Protein–RNA interactions for Protein: Q06546

GABPA, GA-binding protein alpha chain, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABPAQ06546 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC3.68□□□□□ -1.82
GABPAQ06546 AC114973.1-201ENST00000429057 632 ntBASIC3.68□□□□□ -1.82
GABPAQ06546 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC3.68□□□□□ -1.82
GABPAQ06546 AC108734.1-201ENST00000439549 399 ntBASIC3.68□□□□□ -1.82
GABPAQ06546 AC092393.1-201ENST00000439625 742 ntBASIC3.68□□□□□ -1.82
GABPAQ06546 MTCO1P53-201ENST00000441633 699 ntBASIC3.68□□□□□ -1.82
GABPAQ06546 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC3.68□□□□□ -1.82
GABPAQ06546 SNORD108-201ENST00000459332 71 ntBASIC3.68□□□□□ -1.82
GABPAQ06546 AP001486.1-201ENST00000463339 476 ntBASIC3.68□□□□□ -1.82
GABPAQ06546 AC010401.1-201ENST00000463867 348 ntBASIC3.68□□□□□ -1.82
GABPAQ06546 AL049873.1-201ENST00000480540 376 ntBASIC3.68□□□□□ -1.82
GABPAQ06546 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC3.68□□□□□ -1.82
GABPAQ06546 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC3.68□□□□□ -1.82
GABPAQ06546 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC3.68□□□□□ -1.82
GABPAQ06546 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC3.68□□□□□ -1.82
GABPAQ06546 AC104057.1-201ENST00000515547 497 ntBASIC3.68□□□□□ -1.82
GABPAQ06546 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC3.68□□□□□ -1.82
GABPAQ06546 AC011602.1-201ENST00000546484 331 ntBASIC3.68□□□□□ -1.82
GABPAQ06546 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC3.68□□□□□ -1.82
GABPAQ06546 AC093519.1-201ENST00000566109 298 ntBASIC3.68□□□□□ -1.82
GABPAQ06546 SNORD39.3-201ENST00000584451 71 ntBASIC3.68□□□□□ -1.82
GABPAQ06546 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC3.68□□□□□ -1.82
GABPAQ06546 AL451007.1-201ENST00000595491 289 ntBASIC3.68□□□□□ -1.82
GABPAQ06546 GAS5-AS1-201ENST00000602767 694 ntBASIC3.68□□□□□ -1.82
GABPAQ06546 AL365400.2-201ENST00000605604 902 ntBASIC3.68□□□□□ -1.82
GABPAQ06546 AC024933.1-201ENST00000608472 348 ntBASIC3.68□□□□□ -1.82
GABPAQ06546 AC121761.2-201ENST00000617300 689 ntBASIC3.68□□□□□ -1.82
GABPAQ06546 AC099506.2-201ENST00000623074 221 ntBASIC3.68□□□□□ -1.82
GABPAQ06546 MFSD8-245ENST00000641743 948 ntBASIC3.68□□□□□ -1.82
GABPAQ06546 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
GABPAQ06546 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
GABPAQ06546 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
GABPAQ06546 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
GABPAQ06546 AC007496.3-201ENST00000624987 3443 ntBASIC3.67□□□□□ -1.82
GABPAQ06546 FER-202ENST00000438717 1531 ntTSL 2 BASIC3.67□□□□□ -1.82
GABPAQ06546 RNU6-1066P-201ENST00000363573 105 ntBASIC3.67□□□□□ -1.82
GABPAQ06546 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC3.67□□□□□ -1.82
GABPAQ06546 RNU6-921P-201ENST00000384361 107 ntBASIC3.67□□□□□ -1.82
GABPAQ06546 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
GABPAQ06546 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
GABPAQ06546 Z98941.1-201ENST00000407764 100 ntBASIC3.67□□□□□ -1.82
GABPAQ06546 RAC1P8-201ENST00000427086 527 ntBASIC3.67□□□□□ -1.82
GABPAQ06546 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC3.67□□□□□ -1.82
GABPAQ06546 NANOGNBP1-201ENST00000448444 480 ntBASIC3.67□□□□□ -1.82
GABPAQ06546 RPL29P29-201ENST00000448725 423 ntBASIC3.67□□□□□ -1.82
GABPAQ06546 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC3.67□□□□□ -1.82
GABPAQ06546 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC3.67□□□□□ -1.82
GABPAQ06546 AC104164.3-201ENST00000467363 1258 ntBASIC3.67□□□□□ -1.82
GABPAQ06546 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC3.67□□□□□ -1.82
GABPAQ06546 TMED11P-201ENST00000479478 690 ntBASIC3.67□□□□□ -1.82
