Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 RAB28P1-201ENST00000411517 641 ntBASIC3.97□□□□□ -1.77
ZNF549Q6P9A3 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC3.97□□□□□ -1.77
ZNF549Q6P9A3 AC109780.2-201ENST00000413467 845 ntBASIC3.97□□□□□ -1.77
ZNF549Q6P9A3 TMSB4XP6-201ENST00000415187 135 ntBASIC3.97□□□□□ -1.77
ZNF549Q6P9A3 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC3.97□□□□□ -1.77
ZNF549Q6P9A3 MTATP6P27-201ENST00000416987 621 ntBASIC3.97□□□□□ -1.77
ZNF549Q6P9A3 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC3.97□□□□□ -1.77
ZNF549Q6P9A3 AC048351.1-201ENST00000420064 602 ntBASIC3.97□□□□□ -1.77
ZNF549Q6P9A3 MTCYBP24-201ENST00000420387 1106 ntBASIC3.97□□□□□ -1.77
ZNF549Q6P9A3 MTCO3P1-205ENST00000422088 832 ntBASIC3.97□□□□□ -1.77
ZNF549Q6P9A3 TMSB4XP1-201ENST00000424567 135 ntBASIC3.97□□□□□ -1.77
ZNF549Q6P9A3 MTND4P28-201ENST00000426217 387 ntBASIC3.97□□□□□ -1.77
ZNF549Q6P9A3 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC3.97□□□□□ -1.77
ZNF549Q6P9A3 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC3.97□□□□□ -1.77
ZNF549Q6P9A3 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC3.97□□□□□ -1.77
ZNF549Q6P9A3 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC3.97□□□□□ -1.77
ZNF549Q6P9A3 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC3.97□□□□□ -1.77
ZNF549Q6P9A3 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC3.97□□□□□ -1.77
ZNF549Q6P9A3 TBCAP1-201ENST00000436520 327 ntBASIC3.97□□□□□ -1.77
ZNF549Q6P9A3 CBX1P4-201ENST00000439415 457 ntBASIC3.97□□□□□ -1.77
ZNF549Q6P9A3 PGBD4P3-201ENST00000440731 581 ntBASIC3.97□□□□□ -1.77
ZNF549Q6P9A3 AL831737.1-201ENST00000441288 271 ntBASIC3.97□□□□□ -1.77
ZNF549Q6P9A3 GDI2P2-201ENST00000445131 608 ntBASIC3.97□□□□□ -1.77
ZNF549Q6P9A3 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC3.97□□□□□ -1.77
ZNF549Q6P9A3 Z99127.3-201ENST00000448158 395 ntBASIC3.97□□□□□ -1.77
ZNF549Q6P9A3 GAS5-223ENST00000452197 483 ntTSL 3 BASIC3.97□□□□□ -1.77
ZNF549Q6P9A3 RNU6-1218P-201ENST00000458990 108 ntBASIC3.97□□□□□ -1.77
ZNF549Q6P9A3 RN7SL271P-201ENST00000487601 295 ntBASIC3.97□□□□□ -1.77
ZNF549Q6P9A3 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
ZNF549Q6P9A3 AC083829.1-201ENST00000503756 657 ntBASIC3.97□□□□□ -1.77
ZNF549Q6P9A3 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
ZNF549Q6P9A3 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC3.97□□□□□ -1.77
ZNF549Q6P9A3 AC117522.1-201ENST00000509821 380 ntBASIC3.97□□□□□ -1.77
ZNF549Q6P9A3 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC3.97□□□□□ -1.77
ZNF549Q6P9A3 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC3.97□□□□□ -1.77
ZNF549Q6P9A3 COX6B1P6-201ENST00000522347 255 ntBASIC3.97□□□□□ -1.77
ZNF549Q6P9A3 AF279873.1-201ENST00000523393 313 ntBASIC3.97□□□□□ -1.77
ZNF549Q6P9A3 OR4R3P-201ENST00000525084 838 ntBASIC3.97□□□□□ -1.77
ZNF549Q6P9A3 OR6C73P-201ENST00000546432 358 ntBASIC3.97□□□□□ -1.77
ZNF549Q6P9A3 AC025884.1-201ENST00000556034 378 ntBASIC3.97□□□□□ -1.77
ZNF549Q6P9A3 AC141257.3-201ENST00000572906 215 ntBASIC3.97□□□□□ -1.77
ZNF549Q6P9A3 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC3.97□□□□□ -1.77
ZNF549Q6P9A3 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC3.97□□□□□ -1.77
ZNF549Q6P9A3 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC3.97□□□□□ -1.77
ZNF549Q6P9A3 BNIP3P33-201ENST00000598912 569 ntBASIC3.97□□□□□ -1.77
ZNF549Q6P9A3 AC123786.2-201ENST00000603459 275 ntBASIC3.97□□□□□ -1.77
ZNF549Q6P9A3 AL161729.4-201ENST00000604650 476 ntBASIC3.97□□□□□ -1.77
ZNF549Q6P9A3 AP000860.1-201ENST00000605250 559 ntBASIC3.97□□□□□ -1.77
ZNF549Q6P9A3 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC3.97□□□□□ -1.77
ZNF549Q6P9A3 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC3.97□□□□□ -1.77
