Protein–RNA interactions for Protein: P53667

LIMK1, LIM domain kinase 1, humanhuman

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1P53667 AL365440.1-201ENST00000436135 2167 ntBASIC3.83□□□□□ -1.8
LIMK1P53667 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
LIMK1P53667 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
LIMK1P53667 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC3.83□□□□□ -1.8
LIMK1P53667 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC3.83□□□□□ -1.8
LIMK1P53667 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.83□□□□□ -1.8
LIMK1P53667 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
LIMK1P53667 SPATA31D2P-201ENST00000429999 4388 ntBASIC3.82□□□□□ -1.8
LIMK1P53667 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
LIMK1P53667 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
LIMK1P53667 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
LIMK1P53667 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC3.82□□□□□ -1.8
LIMK1P53667 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC3.82□□□□□ -1.8
LIMK1P53667 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
LIMK1P53667 Y_RNA.408-201ENST00000383987 102 ntBASIC3.82□□□□□ -1.8
LIMK1P53667 RNU6-339P-201ENST00000384310 107 ntBASIC3.82□□□□□ -1.8
LIMK1P53667 ARF4P3-201ENST00000397387 509 ntBASIC3.82□□□□□ -1.8
LIMK1P53667 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC3.82□□□□□ -1.8
LIMK1P53667 RNU6ATAC10P-201ENST00000408635 111 ntBASIC3.82□□□□□ -1.8
LIMK1P53667 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC3.82□□□□□ -1.8
LIMK1P53667 AC115115.1-201ENST00000449927 248 ntBASIC3.82□□□□□ -1.8
LIMK1P53667 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC3.82□□□□□ -1.8
LIMK1P53667 RAD23BP3-201ENST00000454157 1152 ntBASIC3.82□□□□□ -1.8
LIMK1P53667 NECAP1P2-201ENST00000455668 727 ntBASIC3.82□□□□□ -1.8
LIMK1P53667 RPS20P24-201ENST00000457473 361 ntBASIC3.82□□□□□ -1.8
LIMK1P53667 AC012181.1-201ENST00000479895 423 ntBASIC3.82□□□□□ -1.8
LIMK1P53667 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC3.82□□□□□ -1.8
LIMK1P53667 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC3.82□□□□□ -1.8
LIMK1P53667 BTF3L4P4-201ENST00000506381 449 ntBASIC3.82□□□□□ -1.8
LIMK1P53667 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC3.82□□□□□ -1.8
LIMK1P53667 SNORA31.20-201ENST00000517111 133 ntBASIC3.82□□□□□ -1.8
LIMK1P53667 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC3.82□□□□□ -1.8
LIMK1P53667 SLC2A13P1-201ENST00000531560 322 ntBASIC3.82□□□□□ -1.8
LIMK1P53667 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC3.82□□□□□ -1.8
LIMK1P53667 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC3.82□□□□□ -1.8
LIMK1P53667 MTND1P24-201ENST00000552175 861 ntBASIC3.82□□□□□ -1.8
LIMK1P53667 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC3.82□□□□□ -1.8
LIMK1P53667 AL163153.1-201ENST00000554223 283 ntBASIC3.82□□□□□ -1.8
LIMK1P53667 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC3.82□□□□□ -1.8
LIMK1P53667 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC3.82□□□□□ -1.8
LIMK1P53667 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC3.82□□□□□ -1.8
LIMK1P53667 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC3.82□□□□□ -1.8
LIMK1P53667 MRPS35P3-201ENST00000603189 709 ntBASIC3.82□□□□□ -1.8
LIMK1P53667 AC004987.4-201ENST00000603383 338 ntBASIC3.82□□□□□ -1.8
LIMK1P53667 AC124312.4-201ENST00000605533 310 ntBASIC3.82□□□□□ -1.8
LIMK1P53667 AC097478.2-201ENST00000610572 514 ntBASIC3.82□□□□□ -1.8
LIMK1P53667 MIR486-1-201ENST00000612171 68 ntBASIC3.82□□□□□ -1.8
LIMK1P53667 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC3.82□□□□□ -1.8
LIMK1P53667 AC107075.1-201ENST00000613695 314 ntBASIC3.82□□□□□ -1.8