GABPAQ06546 AC069528.1-202ENST00000482888 637 ntBASIC3.67□□□□□ -1.82
GABPAQ06546 RPS3AP14-201ENST00000483907 780 ntBASIC3.67□□□□□ -1.82
GABPAQ06546 RNF138P1-201ENST00000502765 546 ntBASIC3.67□□□□□ -1.82
GABPAQ06546 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC3.67□□□□□ -1.82
GABPAQ06546 RNA5SP309-201ENST00000516670 106 ntBASIC3.67□□□□□ -1.82
GABPAQ06546 RN7SKP60-201ENST00000516985 239 ntBASIC3.67□□□□□ -1.82
GABPAQ06546 IGKV2D-23-201ENST00000518179 286 ntBASIC3.67□□□□□ -1.82
GABPAQ06546 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC3.67□□□□□ -1.82
GABPAQ06546 NDUFB9P3-201ENST00000521269 501 ntBASIC3.67□□□□□ -1.82
GABPAQ06546 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC3.67□□□□□ -1.82
GABPAQ06546 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC3.67□□□□□ -1.82
GABPAQ06546 AP002404.1-201ENST00000532005 451 ntBASIC3.67□□□□□ -1.82
GABPAQ06546 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC3.67□□□□□ -1.82
GABPAQ06546 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC3.67□□□□□ -1.82
GABPAQ06546 OR4G1P-201ENST00000588632 938 ntBASIC3.67□□□□□ -1.82
GABPAQ06546 AC093732.2-201ENST00000607950 274 ntBASIC3.67□□□□□ -1.82
GABPAQ06546 PART1_2.1-201ENST00000612397 250 ntBASIC3.67□□□□□ -1.82
GABPAQ06546 AC006213.4-201ENST00000616184 634 ntBASIC3.67□□□□□ -1.82
GABPAQ06546 AC123767.1-202ENST00000620407 817 ntBASIC3.67□□□□□ -1.82
GABPAQ06546 AC006065.5-201ENST00000623427 349 ntBASIC3.67□□□□□ -1.82
GABPAQ06546 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC3.67□□□□□ -1.82
GABPAQ06546 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
GABPAQ06546 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC3.67□□□□□ -1.82
GABPAQ06546 IL23R-202ENST00000395227 1459 ntTSL 3 BASIC3.67□□□□□ -1.82
GABPAQ06546 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC3.66□□□□□ -1.82
GABPAQ06546 AC117529.2-201ENST00000512159 2068 ntBASIC3.66□□□□□ -1.82
GABPAQ06546 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.66□□□□□ -1.82
GABPAQ06546 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
GABPAQ06546 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
GABPAQ06546 RNU6-707P-201ENST00000364647 95 ntBASIC3.66□□□□□ -1.82
GABPAQ06546 RNU1-140P-201ENST00000365040 165 ntBASIC3.66□□□□□ -1.82
GABPAQ06546 VN1R51P-201ENST00000411675 945 ntBASIC3.66□□□□□ -1.82
GABPAQ06546 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC3.66□□□□□ -1.82
GABPAQ06546 BOLA3P4-201ENST00000418151 400 ntBASIC3.66□□□□□ -1.82
GABPAQ06546 RPL35AP12-201ENST00000425362 338 ntBASIC3.66□□□□□ -1.82
GABPAQ06546 MTCO1P3-201ENST00000429327 192 ntBASIC3.66□□□□□ -1.82
GABPAQ06546 AC005345.1-201ENST00000431868 217 ntBASIC3.66□□□□□ -1.82
GABPAQ06546 SEPT7P5-201ENST00000434048 306 ntBASIC3.66□□□□□ -1.82
GABPAQ06546 BX679664.1-201ENST00000434429 253 ntBASIC3.66□□□□□ -1.82
GABPAQ06546 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC3.66□□□□□ -1.82
GABPAQ06546 AC093155.1-201ENST00000440164 826 ntBASIC3.66□□□□□ -1.82
GABPAQ06546 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC3.66□□□□□ -1.82
GABPAQ06546 EXOSC3P1-201ENST00000448649 500 ntBASIC3.66□□□□□ -1.82
GABPAQ06546 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC3.66□□□□□ -1.82
GABPAQ06546 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC3.66□□□□□ -1.82
GABPAQ06546 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC3.66□□□□□ -1.82
GABPAQ06546 AC092470.1-201ENST00000546187 132 ntBASIC3.66□□□□□ -1.82
GABPAQ06546 LYZ-203ENST00000549690 669 ntTSL 2 BASIC3.66□□□□□ -1.82
GABPAQ06546 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC3.66□□□□□ -1.82
GABPAQ06546 MIR4509-3-201ENST00000578671 94 ntBASIC3.66□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 81.8 ms