Protein–RNA interactions for Protein: P50416

CPT1A, Carnitine O-palmitoyltransferase 1, liver isoform, humanhuman

Predictions only

Length 773 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1AP50416 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC4.52□□□□□ -1.69
CPT1AP50416 AL391156.1-201ENST00000554965 554 ntBASIC4.52□□□□□ -1.69
CPT1AP50416 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC4.52□□□□□ -1.69
CPT1AP50416 MIR3944-201ENST00000581277 108 ntBASIC4.52□□□□□ -1.69
CPT1AP50416 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC4.52□□□□□ -1.69
CPT1AP50416 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC4.52□□□□□ -1.69
CPT1AP50416 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC4.52□□□□□ -1.69
CPT1AP50416 BBIP1P1-201ENST00000602999 279 ntBASIC4.52□□□□□ -1.69
CPT1AP50416 RPL23AP92-201ENST00000603609 255 ntBASIC4.52□□□□□ -1.69
CPT1AP50416 AL451044.1-201ENST00000604867 238 ntBASIC4.52□□□□□ -1.69
CPT1AP50416 AL513477.2-201ENST00000607858 568 ntBASIC4.52□□□□□ -1.69
CPT1AP50416 AC027807.2-201ENST00000616099 408 ntBASIC4.52□□□□□ -1.69
CPT1AP50416 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC4.52□□□□□ -1.69
CPT1AP50416 AL356121.2-201ENST00000624715 780 ntBASIC4.52□□□□□ -1.69
CPT1AP50416 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC4.52□□□□□ -1.69
CPT1AP50416 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC4.52□□□□□ -1.69
CPT1AP50416 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
CPT1AP50416 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
CPT1AP50416 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
CPT1AP50416 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
CPT1AP50416 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC4.52□□□□□ -1.69
CPT1AP50416 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
CPT1AP50416 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
CPT1AP50416 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
CPT1AP50416 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC4.51□□□□□ -1.69
CPT1AP50416 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC4.51□□□□□ -1.69
CPT1AP50416 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
CPT1AP50416 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.51□□□□□ -1.69
CPT1AP50416 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
CPT1AP50416 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
CPT1AP50416 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
CPT1AP50416 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
CPT1AP50416 PNPT1P2-201ENST00000456768 2050 ntBASIC4.51□□□□□ -1.69
CPT1AP50416 SNORD35B-201ENST00000363660 87 ntBASIC4.51□□□□□ -1.69
CPT1AP50416 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC4.51□□□□□ -1.69
CPT1AP50416 SNORA75-201ENST00000384158 137 ntBASIC4.51□□□□□ -1.69
CPT1AP50416 RPL31P1-201ENST00000398116 372 ntBASIC4.51□□□□□ -1.69
CPT1AP50416 RNU2-16P-201ENST00000410712 136 ntBASIC4.51□□□□□ -1.69
CPT1AP50416 RNA5SP146-201ENST00000410743 123 ntBASIC4.51□□□□□ -1.69
CPT1AP50416 AC007899.1-201ENST00000412776 775 ntBASIC4.51□□□□□ -1.69
CPT1AP50416 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC4.51□□□□□ -1.69
CPT1AP50416 TBCAP1-201ENST00000436520 327 ntBASIC4.51□□□□□ -1.69
CPT1AP50416 RPS24P1-201ENST00000438550 371 ntBASIC4.51□□□□□ -1.69
CPT1AP50416 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC4.51□□□□□ -1.69
CPT1AP50416 HSPE1P28-201ENST00000443139 211 ntBASIC4.51□□□□□ -1.69
CPT1AP50416 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC4.51□□□□□ -1.69
CPT1AP50416 AC002381.1-201ENST00000447049 280 ntBASIC4.51□□□□□ -1.69
CPT1AP50416 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC4.51□□□□□ -1.69
