Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
SOX2P48431 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC3.91□□□□□ -1.78
SOX2P48431 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC3.91□□□□□ -1.78
SOX2P48431 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
SOX2P48431 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC3.9□□□□□ -1.78
SOX2P48431 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
SOX2P48431 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC3.9□□□□□ -1.78
SOX2P48431 ZNF137P-201ENST00000456718 1920 ntBASIC3.9□□□□□ -1.78
SOX2P48431 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
SOX2P48431 OR4K15-201ENST00000305051 1216 ntBASIC3.9□□□□□ -1.79
SOX2P48431 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
SOX2P48431 SNORA51.1-201ENST00000363243 140 ntBASIC3.9□□□□□ -1.79
SOX2P48431 Y_RNA.372-201ENST00000365599 102 ntBASIC3.9□□□□□ -1.79
SOX2P48431 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC3.9□□□□□ -1.79
SOX2P48431 SNORD51-201ENST00000384320 80 ntBASIC3.9□□□□□ -1.79
SOX2P48431 CCNG1P1-201ENST00000406783 885 ntBASIC3.9□□□□□ -1.79
SOX2P48431 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC3.9□□□□□ -1.79
SOX2P48431 RPS20P14-201ENST00000412545 360 ntBASIC3.9□□□□□ -1.79
SOX2P48431 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC3.9□□□□□ -1.79
SOX2P48431 ERI3-IT1-201ENST00000414156 619 ntTSL 3 BASIC3.9□□□□□ -1.79
SOX2P48431 MTND3P17-201ENST00000416968 344 ntBASIC3.9□□□□□ -1.79
SOX2P48431 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC3.9□□□□□ -1.79
SOX2P48431 AC069157.1-201ENST00000421749 137 ntBASIC3.9□□□□□ -1.79
SOX2P48431 AC133104.1-201ENST00000429100 218 ntBASIC3.9□□□□□ -1.79
SOX2P48431 MTND1P2-201ENST00000430604 821 ntBASIC3.9□□□□□ -1.79
SOX2P48431 LYPLA1P1-201ENST00000434514 622 ntBASIC3.9□□□□□ -1.79
SOX2P48431 AC104850.1-201ENST00000435940 476 ntBASIC3.9□□□□□ -1.79
SOX2P48431 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC3.9□□□□□ -1.79
SOX2P48431 AC016831.4-201ENST00000438302 307 ntBASIC3.9□□□□□ -1.79
SOX2P48431 MTATP6P23-201ENST00000440153 476 ntBASIC3.9□□□□□ -1.79
SOX2P48431 RPL23AP93-201ENST00000440847 484 ntBASIC3.9□□□□□ -1.79
SOX2P48431 AC011753.3-201ENST00000443436 406 ntBASIC3.9□□□□□ -1.79
SOX2P48431 AL353691.1-201ENST00000451332 387 ntBASIC3.9□□□□□ -1.79
SOX2P48431 AC012671.1-201ENST00000451912 203 ntBASIC3.9□□□□□ -1.79
SOX2P48431 FGF7P3-201ENST00000454645 303 ntBASIC3.9□□□□□ -1.79
SOX2P48431 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC3.9□□□□□ -1.79
SOX2P48431 AC063943.1-201ENST00000465434 453 ntBASIC3.9□□□□□ -1.79
SOX2P48431 AC007182.2-201ENST00000489251 402 ntBASIC3.9□□□□□ -1.79
SOX2P48431 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC3.9□□□□□ -1.79
SOX2P48431 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC3.9□□□□□ -1.79
SOX2P48431 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC3.9□□□□□ -1.79
SOX2P48431 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC3.9□□□□□ -1.79
SOX2P48431 AC006499.3-201ENST00000506077 748 ntBASIC3.9□□□□□ -1.79
SOX2P48431 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC3.9□□□□□ -1.79
SOX2P48431 AC015795.1-201ENST00000513669 327 ntBASIC3.9□□□□□ -1.79
SOX2P48431 CARD16-203ENST00000525374 503 ntTSL 3 BASIC3.9□□□□□ -1.79
SOX2P48431 FAM92A1P1-201ENST00000528023 890 ntBASIC3.9□□□□□ -1.79
SOX2P48431 TEX49-202ENST00000548380 573 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
SOX2P48431 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC3.9□□□□□ -1.79
SOX2P48431 RPS3AP4-201ENST00000555161 764 ntBASIC3.9□□□□□ -1.79
