Protein–RNA interactions for Protein: P56589

PEX3, Peroxisomal biogenesis factor 3, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX3P56589 OR8K4P-201ENST00000534608 872 ntBASIC3.55□□□□□ -1.84
PEX3P56589 AL389895.1-201ENST00000554127 252 ntBASIC3.55□□□□□ -1.84
PEX3P56589 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC3.55□□□□□ -1.84
PEX3P56589 MTCYBP28-201ENST00000566728 1132 ntBASIC3.55□□□□□ -1.84
PEX3P56589 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC3.55□□□□□ -1.84
PEX3P56589 AC022069.1-201ENST00000582910 658 ntBASIC3.55□□□□□ -1.84
PEX3P56589 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC3.55□□□□□ -1.84
PEX3P56589 BNIP3P22-201ENST00000593399 556 ntBASIC3.55□□□□□ -1.84
PEX3P56589 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC3.55□□□□□ -1.84
PEX3P56589 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC3.55□□□□□ -1.84
PEX3P56589 AL355816.2-201ENST00000610049 647 ntBASIC3.55□□□□□ -1.84
PEX3P56589 AL450489.1-201ENST00000612071 468 ntBASIC3.55□□□□□ -1.84
PEX3P56589 AK6-205ENST00000618980 483 ntTSL 2 BASIC3.55□□□□□ -1.84
PEX3P56589 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC3.55□□□□□ -1.84
PEX3P56589 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
PEX3P56589 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.54□□□□□ -1.84
PEX3P56589 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
PEX3P56589 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC3.54□□□□□ -1.84
PEX3P56589 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
PEX3P56589 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
PEX3P56589 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
PEX3P56589 RNU4-92P-201ENST00000363783 136 ntBASIC3.54□□□□□ -1.84
PEX3P56589 AC007390.1-201ENST00000415722 356 ntBASIC3.54□□□□□ -1.84
PEX3P56589 AC092634.6-201ENST00000418558 192 ntBASIC3.54□□□□□ -1.84
PEX3P56589 GLRXP1-201ENST00000423261 334 ntBASIC3.54□□□□□ -1.84
PEX3P56589 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC3.54□□□□□ -1.84
PEX3P56589 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC3.54□□□□□ -1.84
PEX3P56589 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC3.54□□□□□ -1.84
PEX3P56589 EEF1A1P39-201ENST00000440791 250 ntBASIC3.54□□□□□ -1.84
PEX3P56589 AC004022.1-201ENST00000447766 1066 ntBASIC3.54□□□□□ -1.84
PEX3P56589 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC3.54□□□□□ -1.84
PEX3P56589 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC3.54□□□□□ -1.84
PEX3P56589 AC092155.2-201ENST00000454675 477 ntBASIC3.54□□□□□ -1.84
PEX3P56589 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC3.54□□□□□ -1.84
PEX3P56589 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC3.54□□□□□ -1.84
PEX3P56589 HMGN1P18-201ENST00000457642 277 ntBASIC3.54□□□□□ -1.84
PEX3P56589 SNORD11.1-201ENST00000459482 85 ntBASIC3.54□□□□□ -1.84
PEX3P56589 AC010468.1-201ENST00000461022 817 ntBASIC3.54□□□□□ -1.84
PEX3P56589 RN7SL504P-201ENST00000494496 287 ntBASIC3.54□□□□□ -1.84
PEX3P56589 AC084024.2-201ENST00000503480 791 ntBASIC3.54□□□□□ -1.84
PEX3P56589 PHBP14-201ENST00000512887 367 ntBASIC3.54□□□□□ -1.84
PEX3P56589 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC3.54□□□□□ -1.84
PEX3P56589 HIGD1AP10-201ENST00000527837 282 ntBASIC3.54□□□□□ -1.84
PEX3P56589 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC3.54□□□□□ -1.84
PEX3P56589 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC3.54□□□□□ -1.84
PEX3P56589 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC3.54□□□□□ -1.84
PEX3P56589 AC023813.2-201ENST00000564321 469 ntBASIC3.54□□□□□ -1.84
PEX3P56589 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC3.54□□□□□ -1.84
PEX3P56589 AC016877.3-201ENST00000606778 504 ntBASIC3.54□□□□□ -1.84
