Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 AL133393.1-201ENST00000603277 287 ntBASIC2.87□□□□□ -1.95
CX3CR1P49238 AC106900.2-201ENST00000604994 317 ntBASIC2.87□□□□□ -1.95
CX3CR1P49238 U3.45-201ENST00000607547 219 ntBASIC2.87□□□□□ -1.95
CX3CR1P49238 AC068880.4-201ENST00000623082 495 ntBASIC2.87□□□□□ -1.95
CX3CR1P49238 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC2.87□□□□□ -1.95
CX3CR1P49238 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC2.87□□□□□ -1.95
CX3CR1P49238 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
CX3CR1P49238 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC2.87□□□□□ -1.95
CX3CR1P49238 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC2.87□□□□□ -1.95
CX3CR1P49238 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
CX3CR1P49238 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC2.86□□□□□ -1.95
CX3CR1P49238 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
CX3CR1P49238 DBF4P1-201ENST00000412976 1892 ntBASIC2.86□□□□□ -1.95
CX3CR1P49238 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC2.86□□□□□ -1.95
CX3CR1P49238 Y_RNA.126-201ENST00000363382 111 ntBASIC2.86□□□□□ -1.95
CX3CR1P49238 RNA5SP50-201ENST00000363731 107 ntBASIC2.86□□□□□ -1.95
CX3CR1P49238 NFIB-202ENST00000380924 840 ntTSL 5 BASIC2.86□□□□□ -1.95
CX3CR1P49238 RPL21P3-201ENST00000395517 478 ntBASIC2.86□□□□□ -1.95
CX3CR1P49238 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC2.86□□□□□ -1.95
CX3CR1P49238 RPL32P35-201ENST00000415214 394 ntBASIC2.86□□□□□ -1.95
CX3CR1P49238 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC2.86□□□□□ -1.95
CX3CR1P49238 BOLA3P4-201ENST00000418151 400 ntBASIC2.86□□□□□ -1.95
CX3CR1P49238 ATP6V0E1P4-201ENST00000427294 242 ntBASIC2.86□□□□□ -1.95
CX3CR1P49238 RPL21P40-201ENST00000428586 483 ntBASIC2.86□□□□□ -1.95
CX3CR1P49238 AC091286.1-201ENST00000431233 461 ntBASIC2.86□□□□□ -1.95
CX3CR1P49238 HMGN2P31-201ENST00000432430 273 ntBASIC2.86□□□□□ -1.95
CX3CR1P49238 MTCYBP34-201ENST00000439552 670 ntBASIC2.86□□□□□ -1.95
CX3CR1P49238 AC000041.1-201ENST00000439655 175 ntBASIC2.86□□□□□ -1.95
CX3CR1P49238 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC2.86□□□□□ -1.95
CX3CR1P49238 SEPT14P24-201ENST00000447236 180 ntBASIC2.86□□□□□ -1.95
CX3CR1P49238 AC140076.1-201ENST00000449897 361 ntBASIC2.86□□□□□ -1.95
CX3CR1P49238 snoU109.4-201ENST00000458953 143 ntBASIC2.86□□□□□ -1.95
CX3CR1P49238 AC146507.2-201ENST00000460608 476 ntBASIC2.86□□□□□ -1.95
CX3CR1P49238 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC2.86□□□□□ -1.95
CX3CR1P49238 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC2.86□□□□□ -1.95
CX3CR1P49238 AC093278.1-201ENST00000494700 600 ntBASIC2.86□□□□□ -1.95
CX3CR1P49238 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC2.86□□□□□ -1.95
CX3CR1P49238 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC2.86□□□□□ -1.95
CX3CR1P49238 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC2.86□□□□□ -1.95
CX3CR1P49238 NAMPTP2-201ENST00000505629 1115 ntBASIC2.86□□□□□ -1.95
CX3CR1P49238 AC006390.1-201ENST00000508068 283 ntBASIC2.86□□□□□ -1.95
CX3CR1P49238 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC2.86□□□□□ -1.95
CX3CR1P49238 AC026412.2-201ENST00000512270 1075 ntBASIC2.86□□□□□ -1.95
CX3CR1P49238 SNORD59.2-201ENST00000516873 68 ntBASIC2.86□□□□□ -1.95
CX3CR1P49238 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC2.86□□□□□ -1.95
CX3CR1P49238 MTND1P36-201ENST00000522384 936 ntBASIC2.86□□□□□ -1.95
CX3CR1P49238 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC2.86□□□□□ -1.95
CX3CR1P49238 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC2.86□□□□□ -1.95
CX3CR1P49238 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC2.86□□□□□ -1.95
CX3CR1P49238 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC2.86□□□□□ -1.95
