Protein–RNA interactions for Protein: Q5VTB9

RNF220, E3 ubiquitin-protein ligase RNF220, humanhuman

Predictions only

Length 566 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220Q5VTB9 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC4.34□□□□□ -1.71
RNF220Q5VTB9 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC4.34□□□□□ -1.71
RNF220Q5VTB9 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC4.34□□□□□ -1.71
RNF220Q5VTB9 ARPC3P1-201ENST00000437218 533 ntBASIC4.34□□□□□ -1.71
RNF220Q5VTB9 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC4.34□□□□□ -1.71
RNF220Q5VTB9 RNU7-59P-201ENST00000459101 61 ntBASIC4.34□□□□□ -1.71
RNF220Q5VTB9 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC4.34□□□□□ -1.71
RNF220Q5VTB9 AP000873.1-201ENST00000463987 400 ntBASIC4.34□□□□□ -1.71
RNF220Q5VTB9 AC104763.1-201ENST00000475274 360 ntBASIC4.34□□□□□ -1.71
RNF220Q5VTB9 RPL7AP6-201ENST00000477943 801 ntBASIC4.34□□□□□ -1.71
RNF220Q5VTB9 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC4.34□□□□□ -1.71
RNF220Q5VTB9 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC4.34□□□□□ -1.71
RNF220Q5VTB9 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC4.34□□□□□ -1.71
RNF220Q5VTB9 MTND2P33-201ENST00000506452 1031 ntBASIC4.34□□□□□ -1.71
RNF220Q5VTB9 AC091868.1-201ENST00000508746 304 ntBASIC4.34□□□□□ -1.71
RNF220Q5VTB9 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC4.34□□□□□ -1.71
RNF220Q5VTB9 BTF3P13-201ENST00000513224 490 ntBASIC4.34□□□□□ -1.71
RNF220Q5VTB9 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC4.34□□□□□ -1.71
RNF220Q5VTB9 AC107934.1-201ENST00000522215 217 ntBASIC4.34□□□□□ -1.71
RNF220Q5VTB9 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC4.34□□□□□ -1.71
RNF220Q5VTB9 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC4.34□□□□□ -1.71
RNF220Q5VTB9 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC4.34□□□□□ -1.71
RNF220Q5VTB9 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC4.34□□□□□ -1.71
RNF220Q5VTB9 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC4.34□□□□□ -1.71
RNF220Q5VTB9 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC4.34□□□□□ -1.71
RNF220Q5VTB9 EDDM3DP-201ENST00000554692 434 ntBASIC4.34□□□□□ -1.71
RNF220Q5VTB9 AC009063.1-201ENST00000563342 702 ntBASIC4.34□□□□□ -1.71
RNF220Q5VTB9 AL360157.1-201ENST00000565962 87 ntBASIC4.34□□□□□ -1.71
RNF220Q5VTB9 AC099489.2-201ENST00000574976 260 ntBASIC4.34□□□□□ -1.71
RNF220Q5VTB9 AC005951.1-201ENST00000576706 485 ntBASIC4.34□□□□□ -1.71
RNF220Q5VTB9 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC4.34□□□□□ -1.71
RNF220Q5VTB9 AP2S1-210ENST00000601649 315 ntTSL 3 BASIC4.34□□□□□ -1.71
RNF220Q5VTB9 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC4.34□□□□□ -1.71
RNF220Q5VTB9 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC4.34□□□□□ -1.71
RNF220Q5VTB9 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC4.34□□□□□ -1.71
RNF220Q5VTB9 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC4.34□□□□□ -1.71
RNF220Q5VTB9 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC4.34□□□□□ -1.71
RNF220Q5VTB9 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC4.34□□□□□ -1.71
RNF220Q5VTB9 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC4.34□□□□□ -1.71
RNF220Q5VTB9 AL442639.1-201ENST00000625030 1899 ntBASIC4.34□□□□□ -1.71
RNF220Q5VTB9 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC4.34□□□□□ -1.72
RNF220Q5VTB9 AL136164.3-201ENST00000624429 3978 ntBASIC4.34□□□□□ -1.72
RNF220Q5VTB9 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC4.34□□□□□ -1.72
RNF220Q5VTB9 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
RNF220Q5VTB9 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC4.33□□□□□ -1.72
RNF220Q5VTB9 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
RNF220Q5VTB9 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
