Protein–RNA interactions for Protein: P56524

HDAC4, Histone deacetylase 4, humanhuman

Predictions only

Length 1,084 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4P56524 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC4.13□□□□□ -1.75
HDAC4P56524 AC006499.2-201ENST00000513470 337 ntBASIC4.13□□□□□ -1.75
HDAC4P56524 AC117532.1-201ENST00000514638 323 ntBASIC4.13□□□□□ -1.75
HDAC4P56524 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC4.13□□□□□ -1.75
HDAC4P56524 AC008802.1-201ENST00000519121 791 ntBASIC4.13□□□□□ -1.75
HDAC4P56524 AC087369.1-201ENST00000520775 996 ntBASIC4.13□□□□□ -1.75
HDAC4P56524 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC4.13□□□□□ -1.75
HDAC4P56524 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC4.13□□□□□ -1.75
HDAC4P56524 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC4.13□□□□□ -1.75
HDAC4P56524 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC4.13□□□□□ -1.75
HDAC4P56524 DEFB131D-201ENST00000526803 184 ntBASIC4.13□□□□□ -1.75
HDAC4P56524 AKIRIN1P1-201ENST00000547384 544 ntBASIC4.13□□□□□ -1.75
HDAC4P56524 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC4.13□□□□□ -1.75
HDAC4P56524 CYCSP2-201ENST00000558168 301 ntBASIC4.13□□□□□ -1.75
HDAC4P56524 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC4.13□□□□□ -1.75
HDAC4P56524 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC4.13□□□□□ -1.75
HDAC4P56524 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC4.13□□□□□ -1.75
HDAC4P56524 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC4.13□□□□□ -1.75
HDAC4P56524 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC4.13□□□□□ -1.75
HDAC4P56524 U7.8-201ENST00000619968 63 ntBASIC4.13□□□□□ -1.75
HDAC4P56524 AC231657.1-201ENST00000624313 397 ntBASIC4.13□□□□□ -1.75
HDAC4P56524 PCMTD1P7-201ENST00000634506 357 ntBASIC4.13□□□□□ -1.75
HDAC4P56524 AC138649.5-201ENST00000637456 137 ntBASIC4.13□□□□□ -1.75
HDAC4P56524 AL359893.1-201ENST00000447628 1580 ntBASIC4.13□□□□□ -1.75
HDAC4P56524 AC011477.1-204ENST00000623416 1325 ntBASIC4.13□□□□□ -1.75
HDAC4P56524 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
HDAC4P56524 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
HDAC4P56524 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
HDAC4P56524 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC4.12□□□□□ -1.75
HDAC4P56524 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC4.12□□□□□ -1.75
HDAC4P56524 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
HDAC4P56524 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC4.12□□□□□ -1.75
HDAC4P56524 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
HDAC4P56524 RNU6-433P-201ENST00000363216 104 ntBASIC4.12□□□□□ -1.75
HDAC4P56524 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
HDAC4P56524 AL031577.2-201ENST00000404133 280 ntBASIC4.12□□□□□ -1.75
HDAC4P56524 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
HDAC4P56524 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC4.12□□□□□ -1.75
HDAC4P56524 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC4.12□□□□□ -1.75
HDAC4P56524 AC026410.2-201ENST00000460281 156 ntBASIC4.12□□□□□ -1.75
HDAC4P56524 AP000873.1-201ENST00000463987 400 ntBASIC4.12□□□□□ -1.75
HDAC4P56524 AL136126.1-201ENST00000473603 402 ntBASIC4.12□□□□□ -1.75
HDAC4P56524 AL049830.2-201ENST00000480072 201 ntBASIC4.12□□□□□ -1.75
HDAC4P56524 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC4.12□□□□□ -1.75
HDAC4P56524 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
HDAC4P56524 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC4.12□□□□□ -1.75
HDAC4P56524 AC108064.1-201ENST00000513791 460 ntBASIC4.12□□□□□ -1.75
HDAC4P56524 RN7SKP116-201ENST00000516902 319 ntBASIC4.12□□□□□ -1.75
HDAC4P56524 RNA5SP179-201ENST00000517284 121 ntBASIC4.12□□□□□ -1.75
