Protein–RNA interactions for Protein: Q16656

NRF1, Nuclear respiratory factor 1, humanhuman

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NRF1Q16656 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
NRF1Q16656 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.04□□□□□ -1.92
NRF1Q16656 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
NRF1Q16656 AF117829.1-206ENST00000621883 3802 ntBASIC3.04□□□□□ -1.92
NRF1Q16656 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.04□□□□□ -1.92
NRF1Q16656 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.04□□□□□ -1.92
NRF1Q16656 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
NRF1Q16656 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC3.03□□□□□ -1.92
NRF1Q16656 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC3.03□□□□□ -1.92
NRF1Q16656 AL645568.2-201ENST00000432815 1337 ntBASIC3.03□□□□□ -1.92
NRF1Q16656 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
NRF1Q16656 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
NRF1Q16656 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC3.03□□□□□ -1.92
NRF1Q16656 RNU6-629P-201ENST00000384061 103 ntBASIC3.03□□□□□ -1.92
NRF1Q16656 SNORD116-23-201ENST00000384645 92 ntBASIC3.03□□□□□ -1.92
NRF1Q16656 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
NRF1Q16656 AL139098.1-201ENST00000407291 389 ntBASIC3.03□□□□□ -1.92
NRF1Q16656 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC3.03□□□□□ -1.92
NRF1Q16656 RN7SKP123-201ENST00000410732 291 ntBASIC3.03□□□□□ -1.92
NRF1Q16656 RNU4-78P-201ENST00000410940 126 ntBASIC3.03□□□□□ -1.92
NRF1Q16656 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.03□□□□□ -1.92
NRF1Q16656 MTCYBP24-201ENST00000420387 1106 ntBASIC3.03□□□□□ -1.92
NRF1Q16656 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC3.03□□□□□ -1.92
NRF1Q16656 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC3.03□□□□□ -1.92
NRF1Q16656 GAPDHP27-201ENST00000447427 1020 ntBASIC3.03□□□□□ -1.92
NRF1Q16656 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC3.03□□□□□ -1.92
NRF1Q16656 MTATP6P14-201ENST00000455189 673 ntBASIC3.03□□□□□ -1.92
NRF1Q16656 GAPDHP39-201ENST00000481866 979 ntBASIC3.03□□□□□ -1.92
NRF1Q16656 RPL21P13-201ENST00000488305 481 ntBASIC3.03□□□□□ -1.92
NRF1Q16656 APOOP4-201ENST00000513530 597 ntBASIC3.03□□□□□ -1.92
NRF1Q16656 RNU6-885P-201ENST00000516607 104 ntBASIC3.03□□□□□ -1.92
NRF1Q16656 AC023632.1-201ENST00000518463 375 ntBASIC3.03□□□□□ -1.92
NRF1Q16656 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC3.03□□□□□ -1.92
NRF1Q16656 AP000790.1-201ENST00000528891 737 ntBASIC3.03□□□□□ -1.92
NRF1Q16656 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC3.03□□□□□ -1.92
NRF1Q16656 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC3.03□□□□□ -1.92
NRF1Q16656 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC3.03□□□□□ -1.92
NRF1Q16656 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC3.03□□□□□ -1.92
NRF1Q16656 AC044913.1-201ENST00000557200 430 ntBASIC3.03□□□□□ -1.92
NRF1Q16656 AC107954.1-201ENST00000565906 727 ntBASIC3.03□□□□□ -1.92
NRF1Q16656 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC3.03□□□□□ -1.92
NRF1Q16656 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC3.03□□□□□ -1.92
NRF1Q16656 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC3.03□□□□□ -1.92
NRF1Q16656 AC093673.2-201ENST00000609674 331 ntBASIC3.03□□□□□ -1.92
NRF1Q16656 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC3.03□□□□□ -1.92
NRF1Q16656 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
NRF1Q16656 RNU6-1192P-201ENST00000612197 107 ntBASIC3.03□□□□□ -1.92
NRF1Q16656 MIR8058-201ENST00000615737 89 ntBASIC3.03□□□□□ -1.92
NRF1Q16656 RNU6-489P-201ENST00000618289 107 ntBASIC3.03□□□□□ -1.92
