Protein–RNA interactions for Protein: Q6PJG9

LRFN4, Leucine-rich repeat and fibronectin type-III domain-containing protein 4, humanhuman

Predictions only

Length 635 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN4Q6PJG9 AP003122.3-201ENST00000526316 255 ntBASIC5.08□□□□□ -1.6
LRFN4Q6PJG9 AC027026.1-201ENST00000532323 742 ntBASIC5.08□□□□□ -1.6
LRFN4Q6PJG9 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC5.08□□□□□ -1.6
LRFN4Q6PJG9 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC5.08□□□□□ -1.6
LRFN4Q6PJG9 OR1F2P-201ENST00000570470 933 ntBASIC5.08□□□□□ -1.6
LRFN4Q6PJG9 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC5.08□□□□□ -1.6
LRFN4Q6PJG9 MIR3941-201ENST00000582572 103 ntBASIC5.08□□□□□ -1.6
LRFN4Q6PJG9 MIR4512-201ENST00000583257 77 ntBASIC5.08□□□□□ -1.6
LRFN4Q6PJG9 AC006272.2-201ENST00000594725 163 ntBASIC5.08□□□□□ -1.6
LRFN4Q6PJG9 AC009570.1-201ENST00000609599 745 ntBASIC5.08□□□□□ -1.6
LRFN4Q6PJG9 AC022418.1-201ENST00000624118 445 ntBASIC5.08□□□□□ -1.6
LRFN4Q6PJG9 MIR4496-201ENST00000635896 61 ntBASIC5.08□□□□□ -1.6
LRFN4Q6PJG9 AL596275.2-204ENST00000641628 552 ntBASIC5.08□□□□□ -1.6
LRFN4Q6PJG9 AL596275.2-206ENST00000641957 626 ntBASIC5.08□□□□□ -1.6
LRFN4Q6PJG9 AC083899.1-201ENST00000454465 3819 ntBASIC5.08□□□□□ -1.6
LRFN4Q6PJG9 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC5.08□□□□□ -1.6
LRFN4Q6PJG9 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC5.08□□□□□ -1.6
LRFN4Q6PJG9 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC5.08□□□□□ -1.6
LRFN4Q6PJG9 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC5.08□□□□□ -1.6
LRFN4Q6PJG9 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC5.08□□□□□ -1.6
LRFN4Q6PJG9 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC5.07□□□□□ -1.6
LRFN4Q6PJG9 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
LRFN4Q6PJG9 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
LRFN4Q6PJG9 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
LRFN4Q6PJG9 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
LRFN4Q6PJG9 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
LRFN4Q6PJG9 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
LRFN4Q6PJG9 RNU6-1115P-201ENST00000362490 106 ntBASIC5.07□□□□□ -1.6
LRFN4Q6PJG9 RNU6-562P-201ENST00000362731 107 ntBASIC5.07□□□□□ -1.6
LRFN4Q6PJG9 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
LRFN4Q6PJG9 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
LRFN4Q6PJG9 SMIM11P1-201ENST00000369586 178 ntBASIC5.07□□□□□ -1.6
LRFN4Q6PJG9 AC019155.1-201ENST00000382242 574 ntBASIC5.07□□□□□ -1.6
LRFN4Q6PJG9 Y_RNA.399-201ENST00000383955 105 ntBASIC5.07□□□□□ -1.6
LRFN4Q6PJG9 RNU1-136P-201ENST00000384181 164 ntBASIC5.07□□□□□ -1.6
LRFN4Q6PJG9 MIR1250-201ENST00000408098 113 ntBASIC5.07□□□□□ -1.6
LRFN4Q6PJG9 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC5.07□□□□□ -1.6
LRFN4Q6PJG9 RNU6-985P-201ENST00000410182 104 ntBASIC5.07□□□□□ -1.6
LRFN4Q6PJG9 LINC00701-201ENST00000418295 742 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
LRFN4Q6PJG9 AL139095.3-201ENST00000419672 1203 ntBASIC5.07□□□□□ -1.6
LRFN4Q6PJG9 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC5.07□□□□□ -1.6
LRFN4Q6PJG9 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC5.07□□□□□ -1.6
LRFN4Q6PJG9 AC068631.1-204ENST00000428501 534 ntTSL 3 BASIC5.07□□□□□ -1.6
LRFN4Q6PJG9 MTCYBP9-201ENST00000431021 303 ntBASIC5.07□□□□□ -1.6
LRFN4Q6PJG9 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC5.07□□□□□ -1.6
LRFN4Q6PJG9 MTCO3P45-201ENST00000443036 613 ntBASIC5.07□□□□□ -1.6
LRFN4Q6PJG9 AL162389.1-201ENST00000449233 177 ntBASIC5.07□□□□□ -1.6
LRFN4Q6PJG9 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC5.07□□□□□ -1.6
