Protein–RNA interactions for Protein: P43088

PTGFR, Prostaglandin F2-alpha receptor, humanhuman

Predictions only

Length 359 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTGFRP43088 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
PTGFRP43088 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
PTGFRP43088 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
PTGFRP43088 PWAR6-201ENST00000552334 4618 ntBASIC3.12□□□□□ -1.91
PTGFRP43088 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC3.12□□□□□ -1.91
PTGFRP43088 AC021755.1-201ENST00000559747 1447 ntBASIC3.12□□□□□ -1.91
PTGFRP43088 AC090740.1-201ENST00000623193 2262 ntBASIC3.12□□□□□ -1.91
PTGFRP43088 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.12□□□□□ -1.91
PTGFRP43088 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.12□□□□□ -1.91
PTGFRP43088 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.12□□□□□ -1.91
PTGFRP43088 RNU6-882P-201ENST00000391025 103 ntBASIC3.12□□□□□ -1.91
PTGFRP43088 HMGB1P17-201ENST00000403495 628 ntBASIC3.12□□□□□ -1.91
PTGFRP43088 AL136116.1-201ENST00000403591 381 ntBASIC3.12□□□□□ -1.91
PTGFRP43088 BEND7P1-201ENST00000422058 457 ntBASIC3.12□□□□□ -1.91
PTGFRP43088 AC233728.2-201ENST00000425348 757 ntBASIC3.12□□□□□ -1.91
PTGFRP43088 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
PTGFRP43088 RPL7P2-201ENST00000427639 268 ntBASIC3.12□□□□□ -1.91
PTGFRP43088 HSPE1P28-201ENST00000443139 211 ntBASIC3.12□□□□□ -1.91
PTGFRP43088 MTCO2P25-201ENST00000447065 681 ntBASIC3.12□□□□□ -1.91
PTGFRP43088 MTATP6P14-201ENST00000455189 673 ntBASIC3.12□□□□□ -1.91
PTGFRP43088 UBDP1-202ENST00000457888 382 ntBASIC3.12□□□□□ -1.91
PTGFRP43088 ACTG1P13-201ENST00000486987 1043 ntBASIC3.12□□□□□ -1.91
PTGFRP43088 AC010265.1-201ENST00000513509 211 ntBASIC3.12□□□□□ -1.91
PTGFRP43088 RNU6-352P-201ENST00000516908 107 ntBASIC3.12□□□□□ -1.91
PTGFRP43088 AC022861.1-201ENST00000522981 663 ntBASIC3.12□□□□□ -1.91
PTGFRP43088 AP001804.3-201ENST00000525146 880 ntBASIC3.12□□□□□ -1.91
PTGFRP43088 AC022690.1-201ENST00000526681 550 ntBASIC3.12□□□□□ -1.91
PTGFRP43088 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
PTGFRP43088 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC3.12□□□□□ -1.91
PTGFRP43088 AL132657.2-201ENST00000564417 358 ntBASIC3.12□□□□□ -1.91
PTGFRP43088 GOLGA8M-203ENST00000568033 557 ntTSL 4 BASIC3.12□□□□□ -1.91
PTGFRP43088 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC3.12□□□□□ -1.91
PTGFRP43088 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC3.12□□□□□ -1.91
PTGFRP43088 AC068831.7-201ENST00000616954 363 ntBASIC3.12□□□□□ -1.91
PTGFRP43088 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.12□□□□□ -1.91
PTGFRP43088 FP236240.3-201ENST00000623061 327 ntBASIC3.12□□□□□ -1.91
PTGFRP43088 RNA5SP196-201ENST00000625967 102 ntBASIC3.12□□□□□ -1.91
PTGFRP43088 TEX41-280ENST00000629185 591 ntTSL 5 BASIC3.12□□□□□ -1.91
PTGFRP43088 AL513185.3-201ENST00000433335 1300 ntBASIC3.12□□□□□ -1.91
PTGFRP43088 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
PTGFRP43088 TAB3P1-202ENST00000452645 1634 ntBASIC3.11□□□□□ -1.91
PTGFRP43088 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
PTGFRP43088 AL356473.1-201ENST00000406203 1408 ntBASIC3.11□□□□□ -1.91
PTGFRP43088 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
PTGFRP43088 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC3.11□□□□□ -1.91
PTGFRP43088 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
PTGFRP43088 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC3.11□□□□□ -1.91
PTGFRP43088 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
PTGFRP43088 AL079305.1-201ENST00000623159 3008 ntBASIC3.11□□□□□ -1.91
