Protein–RNA interactions for Protein: Q15853

USF2, Upstream stimulatory factor 2, humanhuman

Predicted RBP Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USF2Q15853 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC2.68□□□□□ -1.98
USF2Q15853 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC2.68□□□□□ -1.98
USF2Q15853 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC2.68□□□□□ -1.98
USF2Q15853 ISCA1P2-201ENST00000438679 421 ntBASIC2.68□□□□□ -1.98
USF2Q15853 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC2.68□□□□□ -1.98
USF2Q15853 AC007000.2-201ENST00000442564 487 ntBASIC2.68□□□□□ -1.98
USF2Q15853 RPL39P40-201ENST00000445481 146 ntBASIC2.68□□□□□ -1.98
USF2Q15853 AC005358.1-201ENST00000445508 1143 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
USF2Q15853 AC044797.1-201ENST00000445744 679 ntBASIC2.68□□□□□ -1.98
USF2Q15853 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC2.68□□□□□ -1.98
USF2Q15853 AC021205.2-201ENST00000480069 347 ntBASIC2.68□□□□□ -1.98
USF2Q15853 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC2.68□□□□□ -1.98
USF2Q15853 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC2.68□□□□□ -1.98
USF2Q15853 AC118282.1-201ENST00000506408 765 ntBASIC2.68□□□□□ -1.98
USF2Q15853 SLC25A15P5-201ENST00000508033 253 ntBASIC2.68□□□□□ -1.98
USF2Q15853 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC2.68□□□□□ -1.98
USF2Q15853 AC119751.1-201ENST00000513357 765 ntBASIC2.68□□□□□ -1.98
USF2Q15853 PAICSP4-201ENST00000517543 1253 ntBASIC2.68□□□□□ -1.98
USF2Q15853 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC2.68□□□□□ -1.98
USF2Q15853 IGLVIV-66-1-201ENST00000521832 460 ntBASIC2.68□□□□□ -1.98
USF2Q15853 C8orf22-204ENST00000522267 739 ntAPPRIS ALT1 TSL 2 BASIC2.68□□□□□ -1.98
USF2Q15853 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC2.68□□□□□ -1.98
USF2Q15853 OR6C68-201ENST00000548615 939 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
USF2Q15853 AL355922.5-201ENST00000553534 351 ntTSL 3 BASIC2.68□□□□□ -1.98
USF2Q15853 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC2.68□□□□□ -1.98
USF2Q15853 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC2.68□□□□□ -1.98
USF2Q15853 AC074050.1-201ENST00000563247 211 ntBASIC2.68□□□□□ -1.98
USF2Q15853 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC2.68□□□□□ -1.98
USF2Q15853 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC2.68□□□□□ -1.98
USF2Q15853 BNIP3P33-201ENST00000598912 569 ntBASIC2.68□□□□□ -1.98
USF2Q15853 AC012443.1-201ENST00000605605 231 ntBASIC2.68□□□□□ -1.98
USF2Q15853 AP002826.1-201ENST00000608835 315 ntBASIC2.68□□□□□ -1.98
USF2Q15853 AC107871.2-201ENST00000612894 502 ntBASIC2.68□□□□□ -1.98
USF2Q15853 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC2.68□□□□□ -1.98
USF2Q15853 AL162233.1-201ENST00000620014 944 ntBASIC2.68□□□□□ -1.98
USF2Q15853 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC2.68□□□□□ -1.98
USF2Q15853 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC2.68□□□□□ -1.98
USF2Q15853 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC2.68□□□□□ -1.98
USF2Q15853 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
USF2Q15853 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC2.68□□□□□ -1.98
USF2Q15853 AC093831.2-201ENST00000624393 3427 ntBASIC2.67□□□□□ -1.98
USF2Q15853 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC2.67□□□□□ -1.98
USF2Q15853 OR6K3-202ENST00000368146 996 ntBASIC2.67□□□□□ -1.98
USF2Q15853 MIR627-201ENST00000384979 97 ntBASIC2.67□□□□□ -1.98
USF2Q15853 AL356057.1-202ENST00000402263 756 ntBASIC2.67□□□□□ -1.98
USF2Q15853 HIST1H2APS3-201ENST00000403259 134 ntBASIC2.67□□□□□ -1.98
USF2Q15853 AL096701.2-201ENST00000416920 238 ntBASIC2.67□□□□□ -1.98
USF2Q15853 AC006960.1-201ENST00000419980 153 ntBASIC2.67□□□□□ -1.98
