Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
SSR1P43307 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
SSR1P43307 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
SSR1P43307 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC3.38□□□□□ -1.87
SSR1P43307 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
SSR1P43307 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
SSR1P43307 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
SSR1P43307 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
SSR1P43307 MT-TC-201ENST00000387405 66 ntBASIC3.38□□□□□ -1.87
SSR1P43307 GSTA8P-201ENST00000404253 637 ntBASIC3.38□□□□□ -1.87
SSR1P43307 AC063979.1-201ENST00000415539 377 ntBASIC3.38□□□□□ -1.87
SSR1P43307 UBE2D3P2-201ENST00000424409 445 ntBASIC3.38□□□□□ -1.87
SSR1P43307 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC3.38□□□□□ -1.87
SSR1P43307 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC3.38□□□□□ -1.87
SSR1P43307 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC3.38□□□□□ -1.87
SSR1P43307 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC3.38□□□□□ -1.87
SSR1P43307 ATP5C1P1-201ENST00000441945 895 ntBASIC3.38□□□□□ -1.87
SSR1P43307 HSFY3P-201ENST00000444242 1191 ntBASIC3.38□□□□□ -1.87
SSR1P43307 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC3.38□□□□□ -1.87
SSR1P43307 RNU7-140P-201ENST00000459546 60 ntBASIC3.38□□□□□ -1.87
SSR1P43307 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC3.38□□□□□ -1.87
SSR1P43307 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC3.38□□□□□ -1.87
SSR1P43307 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC3.38□□□□□ -1.87
SSR1P43307 RN7SKP157-201ENST00000516174 282 ntBASIC3.38□□□□□ -1.87
SSR1P43307 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC3.38□□□□□ -1.87
SSR1P43307 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC3.38□□□□□ -1.87
SSR1P43307 NCAPGP2-201ENST00000557911 754 ntBASIC3.38□□□□□ -1.87
SSR1P43307 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC3.38□□□□□ -1.87
SSR1P43307 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC3.38□□□□□ -1.87
SSR1P43307 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC3.38□□□□□ -1.87
SSR1P43307 MIR4789-201ENST00000577469 82 ntBASIC3.38□□□□□ -1.87
SSR1P43307 VN1R88P-201ENST00000596787 292 ntBASIC3.38□□□□□ -1.87
SSR1P43307 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC3.38□□□□□ -1.87
SSR1P43307 AC018755.4-201ENST00000619715 454 ntBASIC3.38□□□□□ -1.87
SSR1P43307 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.38□□□□□ -1.87
SSR1P43307 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC3.38□□□□□ -1.87
SSR1P43307 AC073476.4-201ENST00000628409 72 ntBASIC3.38□□□□□ -1.87
SSR1P43307 AC091948.2-201ENST00000636510 279 ntBASIC3.38□□□□□ -1.87
SSR1P43307 AL590396.4-201ENST00000636779 956 ntBASIC3.38□□□□□ -1.87
SSR1P43307 MTCO1P12-201ENST00000414273 1543 ntBASIC3.38□□□□□ -1.87
SSR1P43307 AC108206.1-201ENST00000570186 4159 ntBASIC3.38□□□□□ -1.87
SSR1P43307 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
SSR1P43307 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.38□□□□□ -1.87
SSR1P43307 SAGE4P-201ENST00000442271 3381 ntBASIC3.37□□□□□ -1.87
SSR1P43307 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC3.37□□□□□ -1.87
SSR1P43307 NACA3P-201ENST00000359690 648 ntBASIC3.37□□□□□ -1.87
SSR1P43307 SSXP10-201ENST00000402595 565 ntBASIC3.37□□□□□ -1.87
SSR1P43307 SFR1P1-201ENST00000403720 688 ntBASIC3.37□□□□□ -1.87
SSR1P43307 UBE2V1P9-201ENST00000414760 368 ntBASIC3.37□□□□□ -1.87
SSR1P43307 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
SSR1P43307 AL606495.1-201ENST00000422100 813 ntBASIC3.37□□□□□ -1.87
