Protein–RNA interactions for Protein: Q08945

SSRP1, FACT complex subunit SSRP1, humanhuman

Known RBP Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1Q08945 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC5.23□□□□□ -1.57
SSRP1Q08945 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC5.23□□□□□ -1.57
SSRP1Q08945 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC5.23□□□□□ -1.57
SSRP1Q08945 AC009951.1-201ENST00000623674 2614 ntBASIC5.23□□□□□ -1.57
SSRP1Q08945 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
SSRP1Q08945 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC5.23□□□□□ -1.57
SSRP1Q08945 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
SSRP1Q08945 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC5.22□□□□□ -1.57
SSRP1Q08945 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
SSRP1Q08945 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
SSRP1Q08945 OR51H2P-202ENST00000641424 3046 ntBASIC5.22□□□□□ -1.57
SSRP1Q08945 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
SSRP1Q08945 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC5.22□□□□□ -1.57
SSRP1Q08945 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
SSRP1Q08945 OR5J1P-201ENST00000313544 939 ntBASIC5.22□□□□□ -1.57
SSRP1Q08945 AC079741.1-201ENST00000321498 212 ntBASIC5.22□□□□□ -1.57
SSRP1Q08945 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
SSRP1Q08945 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
SSRP1Q08945 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC5.22□□□□□ -1.57
SSRP1Q08945 Y_RNA.493-201ENST00000384422 102 ntBASIC5.22□□□□□ -1.57
SSRP1Q08945 RNU6-780P-201ENST00000391030 104 ntBASIC5.22□□□□□ -1.57
SSRP1Q08945 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC5.22□□□□□ -1.57
SSRP1Q08945 UQCRBP1-201ENST00000421129 336 ntBASIC5.22□□□□□ -1.57
SSRP1Q08945 AC006548.1-201ENST00000427470 102 ntBASIC5.22□□□□□ -1.57
SSRP1Q08945 ELOCP14-201ENST00000428070 331 ntBASIC5.22□□□□□ -1.57
SSRP1Q08945 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC5.22□□□□□ -1.57
SSRP1Q08945 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC5.22□□□□□ -1.57
SSRP1Q08945 ELOCP7-201ENST00000439968 331 ntBASIC5.22□□□□□ -1.57
SSRP1Q08945 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
SSRP1Q08945 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
SSRP1Q08945 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC5.22□□□□□ -1.57
SSRP1Q08945 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC5.22□□□□□ -1.57
SSRP1Q08945 MTCO2P29-201ENST00000465212 189 ntBASIC5.22□□□□□ -1.57
SSRP1Q08945 AC053481.1-201ENST00000467217 306 ntBASIC5.22□□□□□ -1.57
SSRP1Q08945 RN7SL346P-201ENST00000491561 294 ntBASIC5.22□□□□□ -1.57
SSRP1Q08945 AC023194.1-201ENST00000493084 308 ntBASIC5.22□□□□□ -1.57
SSRP1Q08945 FCF1P3-201ENST00000496394 590 ntBASIC5.22□□□□□ -1.57
SSRP1Q08945 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
SSRP1Q08945 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC5.22□□□□□ -1.57
SSRP1Q08945 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC5.22□□□□□ -1.57
SSRP1Q08945 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC5.22□□□□□ -1.57
SSRP1Q08945 AP003385.6-201ENST00000531603 374 ntBASIC5.22□□□□□ -1.57
SSRP1Q08945 AP003034.1-201ENST00000534621 422 ntBASIC5.22□□□□□ -1.57
SSRP1Q08945 AL157687.1-201ENST00000554853 619 ntBASIC5.22□□□□□ -1.57
SSRP1Q08945 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC5.22□□□□□ -1.57
SSRP1Q08945 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC5.22□□□□□ -1.57
SSRP1Q08945 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC5.22□□□□□ -1.57
SSRP1Q08945 MIR3146-201ENST00000580367 79 ntBASIC5.22□□□□□ -1.57
SSRP1Q08945 AC068790.5-201ENST00000602741 355 ntBASIC5.22□□□□□ -1.57