CX3CR1P49238 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC2.86□□□□□ -1.95
CX3CR1P49238 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC2.86□□□□□ -1.95
CX3CR1P49238 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC2.86□□□□□ -1.95
CX3CR1P49238 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC2.86□□□□□ -1.95
CX3CR1P49238 MIR5186-201ENST00000577504 120 ntBASIC2.86□□□□□ -1.95
CX3CR1P49238 AC053481.3-201ENST00000577881 843 ntBASIC2.86□□□□□ -1.95
CX3CR1P49238 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC2.86□□□□□ -1.95
CX3CR1P49238 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC2.86□□□□□ -1.95
CX3CR1P49238 AL159169.3-201ENST00000608871 561 ntBASIC2.86□□□□□ -1.95
CX3CR1P49238 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC2.86□□□□□ -1.95
CX3CR1P49238 AL157817.1-201ENST00000614264 790 ntBASIC2.86□□□□□ -1.95
CX3CR1P49238 AC002076.2-201ENST00000617362 122 ntBASIC2.86□□□□□ -1.95
CX3CR1P49238 AC078880.5-201ENST00000617845 421 ntBASIC2.86□□□□□ -1.95
CX3CR1P49238 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC2.86□□□□□ -1.95
CX3CR1P49238 VN1R7P-201ENST00000619242 903 ntBASIC2.86□□□□□ -1.95
CX3CR1P49238 MFSD8-245ENST00000641743 948 ntBASIC2.86□□□□□ -1.95
CX3CR1P49238 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC2.86□□□□□ -1.95
CX3CR1P49238 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
CX3CR1P49238 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC2.85□□□□□ -1.95
CX3CR1P49238 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
CX3CR1P49238 OR8K5-201ENST00000313447 924 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
CX3CR1P49238 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
CX3CR1P49238 U3.42-201ENST00000408746 214 ntBASIC2.85□□□□□ -1.95
CX3CR1P49238 RNA5SP229-201ENST00000410809 99 ntBASIC2.85□□□□□ -1.95
CX3CR1P49238 AC092638.1-201ENST00000411966 1275 ntBASIC2.85□□□□□ -1.95
CX3CR1P49238 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC2.85□□□□□ -1.95
CX3CR1P49238 RPL21P32-201ENST00000419877 477 ntBASIC2.85□□□□□ -1.95
CX3CR1P49238 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC2.85□□□□□ -1.95
CX3CR1P49238 MTCO1P39-201ENST00000426148 480 ntBASIC2.85□□□□□ -1.95
CX3CR1P49238 MTATP6P4-201ENST00000427725 675 ntBASIC2.85□□□□□ -1.95
CX3CR1P49238 OR2AS1P-201ENST00000427827 319 ntBASIC2.85□□□□□ -1.95
CX3CR1P49238 MTCYBP32-201ENST00000427945 1084 ntBASIC2.85□□□□□ -1.95
CX3CR1P49238 GOT2P5-201ENST00000433995 546 ntBASIC2.85□□□□□ -1.95
CX3CR1P49238 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC2.85□□□□□ -1.95
CX3CR1P49238 ATP5C1P1-201ENST00000441945 895 ntBASIC2.85□□□□□ -1.95
CX3CR1P49238 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC2.85□□□□□ -1.95
CX3CR1P49238 MTCO1P48-201ENST00000448024 1096 ntBASIC2.85□□□□□ -1.95
CX3CR1P49238 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC2.85□□□□□ -1.95
CX3CR1P49238 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC2.85□□□□□ -1.95
CX3CR1P49238 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
CX3CR1P49238 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC2.85□□□□□ -1.95
CX3CR1P49238 AC092902.1-201ENST00000486999 259 ntBASIC2.85□□□□□ -1.95
CX3CR1P49238 AC093663.1-201ENST00000497190 394 ntBASIC2.85□□□□□ -1.95
CX3CR1P49238 CBX3P3-201ENST00000508108 532 ntBASIC2.85□□□□□ -1.95
CX3CR1P49238 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC2.85□□□□□ -1.95
CX3CR1P49238 SCARNA20.6-201ENST00000517251 106 ntBASIC2.85□□□□□ -1.95
CX3CR1P49238 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC2.85□□□□□ -1.95
CX3CR1P49238 AC079362.1-201ENST00000546865 525 ntTSL 3 BASIC2.85□□□□□ -1.95
CX3CR1P49238 AC090502.2-201ENST00000549267 280 ntBASIC2.85□□□□□ -1.95
CX3CR1P49238 OR4T1P-201ENST00000554933 911 ntBASIC2.85□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 88.6 ms