RNF220Q5VTB9 AC024560.2-201ENST00000507981 1497 ntBASIC4.33□□□□□ -1.72
RNF220Q5VTB9 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
RNF220Q5VTB9 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
RNF220Q5VTB9 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
RNF220Q5VTB9 RNU1-15P-201ENST00000353977 144 ntBASIC4.33□□□□□ -1.72
RNF220Q5VTB9 RNA5SP123-201ENST00000363244 119 ntBASIC4.33□□□□□ -1.72
RNF220Q5VTB9 RNU5A-8P-201ENST00000364102 114 ntBASIC4.33□□□□□ -1.72
RNF220Q5VTB9 RN7SKP269-201ENST00000365545 319 ntBASIC4.33□□□□□ -1.72
RNF220Q5VTB9 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
RNF220Q5VTB9 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC4.33□□□□□ -1.72
RNF220Q5VTB9 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
RNF220Q5VTB9 RNU6-259P-201ENST00000383999 107 ntBASIC4.33□□□□□ -1.72
RNF220Q5VTB9 RNU6-432P-201ENST00000384196 109 ntBASIC4.33□□□□□ -1.72
RNF220Q5VTB9 RNU6-278P-201ENST00000390945 109 ntBASIC4.33□□□□□ -1.72
RNF220Q5VTB9 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
RNF220Q5VTB9 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
RNF220Q5VTB9 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC4.33□□□□□ -1.72
RNF220Q5VTB9 JKAMPP1-201ENST00000413804 919 ntBASIC4.33□□□□□ -1.72
RNF220Q5VTB9 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
RNF220Q5VTB9 ISCA1P6-201ENST00000427740 390 ntBASIC4.33□□□□□ -1.72
RNF220Q5VTB9 BRWD1P3-201ENST00000428816 390 ntBASIC4.33□□□□□ -1.72
RNF220Q5VTB9 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC4.33□□□□□ -1.72
RNF220Q5VTB9 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC4.33□□□□□ -1.72
RNF220Q5VTB9 TIMM9P1-201ENST00000436122 256 ntBASIC4.33□□□□□ -1.72
RNF220Q5VTB9 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC4.33□□□□□ -1.72
RNF220Q5VTB9 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC4.33□□□□□ -1.72
RNF220Q5VTB9 RGS5-217ENST00000451759 835 ntTSL 3 BASIC4.33□□□□□ -1.72
RNF220Q5VTB9 AC079168.2-201ENST00000453977 416 ntBASIC4.33□□□□□ -1.72
RNF220Q5VTB9 AC108059.3-201ENST00000456388 214 ntBASIC4.33□□□□□ -1.72
RNF220Q5VTB9 snoU13.24-201ENST00000458998 104 ntBASIC4.33□□□□□ -1.72
RNF220Q5VTB9 AC010285.1-201ENST00000470580 392 ntBASIC4.33□□□□□ -1.72
RNF220Q5VTB9 AP000926.1-201ENST00000479573 241 ntBASIC4.33□□□□□ -1.72
RNF220Q5VTB9 RPS3AP50-201ENST00000487064 803 ntBASIC4.33□□□□□ -1.72
RNF220Q5VTB9 AL358832.1-201ENST00000497800 389 ntBASIC4.33□□□□□ -1.72
RNF220Q5VTB9 HMGB1P22-201ENST00000505315 124 ntBASIC4.33□□□□□ -1.72
RNF220Q5VTB9 PARP4P3-201ENST00000510265 317 ntBASIC4.33□□□□□ -1.72
RNF220Q5VTB9 AC022483.1-201ENST00000514020 567 ntBASIC4.33□□□□□ -1.72
RNF220Q5VTB9 RNU4ATAC6P-201ENST00000516592 126 ntBASIC4.33□□□□□ -1.72
RNF220Q5VTB9 MIR2114-201ENST00000516645 80 ntBASIC4.33□□□□□ -1.72
RNF220Q5VTB9 RNU6-430P-201ENST00000517078 107 ntBASIC4.33□□□□□ -1.72
RNF220Q5VTB9 MTCO2P4-201ENST00000517968 247 ntBASIC4.33□□□□□ -1.72
RNF220Q5VTB9 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC4.33□□□□□ -1.72
RNF220Q5VTB9 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC4.33□□□□□ -1.72
RNF220Q5VTB9 AP000857.1-201ENST00000532151 543 ntBASIC4.33□□□□□ -1.72
RNF220Q5VTB9 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC4.33□□□□□ -1.72
RNF220Q5VTB9 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC4.33□□□□□ -1.72
RNF220Q5VTB9 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC4.33□□□□□ -1.72
RNF220Q5VTB9 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
RNF220Q5VTB9 BGLT3-201ENST00000564523 994 ntBASIC4.33□□□□□ -1.72
RNF220Q5VTB9 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC4.33□□□□□ -1.72
RNF220Q5VTB9 EIF1P4-201ENST00000572664 335 ntBASIC4.33□□□□□ -1.72
RNF220Q5VTB9 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC4.33□□□□□ -1.72
RNF220Q5VTB9 AL391358.1-201ENST00000605342 190 ntBASIC4.33□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 130.5 ms