Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
TPM4P67936 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC3.04□□□□□ -1.92
TPM4P67936 AL133304.2-201ENST00000546376 886 ntTSL 2 BASIC3.04□□□□□ -1.92
TPM4P67936 EIF5A2P1-201ENST00000564027 460 ntBASIC3.04□□□□□ -1.92
TPM4P67936 AC090312.2-201ENST00000582687 378 ntBASIC3.04□□□□□ -1.92
TPM4P67936 XIAPP1-201ENST00000603162 600 ntBASIC3.04□□□□□ -1.92
TPM4P67936 AC011374.2-201ENST00000607135 526 ntBASIC3.04□□□□□ -1.92
TPM4P67936 U6.107-201ENST00000637108 79 ntBASIC3.04□□□□□ -1.92
TPM4P67936 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC3.03□□□□□ -1.92
TPM4P67936 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC3.03□□□□□ -1.92
TPM4P67936 AC091564.4-201ENST00000533934 2194 ntBASIC3.03□□□□□ -1.92
TPM4P67936 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
TPM4P67936 RNU6-799P-201ENST00000363567 107 ntBASIC3.03□□□□□ -1.92
TPM4P67936 RNA5SP267-201ENST00000364893 126 ntBASIC3.03□□□□□ -1.92
TPM4P67936 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.92
TPM4P67936 RNU6-1027P-201ENST00000383998 107 ntBASIC3.03□□□□□ -1.92
TPM4P67936 HMGN2P35-201ENST00000412164 270 ntBASIC3.03□□□□□ -1.92
TPM4P67936 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC3.03□□□□□ -1.92
TPM4P67936 AC097499.1-201ENST00000444277 208 ntBASIC3.03□□□□□ -1.92
TPM4P67936 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC3.03□□□□□ -1.92
TPM4P67936 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC3.03□□□□□ -1.92
TPM4P67936 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC3.03□□□□□ -1.92
TPM4P67936 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC3.03□□□□□ -1.92
TPM4P67936 RN7SL807P-201ENST00000470923 297 ntBASIC3.03□□□□□ -1.92
TPM4P67936 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC3.03□□□□□ -1.92
TPM4P67936 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC3.03□□□□□ -1.92
TPM4P67936 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC3.03□□□□□ -1.92
TPM4P67936 AC008687.2-201ENST00000597865 520 ntBASIC3.03□□□□□ -1.92
TPM4P67936 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC3.03□□□□□ -1.92
TPM4P67936 MIR6810-201ENST00000622701 70 ntBASIC3.03□□□□□ -1.92
TPM4P67936 AC095031.1-201ENST00000623685 672 ntBASIC3.03□□□□□ -1.92
TPM4P67936 AC034229.5-201ENST00000624258 185 ntBASIC3.03□□□□□ -1.92
TPM4P67936 AC097372.4-201ENST00000625025 466 ntBASIC3.03□□□□□ -1.92
TPM4P67936 AL121594.5-201ENST00000631724 573 ntBASIC3.03□□□□□ -1.92
TPM4P67936 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC3.03□□□□□ -1.92
TPM4P67936 Clostridiales-1.2-201ENST00000636724 160 ntBASIC3.03□□□□□ -1.92
TPM4P67936 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC3.03□□□□□ -1.92
TPM4P67936 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC3.02□□□□□ -1.93
TPM4P67936 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC3.02□□□□□ -1.93
TPM4P67936 RNA5SP258-201ENST00000362750 119 ntBASIC3.02□□□□□ -1.93
TPM4P67936 MIR449B-201ENST00000384995 97 ntBASIC3.02□□□□□ -1.93
TPM4P67936 RAP1BP1-201ENST00000412709 553 ntBASIC3.02□□□□□ -1.93
TPM4P67936 AL606495.1-201ENST00000422100 813 ntBASIC3.02□□□□□ -1.93
TPM4P67936 AL158156.1-201ENST00000422509 473 ntBASIC3.02□□□□□ -1.93
TPM4P67936 AL513321.1-201ENST00000441175 761 ntBASIC3.02□□□□□ -1.93
TPM4P67936 PRDX3P3-201ENST00000447765 522 ntBASIC3.02□□□□□ -1.93
TPM4P67936 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC3.02□□□□□ -1.93
TPM4P67936 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC3.02□□□□□ -1.93
TPM4P67936 RN7SL504P-201ENST00000494496 287 ntBASIC3.02□□□□□ -1.93
TPM4P67936 RN7SKP57-201ENST00000517248 293 ntBASIC3.02□□□□□ -1.93
