Protein–RNA interactions for Protein: P61968

LMO4, LIM domain transcription factor LMO4, humanhuman

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4P61968 U8.12-201ENST00000384701 133 ntBASIC3.24□□□□□ -1.89
LMO4P61968 CYCSP45-201ENST00000402289 315 ntBASIC3.24□□□□□ -1.89
LMO4P61968 AC073264.1-201ENST00000411508 416 ntBASIC3.24□□□□□ -1.89
LMO4P61968 RPS7P13-201ENST00000413955 498 ntBASIC3.24□□□□□ -1.89
LMO4P61968 FNDC3CP-201ENST00000420795 1155 ntBASIC3.24□□□□□ -1.89
LMO4P61968 EIF1P1-201ENST00000421436 341 ntBASIC3.24□□□□□ -1.89
LMO4P61968 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC3.24□□□□□ -1.89
LMO4P61968 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC3.24□□□□□ -1.89
LMO4P61968 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
LMO4P61968 Z93242.1-201ENST00000427102 353 ntBASIC3.24□□□□□ -1.89
LMO4P61968 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC3.24□□□□□ -1.89
LMO4P61968 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
LMO4P61968 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC3.24□□□□□ -1.89
LMO4P61968 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC3.24□□□□□ -1.89
LMO4P61968 MTND4P25-201ENST00000441039 533 ntBASIC3.24□□□□□ -1.89
LMO4P61968 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC3.24□□□□□ -1.89
LMO4P61968 AL592447.1-201ENST00000447592 540 ntBASIC3.24□□□□□ -1.89
LMO4P61968 AL358232.1-201ENST00000448030 501 ntBASIC3.24□□□□□ -1.89
LMO4P61968 RPL23AP35-201ENST00000451906 501 ntBASIC3.24□□□□□ -1.89
LMO4P61968 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
LMO4P61968 AL645939.1-201ENST00000453429 797 ntBASIC3.24□□□□□ -1.89
LMO4P61968 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC3.24□□□□□ -1.89
LMO4P61968 U8.18-201ENST00000459285 133 ntBASIC3.24□□□□□ -1.89
LMO4P61968 RPL7P15-201ENST00000461190 712 ntBASIC3.24□□□□□ -1.89
LMO4P61968 AC126182.1-201ENST00000478134 357 ntBASIC3.24□□□□□ -1.89
LMO4P61968 ARL2BPP4-201ENST00000506854 471 ntBASIC3.24□□□□□ -1.89
LMO4P61968 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC3.24□□□□□ -1.89
LMO4P61968 AC017037.1-201ENST00000508460 471 ntBASIC3.24□□□□□ -1.89
LMO4P61968 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC3.24□□□□□ -1.89
LMO4P61968 AC093281.2-201ENST00000510153 597 ntBASIC3.24□□□□□ -1.89
LMO4P61968 AC048346.1-201ENST00000510247 144 ntBASIC3.24□□□□□ -1.89
LMO4P61968 AC018797.3-201ENST00000513388 1241 ntBASIC3.24□□□□□ -1.89
LMO4P61968 IGKV2-38-201ENST00000517443 247 ntBASIC3.24□□□□□ -1.89
LMO4P61968 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
LMO4P61968 AP003392.2-201ENST00000527269 208 ntBASIC3.24□□□□□ -1.89
LMO4P61968 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
LMO4P61968 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC3.24□□□□□ -1.89
LMO4P61968 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC3.24□□□□□ -1.89
LMO4P61968 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC3.24□□□□□ -1.89
LMO4P61968 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC3.24□□□□□ -1.89
LMO4P61968 AL390838.2-201ENST00000602394 274 ntBASIC3.24□□□□□ -1.89
LMO4P61968 AL606834.2-201ENST00000602954 668 ntBASIC3.24□□□□□ -1.89
LMO4P61968 AC007566.2-201ENST00000603642 413 ntBASIC3.24□□□□□ -1.89
LMO4P61968 AC069234.5-201ENST00000611056 416 ntBASIC3.24□□□□□ -1.89
LMO4P61968 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
LMO4P61968 AC005344.1-201ENST00000613391 459 ntBASIC3.24□□□□□ -1.89
LMO4P61968 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC3.24□□□□□ -1.89
LMO4P61968 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC3.24□□□□□ -1.89
LMO4P61968 AC006065.5-201ENST00000623427 349 ntBASIC3.24□□□□□ -1.89