CPT1AP50416 AC005297.2-201ENST00000450430 606 ntBASIC4.51□□□□□ -1.69
CPT1AP50416 RPS11P1-201ENST00000451072 473 ntBASIC4.51□□□□□ -1.69
CPT1AP50416 SSXP1-201ENST00000453640 473 ntBASIC4.51□□□□□ -1.69
CPT1AP50416 RAD23BP3-201ENST00000454157 1152 ntBASIC4.51□□□□□ -1.69
CPT1AP50416 ACTR3P3-201ENST00000480448 893 ntBASIC4.51□□□□□ -1.69
CPT1AP50416 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC4.51□□□□□ -1.69
CPT1AP50416 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC4.51□□□□□ -1.69
CPT1AP50416 DEFB109D-201ENST00000529497 240 ntBASIC4.51□□□□□ -1.69
CPT1AP50416 OR5AP1P-201ENST00000529730 940 ntBASIC4.51□□□□□ -1.69
CPT1AP50416 PTP4A1P6-201ENST00000531034 478 ntBASIC4.51□□□□□ -1.69
CPT1AP50416 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC4.51□□□□□ -1.69
CPT1AP50416 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC4.51□□□□□ -1.69
CPT1AP50416 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
CPT1AP50416 RPL23AP87-202ENST00000573039 466 ntBASIC4.51□□□□□ -1.69
CPT1AP50416 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC4.51□□□□□ -1.69
CPT1AP50416 AP001180.3-201ENST00000582221 145 ntBASIC4.51□□□□□ -1.69
CPT1AP50416 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC4.51□□□□□ -1.69
CPT1AP50416 AC067852.4-201ENST00000590314 478 ntBASIC4.51□□□□□ -1.69
CPT1AP50416 AC079089.3-201ENST00000603094 673 ntBASIC4.51□□□□□ -1.69
CPT1AP50416 AC025588.3-201ENST00000604182 274 ntBASIC4.51□□□□□ -1.69
CPT1AP50416 ACTR3BP1-201ENST00000605584 1247 ntBASIC4.51□□□□□ -1.69
CPT1AP50416 SNORA51-201ENST00000606420 132 ntBASIC4.51□□□□□ -1.69
CPT1AP50416 AL121772.2-201ENST00000614331 297 ntBASIC4.51□□□□□ -1.69
CPT1AP50416 AL357080.1-201ENST00000617394 239 ntBASIC4.51□□□□□ -1.69
CPT1AP50416 AC093591.3-201ENST00000634516 308 ntBASIC4.51□□□□□ -1.69
CPT1AP50416 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
CPT1AP50416 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
CPT1AP50416 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC4.51□□□□□ -1.69
CPT1AP50416 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC4.51□□□□□ -1.69
CPT1AP50416 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
CPT1AP50416 AC090229.1-201ENST00000590983 1609 ntBASIC4.5□□□□□ -1.69
CPT1AP50416 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
CPT1AP50416 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
CPT1AP50416 AC018529.3-201ENST00000624212 2254 ntBASIC4.5□□□□□ -1.69
CPT1AP50416 SNORD82-201ENST00000365530 70 ntBASIC4.5□□□□□ -1.69
CPT1AP50416 NFIB-202ENST00000380924 840 ntTSL 5 BASIC4.5□□□□□ -1.69
CPT1AP50416 RNU6-192P-201ENST00000391253 100 ntBASIC4.5□□□□□ -1.69
CPT1AP50416 SLC9B1P2-201ENST00000398120 1184 ntBASIC4.5□□□□□ -1.69
CPT1AP50416 MIR1305-201ENST00000408300 86 ntBASIC4.5□□□□□ -1.69
CPT1AP50416 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
CPT1AP50416 RN7SKP156-201ENST00000410308 342 ntBASIC4.5□□□□□ -1.69
CPT1AP50416 RPS23P10-201ENST00000416185 486 ntBASIC4.5□□□□□ -1.69
CPT1AP50416 AC069157.1-201ENST00000421749 137 ntBASIC4.5□□□□□ -1.69
CPT1AP50416 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC4.5□□□□□ -1.69
CPT1AP50416 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC4.5□□□□□ -1.69
CPT1AP50416 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC4.5□□□□□ -1.69
CPT1AP50416 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC4.5□□□□□ -1.69
CPT1AP50416 RPL37P6-202ENST00000464216 403 ntBASIC4.5□□□□□ -1.69
CPT1AP50416 RN7SL323P-201ENST00000494712 295 ntBASIC4.5□□□□□ -1.69
CPT1AP50416 ARL2BPP4-201ENST00000506854 471 ntBASIC4.5□□□□□ -1.69
CPT1AP50416 AC022447.3-201ENST00000506865 495 ntBASIC4.5□□□□□ -1.69
CPT1AP50416 AC021146.3-201ENST00000511911 260 ntBASIC4.5□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 76.7 ms