SSR1P43307 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC3.37□□□□□ -1.87
SSR1P43307 LSM1P1-201ENST00000438629 273 ntBASIC3.37□□□□□ -1.87
SSR1P43307 RN7SL293P-201ENST00000481765 281 ntBASIC3.37□□□□□ -1.87
SSR1P43307 AC093278.1-201ENST00000494700 600 ntBASIC3.37□□□□□ -1.87
SSR1P43307 RNU1-143P-201ENST00000516296 146 ntBASIC3.37□□□□□ -1.87
SSR1P43307 SCARNA20.6-201ENST00000517251 106 ntBASIC3.37□□□□□ -1.87
SSR1P43307 PTK2-220ENST00000520151 573 ntTSL 4 BASIC3.37□□□□□ -1.87
SSR1P43307 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC3.37□□□□□ -1.87
SSR1P43307 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC3.37□□□□□ -1.87
SSR1P43307 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC3.37□□□□□ -1.87
SSR1P43307 MTCO1P40-201ENST00000574371 625 ntBASIC3.37□□□□□ -1.87
SSR1P43307 AC133794.1-201ENST00000602731 914 ntBASIC3.37□□□□□ -1.87
SSR1P43307 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC3.37□□□□□ -1.87
SSR1P43307 U1.23-201ENST00000610293 146 ntBASIC3.37□□□□□ -1.87
SSR1P43307 RNU1-68P-201ENST00000615382 146 ntBASIC3.37□□□□□ -1.87
SSR1P43307 AC090116.1-201ENST00000615679 446 ntBASIC3.37□□□□□ -1.87
SSR1P43307 U1.39-201ENST00000621562 146 ntBASIC3.37□□□□□ -1.87
SSR1P43307 AC034229.5-201ENST00000624258 185 ntBASIC3.37□□□□□ -1.87
SSR1P43307 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC3.37□□□□□ -1.87
SSR1P43307 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC3.37□□□□□ -1.87
SSR1P43307 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
SSR1P43307 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC3.37□□□□□ -1.87
SSR1P43307 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.37□□□□□ -1.87
SSR1P43307 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.36□□□□□ -1.87
SSR1P43307 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
SSR1P43307 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC3.36□□□□□ -1.87
SSR1P43307 AL672167.1-206ENST00000356293 943 ntBASIC3.36□□□□□ -1.87
SSR1P43307 RNA5SP119-201ENST00000362715 117 ntBASIC3.36□□□□□ -1.87
SSR1P43307 RNU6-1180P-201ENST00000364935 107 ntBASIC3.36□□□□□ -1.87
SSR1P43307 OR6K3-202ENST00000368146 996 ntBASIC3.36□□□□□ -1.87
SSR1P43307 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC3.36□□□□□ -1.87
SSR1P43307 RNU6-921P-201ENST00000384361 107 ntBASIC3.36□□□□□ -1.87
SSR1P43307 RNU6-837P-201ENST00000391056 108 ntBASIC3.36□□□□□ -1.87
SSR1P43307 AL356057.2-201ENST00000403318 432 ntBASIC3.36□□□□□ -1.87
SSR1P43307 RNA5SP229-201ENST00000410809 99 ntBASIC3.36□□□□□ -1.87
SSR1P43307 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC3.36□□□□□ -1.87
SSR1P43307 BX664727.1-201ENST00000416024 466 ntBASIC3.36□□□□□ -1.87
SSR1P43307 AL034347.1-201ENST00000420766 835 ntTSL 3 BASIC3.36□□□□□ -1.87
SSR1P43307 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC3.36□□□□□ -1.87
SSR1P43307 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC3.36□□□□□ -1.87
SSR1P43307 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC3.36□□□□□ -1.87
SSR1P43307 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC3.36□□□□□ -1.87
SSR1P43307 AL357507.1-201ENST00000435946 669 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
SSR1P43307 Z95327.1-201ENST00000446082 482 ntBASIC3.36□□□□□ -1.87
SSR1P43307 GTF2IP12-201ENST00000456547 356 ntBASIC3.36□□□□□ -1.87
SSR1P43307 SNORA84-201ENST00000459229 133 ntBASIC3.36□□□□□ -1.87
SSR1P43307 AC008571.1-201ENST00000467232 300 ntBASIC3.36□□□□□ -1.87
SSR1P43307 AP001025.2-201ENST00000490908 477 ntBASIC3.36□□□□□ -1.87
SSR1P43307 AC006499.5-201ENST00000505037 514 ntBASIC3.36□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 105.6 ms