LMO4P61968 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
LMO4P61968 AC019226.1-201ENST00000625666 515 ntBASIC3.24□□□□□ -1.89
LMO4P61968 AC099654.12-201ENST00000639868 649 ntBASIC3.24□□□□□ -1.89
LMO4P61968 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC3.24□□□□□ -1.89
LMO4P61968 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC3.24□□□□□ -1.89
LMO4P61968 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
LMO4P61968 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC3.24□□□□□ -1.89
LMO4P61968 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
LMO4P61968 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC3.23□□□□□ -1.89
LMO4P61968 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC3.23□□□□□ -1.89
LMO4P61968 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
LMO4P61968 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
LMO4P61968 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC3.23□□□□□ -1.89
LMO4P61968 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC3.23□□□□□ -1.89
LMO4P61968 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
LMO4P61968 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
LMO4P61968 SNORA71.3-201ENST00000362582 128 ntBASIC3.23□□□□□ -1.89
LMO4P61968 RNU6-839P-201ENST00000363347 108 ntBASIC3.23□□□□□ -1.89
LMO4P61968 RNU6-374P-201ENST00000364146 108 ntBASIC3.23□□□□□ -1.89
LMO4P61968 Y_RNA.248-201ENST00000364501 109 ntBASIC3.23□□□□□ -1.89
LMO4P61968 RNU4-91P-201ENST00000364778 135 ntBASIC3.23□□□□□ -1.89
LMO4P61968 Y_RNA.302-201ENST00000364997 102 ntBASIC3.23□□□□□ -1.89
LMO4P61968 SSXP10-201ENST00000402595 565 ntBASIC3.23□□□□□ -1.89
LMO4P61968 MIR1250-201ENST00000408098 113 ntBASIC3.23□□□□□ -1.89
LMO4P61968 MIR548F1-201ENST00000408667 84 ntBASIC3.23□□□□□ -1.89
LMO4P61968 AC068533.2-201ENST00000411872 306 ntBASIC3.23□□□□□ -1.89
LMO4P61968 RPS3AP9-201ENST00000417027 792 ntBASIC3.23□□□□□ -1.89
LMO4P61968 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC3.23□□□□□ -1.89
LMO4P61968 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC3.23□□□□□ -1.89
LMO4P61968 AC096632.1-201ENST00000427395 310 ntBASIC3.23□□□□□ -1.89
LMO4P61968 AL451062.2-201ENST00000427515 271 ntBASIC3.23□□□□□ -1.89
LMO4P61968 RPL31P54-201ENST00000429803 370 ntBASIC3.23□□□□□ -1.89
LMO4P61968 CKS1BP5-201ENST00000434172 273 ntBASIC3.23□□□□□ -1.89
LMO4P61968 AL596276.1-201ENST00000434465 418 ntBASIC3.23□□□□□ -1.89
LMO4P61968 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC3.23□□□□□ -1.89
LMO4P61968 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC3.23□□□□□ -1.89
LMO4P61968 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC3.23□□□□□ -1.89
LMO4P61968 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
LMO4P61968 COX6CP12-201ENST00000446748 202 ntBASIC3.23□□□□□ -1.89
LMO4P61968 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC3.23□□□□□ -1.89
LMO4P61968 AC093392.2-201ENST00000450682 337 ntBASIC3.23□□□□□ -1.89
LMO4P61968 AC027673.1-201ENST00000456245 405 ntBASIC3.23□□□□□ -1.89
LMO4P61968 NF1P3-201ENST00000457709 450 ntBASIC3.23□□□□□ -1.89
LMO4P61968 RNA5SP269-201ENST00000459032 137 ntBASIC3.23□□□□□ -1.89
LMO4P61968 AC146507.1-201ENST00000468335 354 ntBASIC3.23□□□□□ -1.89
LMO4P61968 RPL7L1P8-201ENST00000469911 741 ntBASIC3.23□□□□□ -1.89
LMO4P61968 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC3.23□□□□□ -1.89
LMO4P61968 SETP14-201ENST00000497538 873 ntBASIC3.23□□□□□ -1.89
LMO4P61968 AC138853.1-201ENST00000503549 823 ntBASIC3.23□□□□□ -1.89
LMO4P61968 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC3.23□□□□□ -1.89
LMO4P61968 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC3.23□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 80.1 ms