Protein–RNA interactions for Protein: Q33E94

RFX4, Transcription factor RFX4, humanhuman

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4Q33E94 ELOCP13-201ENST00000443934 329 ntBASIC2.93□□□□□ -1.94
RFX4Q33E94 AC104073.1-201ENST00000451988 151 ntBASIC2.93□□□□□ -1.94
RFX4Q33E94 MRPL42P4-201ENST00000453267 443 ntBASIC2.93□□□□□ -1.94
RFX4Q33E94 AL136126.1-201ENST00000473603 402 ntBASIC2.93□□□□□ -1.94
RFX4Q33E94 AL024509.2-201ENST00000493462 493 ntBASIC2.93□□□□□ -1.94
RFX4Q33E94 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
RFX4Q33E94 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
RFX4Q33E94 AC008427.1-201ENST00000503102 655 ntBASIC2.93□□□□□ -1.94
RFX4Q33E94 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC2.93□□□□□ -1.94
RFX4Q33E94 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
RFX4Q33E94 MTCYBP37-201ENST00000510642 1133 ntBASIC2.93□□□□□ -1.94
RFX4Q33E94 AC008837.1-201ENST00000511513 412 ntBASIC2.93□□□□□ -1.94
RFX4Q33E94 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
RFX4Q33E94 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
RFX4Q33E94 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC2.93□□□□□ -1.94
RFX4Q33E94 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC2.93□□□□□ -1.94
RFX4Q33E94 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC2.93□□□□□ -1.94
RFX4Q33E94 AC044913.1-201ENST00000557200 430 ntBASIC2.93□□□□□ -1.94
RFX4Q33E94 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC2.93□□□□□ -1.94
RFX4Q33E94 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC2.93□□□□□ -1.94
RFX4Q33E94 CXXC1P1-203ENST00000589302 746 ntTSL 3 BASIC2.93□□□□□ -1.94
RFX4Q33E94 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC2.93□□□□□ -1.94
RFX4Q33E94 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC2.93□□□□□ -1.94
RFX4Q33E94 AL133393.1-201ENST00000603277 287 ntBASIC2.93□□□□□ -1.94
RFX4Q33E94 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC2.93□□□□□ -1.94
RFX4Q33E94 AL590282.1-201ENST00000610379 1136 ntBASIC2.93□□□□□ -1.94
RFX4Q33E94 U73479.1-201ENST00000618062 168 ntBASIC2.93□□□□□ -1.94
RFX4Q33E94 AC084035.1-201ENST00000634543 607 ntBASIC2.93□□□□□ -1.94
RFX4Q33E94 AC012442.3-202ENST00000636742 206 ntBASIC2.93□□□□□ -1.94
RFX4Q33E94 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC2.93□□□□□ -1.94
RFX4Q33E94 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC2.93□□□□□ -1.94
RFX4Q33E94 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC2.93□□□□□ -1.94
RFX4Q33E94 AC093010.3-201ENST00000570269 15214 ntBASIC2.93□□□□□ -1.94
RFX4Q33E94 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC2.92□□□□□ -1.94
RFX4Q33E94 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC2.92□□□□□ -1.94
RFX4Q33E94 API5P2-201ENST00000397055 1498 ntBASIC2.92□□□□□ -1.94
RFX4Q33E94 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
RFX4Q33E94 RNU6-236P-201ENST00000363886 106 ntBASIC2.92□□□□□ -1.94
RFX4Q33E94 RNU6-374P-201ENST00000364146 108 ntBASIC2.92□□□□□ -1.94
RFX4Q33E94 MIR649-201ENST00000384843 97 ntBASIC2.92□□□□□ -1.94
RFX4Q33E94 RNU6-298P-201ENST00000390888 96 ntBASIC2.92□□□□□ -1.94
RFX4Q33E94 RNU6-1000P-201ENST00000391066 106 ntBASIC2.92□□□□□ -1.94
RFX4Q33E94 RPL5P18-201ENST00000406671 891 ntBASIC2.92□□□□□ -1.94
RFX4Q33E94 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC2.92□□□□□ -1.94
RFX4Q33E94 AL136133.1-201ENST00000413694 376 ntBASIC2.92□□□□□ -1.94
RFX4Q33E94 RPS29P4-201ENST00000414733 161 ntBASIC2.92□□□□□ -1.94
RFX4Q33E94 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC2.92□□□□□ -1.94
RFX4Q33E94 OFD1P2Y-201ENST00000421895 1149 ntBASIC2.92□□□□□ -1.94
RFX4Q33E94 PTP4A1P7-201ENST00000423476 514 ntBASIC2.92□□□□□ -1.94