SSRP1Q08945 AL391646.1-201ENST00000603860 190 ntBASIC5.22□□□□□ -1.57
SSRP1Q08945 AC007363.1-201ENST00000604736 620 ntBASIC5.22□□□□□ -1.57
SSRP1Q08945 AC002550.2-201ENST00000621246 394 ntBASIC5.22□□□□□ -1.57
SSRP1Q08945 AP006248.2-201ENST00000623309 592 ntBASIC5.22□□□□□ -1.57
SSRP1Q08945 CR381572.1-201ENST00000625098 102 ntBASIC5.22□□□□□ -1.57
SSRP1Q08945 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
SSRP1Q08945 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
SSRP1Q08945 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC5.22□□□□□ -1.57
SSRP1Q08945 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
SSRP1Q08945 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC5.22□□□□□ -1.57
SSRP1Q08945 DHX40P1-201ENST00000588725 1412 ntBASIC5.22□□□□□ -1.57
SSRP1Q08945 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
SSRP1Q08945 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
SSRP1Q08945 AL592437.2-201ENST00000421655 2434 ntBASIC5.22□□□□□ -1.57
SSRP1Q08945 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
SSRP1Q08945 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
SSRP1Q08945 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC5.21□□□□□ -1.57
SSRP1Q08945 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
SSRP1Q08945 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
SSRP1Q08945 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC5.21□□□□□ -1.58
SSRP1Q08945 RNU6-1085P-201ENST00000363576 107 ntBASIC5.21□□□□□ -1.58
SSRP1Q08945 RN7SKP224-201ENST00000364140 325 ntBASIC5.21□□□□□ -1.58
SSRP1Q08945 RNY4P16-201ENST00000364768 94 ntBASIC5.21□□□□□ -1.58
SSRP1Q08945 RNU6-867P-201ENST00000364956 107 ntBASIC5.21□□□□□ -1.58
SSRP1Q08945 AC019155.1-201ENST00000382242 574 ntBASIC5.21□□□□□ -1.58
SSRP1Q08945 SNORA20.2-201ENST00000383922 131 ntBASIC5.21□□□□□ -1.58
SSRP1Q08945 Y_RNA.548-201ENST00000384656 105 ntBASIC5.21□□□□□ -1.58
SSRP1Q08945 RNU6-114P-201ENST00000384704 105 ntBASIC5.21□□□□□ -1.58
SSRP1Q08945 RPS16P5-201ENST00000406501 404 ntBASIC5.21□□□□□ -1.58
SSRP1Q08945 AL590139.1-201ENST00000416267 400 ntBASIC5.21□□□□□ -1.58
SSRP1Q08945 AC092832.1-201ENST00000422934 400 ntBASIC5.21□□□□□ -1.58
SSRP1Q08945 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
SSRP1Q08945 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC5.21□□□□□ -1.58
SSRP1Q08945 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC5.21□□□□□ -1.58
SSRP1Q08945 ARL2BPP10-201ENST00000446487 531 ntBASIC5.21□□□□□ -1.58
SSRP1Q08945 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC5.21□□□□□ -1.58
SSRP1Q08945 MTND1P9-201ENST00000453775 944 ntBASIC5.21□□□□□ -1.58
SSRP1Q08945 snoU109.4-201ENST00000458953 143 ntBASIC5.21□□□□□ -1.58
SSRP1Q08945 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC5.21□□□□□ -1.58
SSRP1Q08945 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC5.21□□□□□ -1.58
SSRP1Q08945 AC108043.1-201ENST00000512696 574 ntBASIC5.21□□□□□ -1.58
SSRP1Q08945 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC5.21□□□□□ -1.58
SSRP1Q08945 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC5.21□□□□□ -1.58
SSRP1Q08945 STX3-204ENST00000530221 534 ntTSL 5 BASIC5.21□□□□□ -1.58
SSRP1Q08945 AC118273.2-201ENST00000532092 465 ntBASIC5.21□□□□□ -1.58
SSRP1Q08945 OR8L1P-201ENST00000534005 955 ntBASIC5.21□□□□□ -1.58
SSRP1Q08945 AK6P1-201ENST00000540219 478 ntBASIC5.21□□□□□ -1.58
SSRP1Q08945 AL512310.1-201ENST00000548639 172 ntBASIC5.21□□□□□ -1.58
SSRP1Q08945 SETP7-201ENST00000552169 453 ntBASIC5.21□□□□□ -1.58
SSRP1Q08945 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
SSRP1Q08945 MIR3167-201ENST00000579623 85 ntBASIC5.21□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 136 ms