HDAC4P56524 IGKV2D-36-201ENST00000518643 226 ntBASIC4.12□□□□□ -1.75
HDAC4P56524 NDUFA5P2-201ENST00000519723 344 ntBASIC4.12□□□□□ -1.75
HDAC4P56524 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC4.12□□□□□ -1.75
HDAC4P56524 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC4.12□□□□□ -1.75
HDAC4P56524 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC4.12□□□□□ -1.75
HDAC4P56524 VN1R92P-201ENST00000598511 928 ntBASIC4.12□□□□□ -1.75
HDAC4P56524 BNIP3P11-201ENST00000603878 563 ntBASIC4.12□□□□□ -1.75
HDAC4P56524 AC091167.4-201ENST00000605079 184 ntBASIC4.12□□□□□ -1.75
HDAC4P56524 AC105129.3-201ENST00000605455 485 ntBASIC4.12□□□□□ -1.75
HDAC4P56524 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
HDAC4P56524 RNA5SP196-201ENST00000625967 102 ntBASIC4.12□□□□□ -1.75
HDAC4P56524 U6.101-201ENST00000637707 76 ntBASIC4.12□□□□□ -1.75
HDAC4P56524 AP001486.2-201ENST00000561652 5113 ntBASIC4.12□□□□□ -1.75
HDAC4P56524 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
HDAC4P56524 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC4.11□□□□□ -1.75
HDAC4P56524 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
HDAC4P56524 ELL2P3-201ENST00000457883 1602 ntBASIC4.11□□□□□ -1.75
HDAC4P56524 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
HDAC4P56524 CR381670.1-201ENST00000624291 1693 ntBASIC4.11□□□□□ -1.75
HDAC4P56524 SPRR2C-201ENST00000290702 219 ntBASIC4.11□□□□□ -1.75
HDAC4P56524 Y_RNA.318-201ENST00000365131 97 ntBASIC4.11□□□□□ -1.75
HDAC4P56524 CRP-203ENST00000368111 512 ntTSL 3 BASIC4.11□□□□□ -1.75
HDAC4P56524 PTMAP5-201ENST00000393073 333 ntBASIC4.11□□□□□ -1.75
HDAC4P56524 AC016769.3-201ENST00000396562 315 ntBASIC4.11□□□□□ -1.75
HDAC4P56524 ARF4P3-201ENST00000397387 509 ntBASIC4.11□□□□□ -1.75
HDAC4P56524 RNU6-920P-201ENST00000410926 92 ntBASIC4.11□□□□□ -1.75
HDAC4P56524 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC4.11□□□□□ -1.75
HDAC4P56524 RPL7AP73-201ENST00000413490 353 ntBASIC4.11□□□□□ -1.75
HDAC4P56524 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
HDAC4P56524 AL953862.1-201ENST00000423016 168 ntBASIC4.11□□□□□ -1.75
HDAC4P56524 TEX41-204ENST00000423031 491 ntTSL 4 BASIC4.11□□□□□ -1.75
HDAC4P56524 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC4.11□□□□□ -1.75
HDAC4P56524 OFD1P12Y-201ENST00000427963 1207 ntBASIC4.11□□□□□ -1.75
HDAC4P56524 AL035407.1-201ENST00000429211 571 ntBASIC4.11□□□□□ -1.75
HDAC4P56524 KCTD9P3-201ENST00000434597 1169 ntBASIC4.11□□□□□ -1.75
HDAC4P56524 HMGB1P37-201ENST00000439613 609 ntBASIC4.11□□□□□ -1.75
HDAC4P56524 AL356535.1-201ENST00000440335 398 ntBASIC4.11□□□□□ -1.75
HDAC4P56524 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC4.11□□□□□ -1.75
HDAC4P56524 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC4.11□□□□□ -1.75
HDAC4P56524 VN1R34P-201ENST00000447387 883 ntBASIC4.11□□□□□ -1.75
HDAC4P56524 HMGN2P21-201ENST00000447764 270 ntBASIC4.11□□□□□ -1.75
HDAC4P56524 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC4.11□□□□□ -1.75
HDAC4P56524 SUN3-208ENST00000453192 801 ntTSL 5 BASIC4.11□□□□□ -1.75
HDAC4P56524 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC4.11□□□□□ -1.75
HDAC4P56524 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC4.11□□□□□ -1.75
HDAC4P56524 AP001086.1-201ENST00000494882 321 ntBASIC4.11□□□□□ -1.75
HDAC4P56524 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC4.11□□□□□ -1.75
HDAC4P56524 AC109458.1-201ENST00000508858 316 ntBASIC4.11□□□□□ -1.75
HDAC4P56524 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC4.11□□□□□ -1.75
HDAC4P56524 FTH1P21-201ENST00000512179 511 ntBASIC4.11□□□□□ -1.75
HDAC4P56524 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC4.11□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 77.8 ms