TPM4P67936 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC3.02□□□□□ -1.93
TPM4P67936 OR7K1P-201ENST00000546439 926 ntBASIC3.02□□□□□ -1.93
TPM4P67936 AC125611.2-201ENST00000551907 647 ntBASIC3.02□□□□□ -1.93
TPM4P67936 AL121603.1-201ENST00000553815 142 ntBASIC3.02□□□□□ -1.93
TPM4P67936 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC3.02□□□□□ -1.93
TPM4P67936 LINC00911-201ENST00000555272 546 ntTSL 2 BASIC3.02□□□□□ -1.93
TPM4P67936 AADACP1-206ENST00000561502 1193 ntBASIC3.02□□□□□ -1.93
TPM4P67936 AC006539.2-201ENST00000601729 572 ntBASIC3.02□□□□□ -1.93
TPM4P67936 AC091057.2-201ENST00000602594 792 ntBASIC3.02□□□□□ -1.93
TPM4P67936 AC024153.1-201ENST00000603103 365 ntBASIC3.02□□□□□ -1.93
TPM4P67936 DLEU2_6.1-201ENST00000610536 112 ntBASIC3.02□□□□□ -1.93
TPM4P67936 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC3.02□□□□□ -1.93
TPM4P67936 AC023490.1-202ENST00000620909 820 ntTSL 5 BASIC3.02□□□□□ -1.93
TPM4P67936 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC3.02□□□□□ -1.93
TPM4P67936 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC3.02□□□□□ -1.93
TPM4P67936 POMP-202ENST00000460403 1428 ntTSL 3 BASIC3.02□□□□□ -1.93
TPM4P67936 MIR6073-201ENST00000352083 89 ntBASIC3.01□□□□□ -1.93
TPM4P67936 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
TPM4P67936 AC006548.1-201ENST00000427470 102 ntBASIC3.01□□□□□ -1.93
TPM4P67936 GCA-203ENST00000429691 824 ntTSL 3 BASIC3.01□□□□□ -1.93
TPM4P67936 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC3.01□□□□□ -1.93
TPM4P67936 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC3.01□□□□□ -1.93
TPM4P67936 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC3.01□□□□□ -1.93
TPM4P67936 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC3.01□□□□□ -1.93
TPM4P67936 AC093156.1-201ENST00000440382 670 ntBASIC3.01□□□□□ -1.93
TPM4P67936 AC233982.1-201ENST00000451247 436 ntBASIC3.01□□□□□ -1.93
TPM4P67936 RPS29P12-201ENST00000460178 152 ntBASIC3.01□□□□□ -1.93
TPM4P67936 KC877373.1-201ENST00000479066 408 ntBASIC3.01□□□□□ -1.93
TPM4P67936 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC3.01□□□□□ -1.93
TPM4P67936 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC3.01□□□□□ -1.93
TPM4P67936 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC3.01□□□□□ -1.93
TPM4P67936 AC092470.1-201ENST00000546187 132 ntBASIC3.01□□□□□ -1.93
TPM4P67936 AC084033.1-201ENST00000550830 633 ntBASIC3.01□□□□□ -1.93
TPM4P67936 AL391156.1-201ENST00000554965 554 ntBASIC3.01□□□□□ -1.93
TPM4P67936 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC3.01□□□□□ -1.93
TPM4P67936 AC005412.1-201ENST00000580812 1049 ntBASIC3.01□□□□□ -1.93
TPM4P67936 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC3.01□□□□□ -1.93
TPM4P67936 AC124312.4-201ENST00000605533 310 ntBASIC3.01□□□□□ -1.93
TPM4P67936 CR381572.1-201ENST00000625098 102 ntBASIC3.01□□□□□ -1.93
TPM4P67936 ZNF271P-202ENST00000465539 1970 ntBASIC3.01□□□□□ -1.93
TPM4P67936 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC3.01□□□□□ -1.93
TPM4P67936 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC3.01□□□□□ -1.93
TPM4P67936 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3□□□□□ -1.93
TPM4P67936 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC3□□□□□ -1.93
TPM4P67936 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3□□□□□ -1.93
TPM4P67936 SNORA38.1-201ENST00000364172 131 ntBASIC3□□□□□ -1.93
TPM4P67936 RNA5SP72-201ENST00000364442 117 ntBASIC3□□□□□ -1.93
TPM4P67936 RNU1-100P-201ENST00000365255 165 ntBASIC3□□□□□ -1.93
TPM4P67936 RNU6-339P-201ENST00000384310 107 ntBASIC3□□□□□ -1.93
TPM4P67936 UQCRFS1P3-201ENST00000407697 385 ntBASIC3□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 100.2 ms