RFX4Q33E94 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC2.92□□□□□ -1.94
RFX4Q33E94 Z93242.1-201ENST00000427102 353 ntBASIC2.92□□□□□ -1.94
RFX4Q33E94 ATP6V0E1P4-201ENST00000427294 242 ntBASIC2.92□□□□□ -1.94
RFX4Q33E94 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC2.92□□□□□ -1.94
RFX4Q33E94 AC122718.1-201ENST00000439448 744 ntBASIC2.92□□□□□ -1.94
RFX4Q33E94 PTGES3P1-201ENST00000439531 483 ntBASIC2.92□□□□□ -1.94
RFX4Q33E94 ZNF736P1Y-201ENST00000440402 1276 ntBASIC2.92□□□□□ -1.94
RFX4Q33E94 RPL26P28-201ENST00000451325 435 ntBASIC2.92□□□□□ -1.94
RFX4Q33E94 ELOCP23-201ENST00000452014 332 ntBASIC2.92□□□□□ -1.94
RFX4Q33E94 MTND2P39-201ENST00000457230 764 ntBASIC2.92□□□□□ -1.94
RFX4Q33E94 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC2.92□□□□□ -1.94
RFX4Q33E94 SYPL1P1-201ENST00000473622 768 ntBASIC2.92□□□□□ -1.94
RFX4Q33E94 AC020898.1-201ENST00000474167 787 ntBASIC2.92□□□□□ -1.94
RFX4Q33E94 HMGN2P13-201ENST00000476476 274 ntBASIC2.92□□□□□ -1.94
RFX4Q33E94 AP004217.1-201ENST00000480579 346 ntBASIC2.92□□□□□ -1.94
RFX4Q33E94 RPL21P13-201ENST00000488305 481 ntBASIC2.92□□□□□ -1.94
RFX4Q33E94 ENSA-210ENST00000503241 574 ntTSL 3 BASIC2.92□□□□□ -1.94
RFX4Q33E94 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC2.92□□□□□ -1.94
RFX4Q33E94 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
RFX4Q33E94 AC104417.1-201ENST00000523974 751 ntBASIC2.92□□□□□ -1.94
RFX4Q33E94 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC2.92□□□□□ -1.94
RFX4Q33E94 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC2.92□□□□□ -1.94
RFX4Q33E94 AC092470.1-201ENST00000546187 132 ntBASIC2.92□□□□□ -1.94
RFX4Q33E94 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC2.92□□□□□ -1.94
RFX4Q33E94 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC2.92□□□□□ -1.94
RFX4Q33E94 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC2.92□□□□□ -1.94
RFX4Q33E94 AC074051.3-201ENST00000570238 358 ntBASIC2.92□□□□□ -1.94
RFX4Q33E94 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC2.92□□□□□ -1.94
RFX4Q33E94 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC2.92□□□□□ -1.94
RFX4Q33E94 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC2.92□□□□□ -1.94
RFX4Q33E94 AC012119.1-201ENST00000603184 222 ntBASIC2.92□□□□□ -1.94
RFX4Q33E94 AL583856.2-201ENST00000606298 543 ntBASIC2.92□□□□□ -1.94
RFX4Q33E94 AC018645.2-201ENST00000609151 472 ntBASIC2.92□□□□□ -1.94
RFX4Q33E94 AC093673.2-201ENST00000609674 331 ntBASIC2.92□□□□□ -1.94
RFX4Q33E94 AL109620.1-201ENST00000618738 1197 ntBASIC2.92□□□□□ -1.94
RFX4Q33E94 AL049777.1-201ENST00000622740 518 ntBASIC2.92□□□□□ -1.94
RFX4Q33E94 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC2.92□□□□□ -1.94
RFX4Q33E94 AL392088.2-201ENST00000637607 285 ntBASIC2.92□□□□□ -1.94
RFX4Q33E94 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
RFX4Q33E94 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC2.91□□□□□ -1.94
RFX4Q33E94 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
RFX4Q33E94 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
RFX4Q33E94 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC2.91□□□□□ -1.94
RFX4Q33E94 MAPK6PS3-201ENST00000403865 2162 ntBASIC2.91□□□□□ -1.94
RFX4Q33E94 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC2.91□□□□□ -1.94
RFX4Q33E94 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
RFX4Q33E94 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.91□□□□□ -1.94
RFX4Q33E94 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
RFX4Q33E94 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC2.91□□□□□ -1.94
RFX4Q33E94 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
RFX4Q33E94 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 86.2 ms