LRFN4Q6PJG9 MIR2053-201ENST00000459295 91 ntBASIC5.07□□□□□ -1.6
LRFN4Q6PJG9 DYNLL1P5-201ENST00000467158 270 ntBASIC5.07□□□□□ -1.6
LRFN4Q6PJG9 HMGB1P25-201ENST00000468402 607 ntBASIC5.07□□□□□ -1.6
LRFN4Q6PJG9 RPL32P33-201ENST00000487023 394 ntBASIC5.07□□□□□ -1.6
LRFN4Q6PJG9 DUTP1-201ENST00000493631 470 ntBASIC5.07□□□□□ -1.6
LRFN4Q6PJG9 AC008638.1-201ENST00000506035 866 ntBASIC5.07□□□□□ -1.6
LRFN4Q6PJG9 RNU6-1016P-201ENST00000516689 94 ntBASIC5.07□□□□□ -1.6
LRFN4Q6PJG9 RNA5SP271-201ENST00000516700 88 ntBASIC5.07□□□□□ -1.6
LRFN4Q6PJG9 RNU6-1137P-201ENST00000517073 99 ntBASIC5.07□□□□□ -1.6
LRFN4Q6PJG9 AC022790.1-201ENST00000522872 204 ntBASIC5.07□□□□□ -1.6
LRFN4Q6PJG9 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC5.07□□□□□ -1.6
LRFN4Q6PJG9 AC107884.2-201ENST00000530963 550 ntTSL 4 BASIC5.07□□□□□ -1.6
LRFN4Q6PJG9 OR52E8-201ENST00000537935 1061 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
LRFN4Q6PJG9 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC5.07□□□□□ -1.6
LRFN4Q6PJG9 AC090115.3-201ENST00000553218 849 ntBASIC5.07□□□□□ -1.6
LRFN4Q6PJG9 AC092121.1-201ENST00000569452 202 ntBASIC5.07□□□□□ -1.6
LRFN4Q6PJG9 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC5.07□□□□□ -1.6
LRFN4Q6PJG9 MIR4680-201ENST00000580906 66 ntBASIC5.07□□□□□ -1.6
LRFN4Q6PJG9 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
LRFN4Q6PJG9 MIR4503-201ENST00000582187 83 ntBASIC5.07□□□□□ -1.6
LRFN4Q6PJG9 MIR3149-201ENST00000584629 83 ntBASIC5.07□□□□□ -1.6
LRFN4Q6PJG9 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC5.07□□□□□ -1.6
LRFN4Q6PJG9 DUSP12P1-201ENST00000612874 516 ntBASIC5.07□□□□□ -1.6
LRFN4Q6PJG9 TUG1_2.1-201ENST00000614234 87 ntBASIC5.07□□□□□ -1.6
LRFN4Q6PJG9 AL355365.1-201ENST00000616480 294 ntBASIC5.07□□□□□ -1.6
LRFN4Q6PJG9 AL713922.2-201ENST00000619384 716 ntBASIC5.07□□□□□ -1.6
LRFN4Q6PJG9 AL589994.2-201ENST00000621124 579 ntBASIC5.07□□□□□ -1.6
LRFN4Q6PJG9 AC022400.9-201ENST00000623633 273 ntBASIC5.07□□□□□ -1.6
LRFN4Q6PJG9 5S_rRNA.28-201ENST00000638107 119 ntBASIC5.07□□□□□ -1.6
LRFN4Q6PJG9 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC5.07□□□□□ -1.6
LRFN4Q6PJG9 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
LRFN4Q6PJG9 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
LRFN4Q6PJG9 CROT-204ENST00000442291 1993 ntTSL 5 BASIC5.07□□□□□ -1.6
LRFN4Q6PJG9 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
LRFN4Q6PJG9 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
LRFN4Q6PJG9 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC5.07□□□□□ -1.6
LRFN4Q6PJG9 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
LRFN4Q6PJG9 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
LRFN4Q6PJG9 AL451142.2-201ENST00000429076 2090 ntBASIC5.06□□□□□ -1.6
LRFN4Q6PJG9 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
LRFN4Q6PJG9 AC005332.5-201ENST00000591222 2919 ntBASIC5.06□□□□□ -1.6
LRFN4Q6PJG9 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
LRFN4Q6PJG9 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
LRFN4Q6PJG9 SNORD3E-201ENST00000362899 217 ntBASIC5.06□□□□□ -1.6
LRFN4Q6PJG9 RNU1-146P-201ENST00000364015 165 ntBASIC5.06□□□□□ -1.6
LRFN4Q6PJG9 CDC123-202ENST00000378900 933 ntTSL 5 BASIC5.06□□□□□ -1.6
LRFN4Q6PJG9 RNU6-1032P-201ENST00000384100 107 ntBASIC5.06□□□□□ -1.6
LRFN4Q6PJG9 Y_RNA.452-201ENST00000384202 108 ntBASIC5.06□□□□□ -1.6
LRFN4Q6PJG9 MIR130A-201ENST00000385274 89 ntBASIC5.06□□□□□ -1.6
LRFN4Q6PJG9 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
LRFN4Q6PJG9 RNU6-328P-201ENST00000390887 106 ntBASIC5.06□□□□□ -1.6
LRFN4Q6PJG9 Y_RNA.646-201ENST00000410980 101 ntBASIC5.06□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 94.2 ms