SOX2P48431 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC3.9□□□□□ -1.79
SOX2P48431 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC3.9□□□□□ -1.79
SOX2P48431 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC3.9□□□□□ -1.79
SOX2P48431 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC3.9□□□□□ -1.79
SOX2P48431 AC060771.1-201ENST00000582031 164 ntBASIC3.9□□□□□ -1.79
SOX2P48431 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC3.9□□□□□ -1.79
SOX2P48431 AC068790.3-201ENST00000602988 553 ntBASIC3.9□□□□□ -1.79
SOX2P48431 AL451044.1-201ENST00000604867 238 ntBASIC3.9□□□□□ -1.79
SOX2P48431 AC055876.5-201ENST00000605667 259 ntBASIC3.9□□□□□ -1.79
SOX2P48431 MIR98-201ENST00000606724 119 ntBASIC3.9□□□□□ -1.79
SOX2P48431 AL355472.4-201ENST00000610233 626 ntBASIC3.9□□□□□ -1.79
SOX2P48431 AC006329.2-201ENST00000611491 394 ntBASIC3.9□□□□□ -1.79
SOX2P48431 AC007014.2-201ENST00000615581 479 ntBASIC3.9□□□□□ -1.79
SOX2P48431 MIR6826-201ENST00000617808 98 ntBASIC3.9□□□□□ -1.79
SOX2P48431 U6.42-201ENST00000618440 107 ntBASIC3.9□□□□□ -1.79
SOX2P48431 MIR6853-201ENST00000619642 74 ntBASIC3.9□□□□□ -1.79
SOX2P48431 CGA-206ENST00000630630 832 ntTSL 2 BASIC3.9□□□□□ -1.79
SOX2P48431 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
SOX2P48431 AC016588.2-201ENST00000632484 3021 ntBASIC3.9□□□□□ -1.79
SOX2P48431 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC3.9□□□□□ -1.79
SOX2P48431 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC3.9□□□□□ -1.79
SOX2P48431 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
SOX2P48431 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC3.9□□□□□ -1.79
SOX2P48431 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC3.89□□□□□ -1.79
SOX2P48431 AC009902.3-201ENST00000606235 2172 ntBASIC3.89□□□□□ -1.79
SOX2P48431 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
SOX2P48431 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
SOX2P48431 AC021146.4-201ENST00000309229 279 ntBASIC3.89□□□□□ -1.79
SOX2P48431 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC3.89□□□□□ -1.79
SOX2P48431 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
SOX2P48431 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
SOX2P48431 Y_RNA.1-201ENST00000352915 104 ntBASIC3.89□□□□□ -1.79
SOX2P48431 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
SOX2P48431 RNA5SP307-201ENST00000362863 116 ntBASIC3.89□□□□□ -1.79
SOX2P48431 RN7SKP269-201ENST00000365545 319 ntBASIC3.89□□□□□ -1.79
SOX2P48431 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC3.89□□□□□ -1.79
SOX2P48431 RNU6-761P-201ENST00000384148 107 ntBASIC3.89□□□□□ -1.79
SOX2P48431 RNU6-1103P-201ENST00000384150 107 ntBASIC3.89□□□□□ -1.79
SOX2P48431 SNORA70E-201ENST00000384492 135 ntBASIC3.89□□□□□ -1.79
SOX2P48431 MIR513A2-201ENST00000385249 127 ntBASIC3.89□□□□□ -1.79
SOX2P48431 IL6-206ENST00000407492 926 ntTSL 3 BASIC3.89□□□□□ -1.79
SOX2P48431 RN7SKP213-201ENST00000410746 298 ntBASIC3.89□□□□□ -1.79
SOX2P48431 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC3.89□□□□□ -1.79
SOX2P48431 RPS23P10-201ENST00000416185 486 ntBASIC3.89□□□□□ -1.79
SOX2P48431 TEX41-204ENST00000423031 491 ntTSL 4 BASIC3.89□□□□□ -1.79
SOX2P48431 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC3.89□□□□□ -1.79
SOX2P48431 AC119618.1-201ENST00000434191 222 ntBASIC3.89□□□□□ -1.79
SOX2P48431 AC002486.1-201ENST00000435098 391 ntBASIC3.89□□□□□ -1.79
SOX2P48431 USP9YP15-201ENST00000442391 422 ntBASIC3.89□□□□□ -1.79
SOX2P48431 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC3.89□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 111.6 ms