Protein–RNA interactions for Protein: Q53GD3

SLC44A4, Choline transporter-like protein 4, humanhuman

Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A4Q53GD3 AL022238.1-201ENST00000442557 355 ntBASIC4.58□□□□□ -1.68
SLC44A4Q53GD3 AP000542.1-201ENST00000448473 371 ntBASIC4.58□□□□□ -1.68
SLC44A4Q53GD3 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC4.58□□□□□ -1.68
SLC44A4Q53GD3 RN7SL132P-201ENST00000478131 296 ntBASIC4.58□□□□□ -1.68
SLC44A4Q53GD3 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC4.58□□□□□ -1.68
SLC44A4Q53GD3 AC025445.1-201ENST00000502728 300 ntBASIC4.58□□□□□ -1.68
SLC44A4Q53GD3 ARL2BPP4-201ENST00000506854 471 ntBASIC4.58□□□□□ -1.68
SLC44A4Q53GD3 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC4.58□□□□□ -1.68
SLC44A4Q53GD3 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC4.58□□□□□ -1.68
SLC44A4Q53GD3 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
SLC44A4Q53GD3 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC4.58□□□□□ -1.68
SLC44A4Q53GD3 MTND4LP18-201ENST00000526864 291 ntBASIC4.58□□□□□ -1.68
SLC44A4Q53GD3 MAL2-203ENST00000534619 578 ntTSL 4 BASIC4.58□□□□□ -1.68
SLC44A4Q53GD3 TRAV8-5-201ENST00000537369 341 ntBASIC4.58□□□□□ -1.68
SLC44A4Q53GD3 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC4.58□□□□□ -1.68
SLC44A4Q53GD3 ZNF519P3-201ENST00000557158 1032 ntBASIC4.58□□□□□ -1.68
SLC44A4Q53GD3 MTND6P33-201ENST00000571794 183 ntBASIC4.58□□□□□ -1.68
SLC44A4Q53GD3 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC4.58□□□□□ -1.68
SLC44A4Q53GD3 ACTR3BP1-201ENST00000605584 1247 ntBASIC4.58□□□□□ -1.68
SLC44A4Q53GD3 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC4.58□□□□□ -1.68
SLC44A4Q53GD3 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC4.58□□□□□ -1.68
SLC44A4Q53GD3 MIR8059-201ENST00000620427 81 ntBASIC4.58□□□□□ -1.68
SLC44A4Q53GD3 AC095031.1-201ENST00000623685 672 ntBASIC4.58□□□□□ -1.68
SLC44A4Q53GD3 BMS1P21-201ENST00000634565 365 ntBASIC4.58□□□□□ -1.68
SLC44A4Q53GD3 AC099654.12-201ENST00000639868 649 ntBASIC4.58□□□□□ -1.68
SLC44A4Q53GD3 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
SLC44A4Q53GD3 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
SLC44A4Q53GD3 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
SLC44A4Q53GD3 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC4.58□□□□□ -1.68
SLC44A4Q53GD3 AL359893.1-201ENST00000447628 1580 ntBASIC4.57□□□□□ -1.68
SLC44A4Q53GD3 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
SLC44A4Q53GD3 TEX21P-201ENST00000447107 1476 ntBASIC4.57□□□□□ -1.68
SLC44A4Q53GD3 THUMPD3P1-201ENST00000506556 1480 ntBASIC4.57□□□□□ -1.68
SLC44A4Q53GD3 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC4.57□□□□□ -1.68
SLC44A4Q53GD3 LARP1BP1-201ENST00000506036 1359 ntBASIC4.57□□□□□ -1.68
SLC44A4Q53GD3 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC4.57□□□□□ -1.68
SLC44A4Q53GD3 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
SLC44A4Q53GD3 RNU1-83P-201ENST00000363426 164 ntBASIC4.57□□□□□ -1.68
SLC44A4Q53GD3 RNU6-730P-201ENST00000383954 104 ntBASIC4.57□□□□□ -1.68
SLC44A4Q53GD3 MIR670-201ENST00000390142 98 ntBASIC4.57□□□□□ -1.68
SLC44A4Q53GD3 HSPD1P16-201ENST00000402302 394 ntBASIC4.57□□□□□ -1.68
SLC44A4Q53GD3 AL080315.1-201ENST00000406055 466 ntBASIC4.57□□□□□ -1.68
SLC44A4Q53GD3 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC4.57□□□□□ -1.68
SLC44A4Q53GD3 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC4.57□□□□□ -1.68
SLC44A4Q53GD3 AL590233.1-201ENST00000430017 456 ntBASIC4.57□□□□□ -1.68
SLC44A4Q53GD3 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC4.57□□□□□ -1.68
SLC44A4Q53GD3 AC093392.2-201ENST00000450682 337 ntBASIC4.57□□□□□ -1.68
SLC44A4Q53GD3 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC4.57□□□□□ -1.68
SLC44A4Q53GD3 SSXP1-201ENST00000453640 473 ntBASIC4.57□□□□□ -1.68
SLC44A4Q53GD3 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC4.57□□□□□ -1.68