NRF1Q16656 AC009269.6-201ENST00000621778 588 ntBASIC3.03□□□□□ -1.92
NRF1Q16656 AC098679.5-201ENST00000624394 571 ntBASIC3.03□□□□□ -1.92
NRF1Q16656 AC099654.8-201ENST00000637757 681 ntBASIC3.03□□□□□ -1.92
NRF1Q16656 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.03□□□□□ -1.92
NRF1Q16656 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.93
NRF1Q16656 AC117529.2-201ENST00000512159 2068 ntBASIC3.02□□□□□ -1.93
NRF1Q16656 MAPK10-362ENST00000641864 4484 ntBASIC3.02□□□□□ -1.93
NRF1Q16656 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC3.02□□□□□ -1.93
NRF1Q16656 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
NRF1Q16656 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.02□□□□□ -1.93
NRF1Q16656 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
NRF1Q16656 RNU6-582P-201ENST00000362989 107 ntBASIC3.02□□□□□ -1.93
NRF1Q16656 SNORA38.1-201ENST00000364172 131 ntBASIC3.02□□□□□ -1.93
NRF1Q16656 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC3.02□□□□□ -1.93
NRF1Q16656 RNU6-921P-201ENST00000384361 107 ntBASIC3.02□□□□□ -1.93
NRF1Q16656 SSXP10-201ENST00000402595 565 ntBASIC3.02□□□□□ -1.93
NRF1Q16656 TANK-206ENST00000406287 875 ntTSL 5 BASIC3.02□□□□□ -1.93
NRF1Q16656 OR1AA1P-201ENST00000419597 916 ntBASIC3.02□□□□□ -1.93
NRF1Q16656 RPF2P1-201ENST00000424137 906 ntBASIC3.02□□□□□ -1.93
NRF1Q16656 AC011242.1-201ENST00000433596 1158 ntBASIC3.02□□□□□ -1.93
NRF1Q16656 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC3.02□□□□□ -1.93
NRF1Q16656 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC3.02□□□□□ -1.93
NRF1Q16656 COX6CP18-201ENST00000448769 222 ntBASIC3.02□□□□□ -1.93
NRF1Q16656 MRPL42P4-201ENST00000453267 443 ntBASIC3.02□□□□□ -1.93
NRF1Q16656 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC3.02□□□□□ -1.93
NRF1Q16656 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
NRF1Q16656 AL136126.1-201ENST00000473603 402 ntBASIC3.02□□□□□ -1.93
NRF1Q16656 AC108860.1-201ENST00000484521 383 ntBASIC3.02□□□□□ -1.93
NRF1Q16656 HSPD1P15-201ENST00000505573 1122 ntBASIC3.02□□□□□ -1.93
NRF1Q16656 MTCO3P44-201ENST00000510977 541 ntBASIC3.02□□□□□ -1.93
NRF1Q16656 AC093752.1-206ENST00000511823 336 ntBASIC3.02□□□□□ -1.93
NRF1Q16656 SNORA19.3-201ENST00000516165 130 ntBASIC3.02□□□□□ -1.93
NRF1Q16656 RNA5SP135-201ENST00000517019 125 ntBASIC3.02□□□□□ -1.93
NRF1Q16656 RNU6-1028P-201ENST00000517164 93 ntBASIC3.02□□□□□ -1.93
NRF1Q16656 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC3.02□□□□□ -1.93
NRF1Q16656 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
NRF1Q16656 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC3.02□□□□□ -1.93
NRF1Q16656 NDUFS5P6-201ENST00000529136 295 ntBASIC3.02□□□□□ -1.93
NRF1Q16656 AC118942.1-201ENST00000529674 1035 ntBASIC3.02□□□□□ -1.93
NRF1Q16656 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.02□□□□□ -1.93
NRF1Q16656 OR8K4P-201ENST00000534608 872 ntBASIC3.02□□□□□ -1.93
NRF1Q16656 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC3.02□□□□□ -1.93
NRF1Q16656 AC092470.1-201ENST00000546187 132 ntBASIC3.02□□□□□ -1.93
NRF1Q16656 GTF2IP8-201ENST00000560687 584 ntBASIC3.02□□□□□ -1.93
NRF1Q16656 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC3.02□□□□□ -1.93
NRF1Q16656 AC090616.5-202ENST00000582111 297 ntBASIC3.02□□□□□ -1.93
NRF1Q16656 CXXC1P1-203ENST00000589302 746 ntTSL 3 BASIC3.02□□□□□ -1.93
NRF1Q16656 AP001542.2-201ENST00000593141 364 ntBASIC3.02□□□□□ -1.93
NRF1Q16656 BNIP3P27-201ENST00000599991 412 ntBASIC3.02□□□□□ -1.93
NRF1Q16656 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC3.02□□□□□ -1.93
NRF1Q16656 AL583856.2-201ENST00000606298 543 ntBASIC3.02□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 90.4 ms