Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 RPS26P30-201ENST00000443431 335 ntBASIC1.51□□□□□ -2.17
VPS13DQ5THJ4 AL445669.2-201ENST00000454425 421 ntBASIC1.51□□□□□ -2.17
VPS13DQ5THJ4 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC1.51□□□□□ -2.17
VPS13DQ5THJ4 GNAI2P1-201ENST00000541815 315 ntBASIC1.51□□□□□ -2.17
VPS13DQ5THJ4 AL645944.1-201ENST00000603857 493 ntBASIC1.51□□□□□ -2.17
VPS13DQ5THJ4 ADAM3A-203ENST00000461344 2157 ntBASIC1.51□□□□□ -2.17
VPS13DQ5THJ4 DYNLT3P1-201ENST00000378574 347 ntBASIC1.51□□□□□ -2.17
VPS13DQ5THJ4 MIR9-3-201ENST00000385084 90 ntBASIC1.51□□□□□ -2.17
VPS13DQ5THJ4 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC1.51□□□□□ -2.17
VPS13DQ5THJ4 AC074029.1-201ENST00000552531 1044 ntBASIC1.51□□□□□ -2.17
VPS13DQ5THJ4 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC1.51□□□□□ -2.17
VPS13DQ5THJ4 AC104237.2-201ENST00000612456 443 ntBASIC1.51□□□□□ -2.17
VPS13DQ5THJ4 5S_rRNA.12-201ENST00000617631 107 ntBASIC1.51□□□□□ -2.17
VPS13DQ5THJ4 Y_RNA.338-201ENST00000365320 114 ntBASIC1.5□□□□□ -2.17
VPS13DQ5THJ4 AC010745.4-201ENST00000420130 740 ntTSL 5 BASIC1.5□□□□□ -2.17
VPS13DQ5THJ4 MTCYBP31-201ENST00000438855 1122 ntBASIC1.5□□□□□ -2.17
VPS13DQ5THJ4 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC1.5□□□□□ -2.17
VPS13DQ5THJ4 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC1.5□□□□□ -2.17
VPS13DQ5THJ4 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC1.5□□□□□ -2.17
VPS13DQ5THJ4 FRG1DP-201ENST00000635586 771 ntBASIC1.5□□□□□ -2.17
VPS13DQ5THJ4 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.5□□□□□ -2.17
VPS13DQ5THJ4 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC1.5□□□□□ -2.17
VPS13DQ5THJ4 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC1.5□□□□□ -2.17
VPS13DQ5THJ4 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
VPS13DQ5THJ4 AL354719.1-201ENST00000406535 843 ntBASIC1.5□□□□□ -2.17
VPS13DQ5THJ4 MTCO2P17-201ENST00000424336 677 ntBASIC1.5□□□□□ -2.17
VPS13DQ5THJ4 TRMT112P2-201ENST00000512910 132 ntBASIC1.5□□□□□ -2.17
VPS13DQ5THJ4 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC1.5□□□□□ -2.17
VPS13DQ5THJ4 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC1.5□□□□□ -2.17
VPS13DQ5THJ4 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC1.5□□□□□ -2.17
VPS13DQ5THJ4 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC1.5□□□□□ -2.17
VPS13DQ5THJ4 PHKBP1-201ENST00000450951 1951 ntBASIC1.5□□□□□ -2.17
VPS13DQ5THJ4 IL6ST-204ENST00000381293 612 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
VPS13DQ5THJ4 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC1.5□□□□□ -2.17
VPS13DQ5THJ4 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC1.5□□□□□ -2.17
VPS13DQ5THJ4 AC105137.2-201ENST00000569073 466 ntBASIC1.5□□□□□ -2.17
VPS13DQ5THJ4 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
VPS13DQ5THJ4 ZNF355P-201ENST00000427301 3216 ntBASIC1.5□□□□□ -2.17
VPS13DQ5THJ4 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC1.5□□□□□ -2.17
VPS13DQ5THJ4 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
VPS13DQ5THJ4 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC1.5□□□□□ -2.17
VPS13DQ5THJ4 MIR5007-201ENST00000583098 95 ntBASIC1.5□□□□□ -2.17
VPS13DQ5THJ4 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC1.5□□□□□ -2.17
VPS13DQ5THJ4 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC1.5□□□□□ -2.17
VPS13DQ5THJ4 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC1.5□□□□□ -2.17
VPS13DQ5THJ4 AL670379.6-201ENST00000603753 252 ntBASIC1.5□□□□□ -2.17
VPS13DQ5THJ4 AL670379.11-201ENST00000604059 253 ntBASIC1.5□□□□□ -2.17
VPS13DQ5THJ4 AL670379.10-201ENST00000604330 253 ntBASIC1.5□□□□□ -2.17
VPS13DQ5THJ4 AC008162.1-201ENST00000604718 254 ntBASIC1.5□□□□□ -2.17
VPS13DQ5THJ4 AL670379.1-201ENST00000604752 252 ntBASIC1.5□□□□□ -2.17