SLC44A4Q53GD3 AL132838.2-201ENST00000492041 314 ntBASIC4.57□□□□□ -1.68
SLC44A4Q53GD3 ATP6V1G1P6-201ENST00000504007 334 ntBASIC4.57□□□□□ -1.68
SLC44A4Q53GD3 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC4.57□□□□□ -1.68
SLC44A4Q53GD3 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
SLC44A4Q53GD3 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC4.57□□□□□ -1.68
SLC44A4Q53GD3 RN7SKP234-201ENST00000517173 224 ntBASIC4.57□□□□□ -1.68
SLC44A4Q53GD3 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC4.57□□□□□ -1.68
SLC44A4Q53GD3 CBX3P7-201ENST00000532876 502 ntBASIC4.57□□□□□ -1.68
SLC44A4Q53GD3 AHI1-217ENST00000534469 680 ntTSL 3 BASIC4.57□□□□□ -1.68
SLC44A4Q53GD3 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC4.57□□□□□ -1.68
SLC44A4Q53GD3 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC4.57□□□□□ -1.68
SLC44A4Q53GD3 AP005205.1-201ENST00000563503 508 ntBASIC4.57□□□□□ -1.68
SLC44A4Q53GD3 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC4.57□□□□□ -1.68
SLC44A4Q53GD3 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC4.57□□□□□ -1.68
SLC44A4Q53GD3 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC4.57□□□□□ -1.68
SLC44A4Q53GD3 AC112187.2-201ENST00000604345 283 ntBASIC4.57□□□□□ -1.68
SLC44A4Q53GD3 AL009028.1-201ENST00000604895 802 ntBASIC4.57□□□□□ -1.68
SLC44A4Q53GD3 AC104010.1-201ENST00000616889 150 ntBASIC4.57□□□□□ -1.68
SLC44A4Q53GD3 AL008636.1-201ENST00000625038 1018 ntBASIC4.57□□□□□ -1.68
SLC44A4Q53GD3 CRYM-AS1-204ENST00000637983 556 ntBASIC4.57□□□□□ -1.68
SLC44A4Q53GD3 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC4.57□□□□□ -1.68
SLC44A4Q53GD3 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.57□□□□□ -1.68
SLC44A4Q53GD3 CPHL1P-201ENST00000461341 3407 ntBASIC4.57□□□□□ -1.68
SLC44A4Q53GD3 SAGE4P-201ENST00000442271 3381 ntBASIC4.57□□□□□ -1.68
SLC44A4Q53GD3 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC4.57□□□□□ -1.68
SLC44A4Q53GD3 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
SLC44A4Q53GD3 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
SLC44A4Q53GD3 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
SLC44A4Q53GD3 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
SLC44A4Q53GD3 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC4.56□□□□□ -1.68
SLC44A4Q53GD3 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
SLC44A4Q53GD3 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
SLC44A4Q53GD3 RNA5SP52-201ENST00000362448 134 ntBASIC4.56□□□□□ -1.68
SLC44A4Q53GD3 RNVU1-3-201ENST00000364313 161 ntBASIC4.56□□□□□ -1.68
SLC44A4Q53GD3 SNORA62.3-201ENST00000365110 153 ntBASIC4.56□□□□□ -1.68
SLC44A4Q53GD3 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
SLC44A4Q53GD3 MIR554-201ENST00000384874 96 ntBASIC4.56□□□□□ -1.68
SLC44A4Q53GD3 MIR93-201ENST00000385024 80 ntBASIC4.56□□□□□ -1.68
SLC44A4Q53GD3 RPL31P2-201ENST00000413849 377 ntBASIC4.56□□□□□ -1.68
SLC44A4Q53GD3 AC127526.1-201ENST00000417526 366 ntBASIC4.56□□□□□ -1.68
SLC44A4Q53GD3 PSMA2P3-201ENST00000429685 675 ntBASIC4.56□□□□□ -1.68
SLC44A4Q53GD3 AL117339.2-201ENST00000430475 180 ntBASIC4.56□□□□□ -1.68
SLC44A4Q53GD3 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC4.56□□□□□ -1.68
SLC44A4Q53GD3 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC4.56□□□□□ -1.68
SLC44A4Q53GD3 AL353748.1-201ENST00000440753 474 ntBASIC4.56□□□□□ -1.68
SLC44A4Q53GD3 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC4.56□□□□□ -1.68
SLC44A4Q53GD3 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC4.56□□□□□ -1.68
SLC44A4Q53GD3 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC4.56□□□□□ -1.68
SLC44A4Q53GD3 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC4.56□□□□□ -1.68
SLC44A4Q53GD3 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC4.56□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 172.6 ms