 BASIC2.54□□□□□ -2
SMARCD3Q6STE5 AC004696.1-201ENST00000614345 607 ntBASIC2.54□□□□□ -2
SMARCD3Q6STE5 RBM12B-AS1-201ENST00000623283 653 ntBASIC2.54□□□□□ -2
SMARCD3Q6STE5 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC2.54□□□□□ -2
SMARCD3Q6STE5 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC2.54□□□□□ -2
SMARCD3Q6STE5 PABPC1P7-201ENST00000413177 1513 ntBASIC2.53□□□□□ -2
SMARCD3Q6STE5 ATP6V1G3-202ENST00000309309 678 ntTSL 5 BASIC2.53□□□□□ -2
SMARCD3Q6STE5 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC2.53□□□□□ -2
SMARCD3Q6STE5 SNORA70.4-201ENST00000365509 134 ntBASIC2.53□□□□□ -2
SMARCD3Q6STE5 C1orf146-201ENST00000370373 871 ntTSL 5 BASIC2.53□□□□□ -2
SMARCD3Q6STE5 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC2.53□□□□□ -2
SMARCD3Q6STE5 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
SMARCD3Q6STE5 UBE2V1P15-201ENST00000407776 448 ntBASIC2.53□□□□□ -2
SMARCD3Q6STE5 MIR1303-201ENST00000408625 86 ntBASIC2.53□□□□□ -2
SMARCD3Q6STE5 RNU6ATAC10P-201ENST00000408635 111 ntBASIC2.53□□□□□ -2
SMARCD3Q6STE5 AC019070.1-201ENST00000415008 1024 ntBASIC2.53□□□□□ -2
SMARCD3Q6STE5 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC2.53□□□□□ -2
SMARCD3Q6STE5 RPS20P5-201ENST00000434808 360 ntBASIC2.53□□□□□ -2
SMARCD3Q6STE5 AC093156.1-201ENST00000440382 670 ntBASIC2.53□□□□□ -2
SMARCD3Q6STE5 Z96811.1-201ENST00000445880 108 ntBASIC2.53□□□□□ -2
SMARCD3Q6STE5 MRPL50P4-201ENST00000446432 475 ntBASIC2.53□□□□□ -2
SMARCD3Q6STE5 AC017099.1-201ENST00000448261 1028 ntBASIC2.53□□□□□ -2
SMARCD3Q6STE5 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC2.53□□□□□ -2
SMARCD3Q6STE5 AC016903.2-201ENST00000456384 326 ntTSL 3 BASIC2.53□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 105.5 ms