LIMK1P53667 AC092650.2-201ENST00000619984 902 ntBASIC3.82□□□□□ -1.8
LIMK1P53667 AP002782.1-201ENST00000623107 614 ntBASIC3.82□□□□□ -1.8
LIMK1P53667 FAM26D-205ENST00000628083 1117 ntTSL 2 BASIC3.82□□□□□ -1.8
LIMK1P53667 TEX41-280ENST00000629185 591 ntTSL 5 BASIC3.82□□□□□ -1.8
LIMK1P53667 ABBA01000935.2-201ENST00000637477 838 ntBASIC3.82□□□□□ -1.8
LIMK1P53667 U6.101-201ENST00000637707 76 ntBASIC3.82□□□□□ -1.8
LIMK1P53667 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC3.82□□□□□ -1.8
LIMK1P53667 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
LIMK1P53667 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
LIMK1P53667 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
LIMK1P53667 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC3.82□□□□□ -1.8
LIMK1P53667 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC3.82□□□□□ -1.8
LIMK1P53667 AC005183.1-201ENST00000603687 1979 ntBASIC3.82□□□□□ -1.8
LIMK1P53667 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
LIMK1P53667 AL353746.1-201ENST00000566293 6881 ntBASIC3.81□□□□□ -1.8
LIMK1P53667 OSBPL9P4-201ENST00000371707 1800 ntBASIC3.81□□□□□ -1.8
LIMK1P53667 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
LIMK1P53667 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
LIMK1P53667 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.81□□□□□ -1.8
LIMK1P53667 AC021755.1-201ENST00000559747 1447 ntBASIC3.81□□□□□ -1.8
LIMK1P53667 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
LIMK1P53667 RPL7P26-201ENST00000333817 754 ntBASIC3.81□□□□□ -1.8
LIMK1P53667 SNRPEP3-201ENST00000338402 276 ntBASIC3.81□□□□□ -1.8
LIMK1P53667 Y_RNA.192-201ENST00000363977 102 ntBASIC3.81□□□□□ -1.8
LIMK1P53667 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC3.81□□□□□ -1.8
LIMK1P53667 MIR513B-201ENST00000385136 84 ntBASIC3.81□□□□□ -1.8
LIMK1P53667 RNU4-65P-201ENST00000410473 140 ntBASIC3.81□□□□□ -1.8
LIMK1P53667 ATP5A1P2-201ENST00000412323 255 ntBASIC3.81□□□□□ -1.8
LIMK1P53667 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC3.81□□□□□ -1.8
LIMK1P53667 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC3.81□□□□□ -1.8
LIMK1P53667 OFD1P12Y-201ENST00000427963 1207 ntBASIC3.81□□□□□ -1.8
LIMK1P53667 OFD1P13Y-201ENST00000431179 1232 ntBASIC3.81□□□□□ -1.8
LIMK1P53667 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC3.81□□□□□ -1.8
LIMK1P53667 RPL39P6-201ENST00000448289 150 ntBASIC3.81□□□□□ -1.8
LIMK1P53667 RPS3AP46-201ENST00000448352 682 ntBASIC3.81□□□□□ -1.8
LIMK1P53667 SNORD105B-201ENST00000458770 79 ntBASIC3.81□□□□□ -1.8
LIMK1P53667 AC108941.1-201ENST00000502853 530 ntBASIC3.81□□□□□ -1.8
LIMK1P53667 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC3.81□□□□□ -1.8
LIMK1P53667 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC3.81□□□□□ -1.8
LIMK1P53667 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC3.81□□□□□ -1.8
LIMK1P53667 RNA5SP164-201ENST00000516533 110 ntBASIC3.81□□□□□ -1.8
LIMK1P53667 RNU7-143P-201ENST00000516781 65 ntBASIC3.81□□□□□ -1.8
LIMK1P53667 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC3.81□□□□□ -1.8
LIMK1P53667 AP001636.2-201ENST00000525517 696 ntBASIC3.81□□□□□ -1.8
LIMK1P53667 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC3.81□□□□□ -1.8
LIMK1P53667 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC3.81□□□□□ -1.8
LIMK1P53667 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.81□□□□□ -1.8
LIMK1P53667 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC3.81□□□□□ -1.8
LIMK1P53667 NACA-211ENST00000548563 827 ntTSL 5 BASIC3.81□□□□□ -1.8
LIMK1P53667 AC125611.1-201ENST00000549563 229 ntBASIC3.81□□□□□ -1.8
LIMK1P53667 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC3.81□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 93.9 ms