USF2Q15853 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC2.67□□□□□ -1.98
USF2Q15853 MTND4LP7-201ENST00000431728 294 ntBASIC2.67□□□□□ -1.98
USF2Q15853 AL035246.1-201ENST00000433554 1255 ntBASIC2.67□□□□□ -1.98
USF2Q15853 ARL4AP4-201ENST00000434170 518 ntBASIC2.67□□□□□ -1.98
USF2Q15853 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC2.67□□□□□ -1.98
USF2Q15853 NOTCH2P1-201ENST00000443481 624 ntBASIC2.67□□□□□ -1.98
USF2Q15853 RPL23AP20-201ENST00000447965 421 ntBASIC2.67□□□□□ -1.98
USF2Q15853 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC2.67□□□□□ -1.98
USF2Q15853 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC2.67□□□□□ -1.98
USF2Q15853 RN7SL75P-201ENST00000461926 281 ntBASIC2.67□□□□□ -1.98
USF2Q15853 RN7SL542P-201ENST00000467147 294 ntBASIC2.67□□□□□ -1.98
USF2Q15853 RPS27AP9-201ENST00000477681 438 ntBASIC2.67□□□□□ -1.98
USF2Q15853 RPL23AP70-201ENST00000483361 460 ntBASIC2.67□□□□□ -1.98
USF2Q15853 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC2.67□□□□□ -1.98
USF2Q15853 OR5H3P-201ENST00000502817 919 ntBASIC2.67□□□□□ -1.98
USF2Q15853 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.67□□□□□ -1.98
USF2Q15853 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC2.67□□□□□ -1.98
USF2Q15853 AL049835.1-201ENST00000555850 514 ntTSL 3 BASIC2.67□□□□□ -1.98
USF2Q15853 AC023824.3-201ENST00000569003 562 ntBASIC2.67□□□□□ -1.98
USF2Q15853 AC011260.1-201ENST00000578420 472 ntBASIC2.67□□□□□ -1.98
USF2Q15853 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC2.67□□□□□ -1.98
USF2Q15853 AC006116.7-201ENST00000590141 756 ntBASIC2.67□□□□□ -1.98
USF2Q15853 AC006116.10-201ENST00000591836 581 ntBASIC2.67□□□□□ -1.98
USF2Q15853 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC2.67□□□□□ -1.98
USF2Q15853 GAS5-AS1-201ENST00000602767 694 ntBASIC2.67□□□□□ -1.98
USF2Q15853 AC010738.1-201ENST00000604970 987 ntBASIC2.67□□□□□ -1.98
USF2Q15853 AC027309.3-201ENST00000623419 351 ntBASIC2.67□□□□□ -1.98
USF2Q15853 AC091925.2-201ENST00000625059 256 ntBASIC2.67□□□□□ -1.98
USF2Q15853 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC2.67□□□□□ -1.98
USF2Q15853 MFSD8-233ENST00000641482 4860 ntBASIC2.67□□□□□ -1.98
USF2Q15853 AC032011.1-201ENST00000611703 1549 ntBASIC2.67□□□□□ -1.98
USF2Q15853 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC2.67□□□□□ -1.98
USF2Q15853 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC2.66□□□□□ -1.98
USF2Q15853 AL645937.1-201ENST00000641739 1652 ntBASIC2.66□□□□□ -1.98
USF2Q15853 AL161912.2-201ENST00000565707 3007 ntBASIC2.66□□□□□ -1.98
USF2Q15853 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC2.66□□□□□ -1.98
USF2Q15853 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
USF2Q15853 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
USF2Q15853 MAPK10-266ENST00000641066 6555 ntBASIC2.66□□□□□ -1.98
USF2Q15853 IL36B-201ENST00000259213 1186 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
USF2Q15853 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
USF2Q15853 ACAP2-IT1-201ENST00000419899 690 ntTSL 3 BASIC2.66□□□□□ -1.98
USF2Q15853 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC2.66□□□□□ -1.98
USF2Q15853 AL050321.1-201ENST00000432363 400 ntBASIC2.66□□□□□ -1.98
USF2Q15853 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC2.66□□□□□ -1.98
USF2Q15853 RPL23AP16-201ENST00000441715 421 ntBASIC2.66□□□□□ -1.98
USF2Q15853 NAP1L1P3-201ENST00000462291 880 ntBASIC2.66□□□□□ -1.98
USF2Q15853 RPPH1-2P-201ENST00000516688 293 ntBASIC2.66□□□□□ -1.98
USF2Q15853 MIR2276-201ENST00000516886 89 ntBASIC2.66□□□□□ -1.98
USF2Q15853 RN7SKP40-201ENST00000517211 242 ntBASIC2.66□□□□□ -1.98
USF2Q15853 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC2.66□□□□□ -1.98
USF2Q15853 GTF2IP22-201ENST00000554443 182 ntBASIC2.66□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 97.3 ms