PEX3P56589 STARD13-AS-235ENST00000609335 855 ntTSL 5 BASIC3.54□□□□□ -1.84
PEX3P56589 AL442067.2-201ENST00000614033 363 ntBASIC3.54□□□□□ -1.84
PEX3P56589 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC3.54□□□□□ -1.84
PEX3P56589 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC3.54□□□□□ -1.84
PEX3P56589 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC3.54□□□□□ -1.84
PEX3P56589 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC3.54□□□□□ -1.84
PEX3P56589 MIR3651-201ENST00000630427 90 ntBASIC3.54□□□□□ -1.84
PEX3P56589 AC008993.2-201ENST00000631744 806 ntBASIC3.54□□□□□ -1.84
PEX3P56589 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC3.54□□□□□ -1.84
PEX3P56589 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
PEX3P56589 AC117529.2-201ENST00000512159 2068 ntBASIC3.54□□□□□ -1.84
PEX3P56589 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
PEX3P56589 MTND5P28-201ENST00000438005 1594 ntBASIC3.54□□□□□ -1.84
PEX3P56589 AC091152.2-201ENST00000591628 2569 ntBASIC3.54□□□□□ -1.84
PEX3P56589 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC3.54□□□□□ -1.84
PEX3P56589 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
PEX3P56589 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
PEX3P56589 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
PEX3P56589 AC073346.2-201ENST00000624724 2058 ntBASIC3.53□□□□□ -1.84
PEX3P56589 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.53□□□□□ -1.84
PEX3P56589 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
PEX3P56589 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
PEX3P56589 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
PEX3P56589 RNU6-1243P-201ENST00000364028 107 ntBASIC3.53□□□□□ -1.84
PEX3P56589 SNORA38.1-201ENST00000364172 131 ntBASIC3.53□□□□□ -1.84
PEX3P56589 RNU6-115P-201ENST00000364310 107 ntBASIC3.53□□□□□ -1.84
PEX3P56589 RNU4-68P-201ENST00000364314 141 ntBASIC3.53□□□□□ -1.84
PEX3P56589 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
PEX3P56589 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC3.53□□□□□ -1.84
PEX3P56589 SSR1P2-201ENST00000415208 787 ntBASIC3.53□□□□□ -1.84
PEX3P56589 BOLA3P4-201ENST00000418151 400 ntBASIC3.53□□□□□ -1.84
PEX3P56589 AC007435.1-201ENST00000421086 415 ntBASIC3.53□□□□□ -1.84
PEX3P56589 AC092832.1-201ENST00000422934 400 ntBASIC3.53□□□□□ -1.84
PEX3P56589 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC3.53□□□□□ -1.84
PEX3P56589 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC3.53□□□□□ -1.84
PEX3P56589 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC3.53□□□□□ -1.84
PEX3P56589 MTCYBP31-201ENST00000438855 1122 ntBASIC3.53□□□□□ -1.84
PEX3P56589 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC3.53□□□□□ -1.84
PEX3P56589 Z77249.1-201ENST00000444622 1175 ntBASIC3.53□□□□□ -1.84
PEX3P56589 AC087312.1-201ENST00000471411 480 ntBASIC3.53□□□□□ -1.84
PEX3P56589 AC109925.1-201ENST00000478069 331 ntBASIC3.53□□□□□ -1.84
PEX3P56589 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC3.53□□□□□ -1.84
PEX3P56589 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC3.53□□□□□ -1.84
PEX3P56589 CA1-215ENST00000522389 551 ntTSL 3 BASIC3.53□□□□□ -1.84
PEX3P56589 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC3.53□□□□□ -1.84
PEX3P56589 AP001636.2-201ENST00000525517 696 ntBASIC3.53□□□□□ -1.84
PEX3P56589 AP001317.1-201ENST00000531194 960 ntBASIC3.53□□□□□ -1.84
PEX3P56589 CFL2-206ENST00000556161 546 ntTSL 4 BASIC3.53□□□□□ -1.84
PEX3P56589 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC3.53□□□□□ -1.84
PEX3P56589 YPEL5P2-201ENST00000605553 359 ntBASIC3.53□□□□□ -1.84
PEX3P56589 AP003117.2-201ENST00000606010 545 ntBASIC3.53□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 142.7 ms