VPS13DQ5THJ4 AL670379.2-201ENST00000604983 252 ntBASIC1.5□□□□□ -2.17
VPS13DQ5THJ4 AL670379.5-201ENST00000605253 252 ntBASIC1.5□□□□□ -2.17
VPS13DQ5THJ4 AL670379.4-201ENST00000605279 254 ntBASIC1.5□□□□□ -2.17
VPS13DQ5THJ4 AL670379.12-201ENST00000605291 253 ntBASIC1.5□□□□□ -2.17
VPS13DQ5THJ4 AL670379.8-201ENST00000605353 252 ntBASIC1.5□□□□□ -2.17
VPS13DQ5THJ4 AL670379.9-201ENST00000605428 253 ntBASIC1.5□□□□□ -2.17
VPS13DQ5THJ4 AL670379.7-201ENST00000605823 252 ntBASIC1.5□□□□□ -2.17
VPS13DQ5THJ4 AP004247.3-201ENST00000608682 624 ntBASIC1.5□□□□□ -2.17
VPS13DQ5THJ4 CU459211.1-201ENST00000635667 749 ntBASIC1.5□□□□□ -2.17
VPS13DQ5THJ4 MIR7153-201ENST00000637758 57 ntBASIC1.5□□□□□ -2.17
VPS13DQ5THJ4 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
VPS13DQ5THJ4 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC1.49□□□□□ -2.17
VPS13DQ5THJ4 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
VPS13DQ5THJ4 RNU6-1140P-201ENST00000410517 106 ntBASIC1.49□□□□□ -2.17
VPS13DQ5THJ4 NDUFB4P5-201ENST00000415445 361 ntBASIC1.49□□□□□ -2.17
VPS13DQ5THJ4 AL356806.1-201ENST00000422524 916 ntBASIC1.49□□□□□ -2.17
VPS13DQ5THJ4 RN7SL297P-201ENST00000483161 293 ntBASIC1.49□□□□□ -2.17
VPS13DQ5THJ4 RPL23AP70-201ENST00000483361 460 ntBASIC1.49□□□□□ -2.17
VPS13DQ5THJ4 RNU6-1053P-201ENST00000515930 101 ntBASIC1.49□□□□□ -2.17
VPS13DQ5THJ4 AL389895.1-201ENST00000554127 252 ntBASIC1.49□□□□□ -2.17
VPS13DQ5THJ4 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC1.49□□□□□ -2.17
VPS13DQ5THJ4 AC002076.2-201ENST00000617362 122 ntBASIC1.49□□□□□ -2.17
VPS13DQ5THJ4 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
VPS13DQ5THJ4 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
VPS13DQ5THJ4 AC117529.2-201ENST00000512159 2068 ntBASIC1.49□□□□□ -2.17
VPS13DQ5THJ4 RPS7P9-201ENST00000414704 586 ntBASIC1.49□□□□□ -2.17
VPS13DQ5THJ4 CEACAMP4-201ENST00000457676 421 ntBASIC1.49□□□□□ -2.17
VPS13DQ5THJ4 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC1.49□□□□□ -2.17
VPS13DQ5THJ4 CBX3P5-201ENST00000552017 521 ntBASIC1.49□□□□□ -2.17
VPS13DQ5THJ4 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
VPS13DQ5THJ4 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC1.49□□□□□ -2.17
VPS13DQ5THJ4 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
VPS13DQ5THJ4 AC107081.1-201ENST00000414975 361 ntBASIC1.49□□□□□ -2.17
VPS13DQ5THJ4 AL450326.2-201ENST00000421913 1962 ntBASIC1.49□□□□□ -2.17
VPS13DQ5THJ4 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC1.49□□□□□ -2.17
VPS13DQ5THJ4 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC1.49□□□□□ -2.17
VPS13DQ5THJ4 RN7SKP219-201ENST00000516825 296 ntBASIC1.49□□□□□ -2.17
VPS13DQ5THJ4 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC1.48□□□□□ -2.17
VPS13DQ5THJ4 PWAR6-201ENST00000552334 4618 ntBASIC1.48□□□□□ -2.17
VPS13DQ5THJ4 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC1.48□□□□□ -2.17
VPS13DQ5THJ4 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC1.48□□□□□ -2.17
VPS13DQ5THJ4 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC1.48□□□□□ -2.17
VPS13DQ5THJ4 AC093151.1-201ENST00000427711 313 ntBASIC1.48□□□□□ -2.17
VPS13DQ5THJ4 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC1.48□□□□□ -2.17
VPS13DQ5THJ4 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC1.48□□□□□ -2.17
VPS13DQ5THJ4 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC1.48□□□□□ -2.17
VPS13DQ5THJ4 AP000787.2-201ENST00000604432 568 ntBASIC1.48□□□□□ -2.17
VPS13DQ5THJ4 AL022099.1-201ENST00000604551 712 ntBASIC1.48□□□□□ -2.17
VPS13DQ5THJ4 AL359094.1-202ENST00000629917 1113 ntTSL 5 BASIC1.48□□□□□ -2.17
VPS13DQ5THJ4 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC1.48□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 96.4 ms