ZNF549Q6P9A3 AC124864.2-201ENST00000624736 186 ntBASIC3.97□□□□□ -1.77
ZNF549Q6P9A3 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC3.97□□□□□ -1.77
ZNF549Q6P9A3 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
ZNF549Q6P9A3 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC3.97□□□□□ -1.77
ZNF549Q6P9A3 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC3.97□□□□□ -1.77
ZNF549Q6P9A3 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
ZNF549Q6P9A3 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC3.97□□□□□ -1.77
ZNF549Q6P9A3 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
ZNF549Q6P9A3 LINC02471-203ENST00000641941 4752 ntBASIC3.97□□□□□ -1.77
ZNF549Q6P9A3 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC3.96□□□□□ -1.77
ZNF549Q6P9A3 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC3.96□□□□□ -1.77
ZNF549Q6P9A3 OR4G11P-202ENST00000642116 1414 ntBASIC3.96□□□□□ -1.77
ZNF549Q6P9A3 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
ZNF549Q6P9A3 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
ZNF549Q6P9A3 RN7SKP224-201ENST00000364140 325 ntBASIC3.96□□□□□ -1.78
ZNF549Q6P9A3 RNA5SP130-201ENST00000364431 114 ntBASIC3.96□□□□□ -1.78
ZNF549Q6P9A3 OR52E6-202ENST00000379946 954 ntBASIC3.96□□□□□ -1.78
ZNF549Q6P9A3 Y_RNA.450-201ENST00000384198 113 ntBASIC3.96□□□□□ -1.78
ZNF549Q6P9A3 FGF7P8-201ENST00000402994 292 ntBASIC3.96□□□□□ -1.78
ZNF549Q6P9A3 RNU6-272P-201ENST00000411028 104 ntBASIC3.96□□□□□ -1.78
ZNF549Q6P9A3 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC3.96□□□□□ -1.78
ZNF549Q6P9A3 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC3.96□□□□□ -1.78
ZNF549Q6P9A3 HMGB1P11-201ENST00000413899 637 ntBASIC3.96□□□□□ -1.78
ZNF549Q6P9A3 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC3.96□□□□□ -1.78
ZNF549Q6P9A3 USP9YP13-201ENST00000417797 480 ntBASIC3.96□□□□□ -1.78
ZNF549Q6P9A3 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC3.96□□□□□ -1.78
ZNF549Q6P9A3 TRIM60P10Y-201ENST00000425589 751 ntBASIC3.96□□□□□ -1.78
ZNF549Q6P9A3 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
ZNF549Q6P9A3 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC3.96□□□□□ -1.78
ZNF549Q6P9A3 ZYG11AP1-201ENST00000430329 837 ntBASIC3.96□□□□□ -1.78
ZNF549Q6P9A3 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC3.96□□□□□ -1.78
ZNF549Q6P9A3 RPS24P8-201ENST00000431490 402 ntBASIC3.96□□□□□ -1.78
ZNF549Q6P9A3 TRIM60P8Y-201ENST00000436338 762 ntBASIC3.96□□□□□ -1.78
ZNF549Q6P9A3 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC3.96□□□□□ -1.78
ZNF549Q6P9A3 UBE2V1P7-201ENST00000446395 340 ntBASIC3.96□□□□□ -1.78
ZNF549Q6P9A3 TPT1P12-201ENST00000448968 492 ntBASIC3.96□□□□□ -1.78
ZNF549Q6P9A3 PDSS1P2-201ENST00000449397 678 ntBASIC3.96□□□□□ -1.78
ZNF549Q6P9A3 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC3.96□□□□□ -1.78
ZNF549Q6P9A3 AL033528.1-201ENST00000453780 140 ntBASIC3.96□□□□□ -1.78
ZNF549Q6P9A3 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC3.96□□□□□ -1.78
ZNF549Q6P9A3 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC3.96□□□□□ -1.78
ZNF549Q6P9A3 AC010618.1-201ENST00000469924 477 ntBASIC3.96□□□□□ -1.78
ZNF549Q6P9A3 RPS3AP17-201ENST00000472594 777 ntBASIC3.96□□□□□ -1.78
ZNF549Q6P9A3 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC3.96□□□□□ -1.78
ZNF549Q6P9A3 RPL7P24-201ENST00000493052 752 ntBASIC3.96□□□□□ -1.78
ZNF549Q6P9A3 AC069439.1-201ENST00000494739 167 ntBASIC3.96□□□□□ -1.78
ZNF549Q6P9A3 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC3.96□□□□□ -1.78
ZNF549Q6P9A3 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
ZNF549Q6P9A3 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC3.96□□□□□ -1.78
ZNF549Q6P9A3 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC3.96□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 94.6 ms