PTGFRP43088 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.11□□□□□ -1.91
PTGFRP43088 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
PTGFRP43088 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
PTGFRP43088 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
PTGFRP43088 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
PTGFRP43088 SNORD116-12-201ENST00000384468 92 ntBASIC3.11□□□□□ -1.91
PTGFRP43088 MIR620-201ENST00000385232 95 ntBASIC3.11□□□□□ -1.91
PTGFRP43088 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC3.11□□□□□ -1.91
PTGFRP43088 AL590084.1-201ENST00000407885 387 ntBASIC3.11□□□□□ -1.91
PTGFRP43088 RN7SKP263-201ENST00000411194 309 ntBASIC3.11□□□□□ -1.91
PTGFRP43088 AC068533.2-201ENST00000411872 306 ntBASIC3.11□□□□□ -1.91
PTGFRP43088 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC3.11□□□□□ -1.91
PTGFRP43088 TEX41-203ENST00000420472 765 ntTSL 3 BASIC3.11□□□□□ -1.91
PTGFRP43088 AL591419.1-201ENST00000427423 339 ntBASIC3.11□□□□□ -1.91
PTGFRP43088 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC3.11□□□□□ -1.91
PTGFRP43088 AL158071.1-201ENST00000430315 461 ntBASIC3.11□□□□□ -1.91
PTGFRP43088 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC3.11□□□□□ -1.91
PTGFRP43088 HIGD1AP11-201ENST00000438361 280 ntBASIC3.11□□□□□ -1.91
PTGFRP43088 AL353691.1-201ENST00000451332 387 ntBASIC3.11□□□□□ -1.91
PTGFRP43088 NUTF2P7-201ENST00000453086 375 ntBASIC3.11□□□□□ -1.91
PTGFRP43088 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
PTGFRP43088 FCF1P6-201ENST00000456841 595 ntBASIC3.11□□□□□ -1.91
PTGFRP43088 ARPC3P2-201ENST00000457786 533 ntBASIC3.11□□□□□ -1.91
PTGFRP43088 AC010401.1-201ENST00000463867 348 ntBASIC3.11□□□□□ -1.91
PTGFRP43088 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC3.11□□□□□ -1.91
PTGFRP43088 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC3.11□□□□□ -1.91
PTGFRP43088 RNU6-583P-201ENST00000516012 92 ntBASIC3.11□□□□□ -1.91
PTGFRP43088 RNU6-579P-201ENST00000516879 102 ntBASIC3.11□□□□□ -1.91
PTGFRP43088 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
PTGFRP43088 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC3.11□□□□□ -1.91
PTGFRP43088 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.11□□□□□ -1.91
PTGFRP43088 AC023161.2-201ENST00000551218 780 ntBASIC3.11□□□□□ -1.91
PTGFRP43088 TRAV37-201ENST00000553906 342 ntBASIC3.11□□□□□ -1.91
PTGFRP43088 BNIP3P5-201ENST00000562290 498 ntBASIC3.11□□□□□ -1.91
PTGFRP43088 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
PTGFRP43088 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC3.11□□□□□ -1.91
PTGFRP43088 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC3.11□□□□□ -1.91
PTGFRP43088 BNIP3P26-201ENST00000600827 554 ntBASIC3.11□□□□□ -1.91
PTGFRP43088 AC006077.1-201ENST00000604746 343 ntBASIC3.11□□□□□ -1.91
PTGFRP43088 AL365400.2-201ENST00000605604 902 ntBASIC3.11□□□□□ -1.91
PTGFRP43088 AL354798.1-201ENST00000622505 329 ntBASIC3.11□□□□□ -1.91
PTGFRP43088 CRYM-AS1-204ENST00000637983 556 ntBASIC3.11□□□□□ -1.91
PTGFRP43088 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.11□□□□□ -1.91
PTGFRP43088 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.11□□□□□ -1.91
PTGFRP43088 AC007656.2-201ENST00000624902 4547 ntBASIC3.11□□□□□ -1.91
PTGFRP43088 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC3.1□□□□□ -1.91
PTGFRP43088 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.1□□□□□ -1.91
PTGFRP43088 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC3.1□□□□□ -1.91
PTGFRP43088 AP002088.1-201ENST00000382740 395 ntBASIC3.1□□□□□ -1.91
PTGFRP43088 Y_RNA.408-201ENST00000383987 102 ntBASIC3.1□□□□□ -1.91
PTGFRP43088 Y_RNA.472-201ENST00000384322 102 ntBASIC3.1□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 83.3 ms