Protein–RNA interactions for Protein: P31415

CASQ1, Calsequestrin-1, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASQ1P31415 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.17□□□□□ -1.9
CASQ1P31415 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
CASQ1P31415 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC3.17□□□□□ -1.9
CASQ1P31415 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
CASQ1P31415 AL513185.3-201ENST00000433335 1300 ntBASIC3.17□□□□□ -1.9
CASQ1P31415 AL049780.3-201ENST00000624612 1583 ntBASIC3.17□□□□□ -1.9
CASQ1P31415 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
CASQ1P31415 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
CASQ1P31415 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
CASQ1P31415 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
CASQ1P31415 DHFRP5-201ENST00000406944 564 ntBASIC3.16□□□□□ -1.9
CASQ1P31415 RPL7P37-201ENST00000425095 738 ntBASIC3.16□□□□□ -1.9
CASQ1P31415 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC3.16□□□□□ -1.9
CASQ1P31415 FABP5P3-201ENST00000437960 408 ntBASIC3.16□□□□□ -1.9
CASQ1P31415 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC3.16□□□□□ -1.9
CASQ1P31415 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC3.16□□□□□ -1.9
CASQ1P31415 MTND1P33-201ENST00000446251 917 ntBASIC3.16□□□□□ -1.9
CASQ1P31415 AC016696.1-201ENST00000446949 318 ntBASIC3.16□□□□□ -1.9
CASQ1P31415 OR6K5P-201ENST00000447050 945 ntBASIC3.16□□□□□ -1.9
CASQ1P31415 HMGN3P1-201ENST00000453847 193 ntBASIC3.16□□□□□ -1.9
CASQ1P31415 AC008155.2-201ENST00000464337 397 ntBASIC3.16□□□□□ -1.9
CASQ1P31415 NDUFA5P9-201ENST00000472609 340 ntBASIC3.16□□□□□ -1.9
CASQ1P31415 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC3.16□□□□□ -1.9
CASQ1P31415 AC008676.3-201ENST00000521237 435 ntBASIC3.16□□□□□ -1.9
CASQ1P31415 OR8K4P-201ENST00000534608 872 ntBASIC3.16□□□□□ -1.9
CASQ1P31415 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC3.16□□□□□ -1.9
CASQ1P31415 AC007673.1-201ENST00000590604 1100 ntTSL 5 BASIC3.16□□□□□ -1.9
CASQ1P31415 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC3.16□□□□□ -1.9
CASQ1P31415 AC090115.4-201ENST00000609970 188 ntBASIC3.16□□□□□ -1.9
CASQ1P31415 LINC00284-211ENST00000620454 534 ntTSL 4 BASIC3.16□□□□□ -1.9
CASQ1P31415 AC010338.1-201ENST00000621823 717 ntBASIC3.16□□□□□ -1.9
CASQ1P31415 AC099506.2-201ENST00000623074 221 ntBASIC3.16□□□□□ -1.9
CASQ1P31415 AC083865.1-201ENST00000636634 831 ntBASIC3.16□□□□□ -1.9
CASQ1P31415 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC3.15□□□□□ -1.9
CASQ1P31415 RNU6-1339P-201ENST00000363574 91 ntBASIC3.15□□□□□ -1.91
CASQ1P31415 OR6K3-202ENST00000368146 996 ntBASIC3.15□□□□□ -1.91
CASQ1P31415 RN7SKP159-201ENST00000410657 292 ntBASIC3.15□□□□□ -1.91
CASQ1P31415 AL356320.2-201ENST00000417263 507 ntBASIC3.15□□□□□ -1.91
CASQ1P31415 AC092427.1-202ENST00000430569 476 ntBASIC3.15□□□□□ -1.91
CASQ1P31415 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC3.15□□□□□ -1.91
CASQ1P31415 AC010099.1-201ENST00000455434 375 ntBASIC3.15□□□□□ -1.91
CASQ1P31415 AC092798.1-201ENST00000458542 409 ntBASIC3.15□□□□□ -1.91
CASQ1P31415 RN7SL385P-201ENST00000468873 276 ntBASIC3.15□□□□□ -1.91
CASQ1P31415 RN7SL297P-201ENST00000483161 293 ntBASIC3.15□□□□□ -1.91
CASQ1P31415 PRELID3BP6-201ENST00000503839 571 ntBASIC3.15□□□□□ -1.91
CASQ1P31415 AC010625.1-201ENST00000511296 403 ntBASIC3.15□□□□□ -1.91
CASQ1P31415 HMGB1P41-201ENST00000520234 440 ntBASIC3.15□□□□□ -1.91
CASQ1P31415 FAM60DP-201ENST00000524174 632 ntBASIC3.15□□□□□ -1.91
CASQ1P31415 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
CASQ1P31415 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
CASQ1P31415 MED28P6-201ENST00000558776 231 ntBASIC3.15□□□□□ -1.91
CASQ1P31415 RPL12P50-201ENST00000603116 116 ntBASIC3.15□□□□□ -1.91
CASQ1P31415 AC067959.1-201ENST00000604334 379 ntBASIC3.15□□□□□ -1.91
CASQ1P31415 AC138932.5-201ENST00000617759 563 ntBASIC3.15□□□□□ -1.91
CASQ1P31415 SNHG22-203ENST00000617833 660 ntBASIC3.15□□□□□ -1.91
CASQ1P31415 AC087359.1-201ENST00000508335 1740 ntBASIC3.15□□□□□ -1.91
CASQ1P31415 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC3.15□□□□□ -1.91
CASQ1P31415 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC3.15□□□□□ -1.91
CASQ1P31415 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC3.15□□□□□ -1.91
CASQ1P31415 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC3.15□□□□□ -1.91
CASQ1P31415 ZNF90P1-201ENST00000480493 1951 ntBASIC3.14□□□□□ -1.91
CASQ1P31415 ENSAP3-201ENST00000312710 333 ntBASIC3.14□□□□□ -1.91
CASQ1P31415 SNORA25.6-201ENST00000364121 118 ntBASIC3.14□□□□□ -1.91
CASQ1P31415 RNU1-85P-201ENST00000364127 164 ntBASIC3.14□□□□□ -1.91
CASQ1P31415 RNU6-173P-201ENST00000364215 104 ntBASIC3.14□□□□□ -1.91
CASQ1P31415 RNU6-730P-201ENST00000383954 104 ntBASIC3.14□□□□□ -1.91
CASQ1P31415 AL353692.2-201ENST00000407054 335 ntBASIC3.14□□□□□ -1.91
CASQ1P31415 SNORA11C-201ENST00000408532 129 ntBASIC3.14□□□□□ -1.91
CASQ1P31415 AC092638.1-201ENST00000411966 1275 ntBASIC3.14□□□□□ -1.91
CASQ1P31415 AL034347.1-201ENST00000420766 835 ntTSL 3 BASIC3.14□□□□□ -1.91
CASQ1P31415 EZH2P1-201ENST00000431167 291 ntBASIC3.14□□□□□ -1.91
CASQ1P31415 AL445584.1-201ENST00000431451 330 ntBASIC3.14□□□□□ -1.91
CASQ1P31415 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC3.14□□□□□ -1.91
CASQ1P31415 AL162389.1-201ENST00000449233 177 ntBASIC3.14□□□□□ -1.91
CASQ1P31415 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC3.14□□□□□ -1.91
CASQ1P31415 AC027673.1-201ENST00000456245 405 ntBASIC3.14□□□□□ -1.91
CASQ1P31415 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC3.14□□□□□ -1.91
CASQ1P31415 AC006445.2-201ENST00000510061 472 ntBASIC3.14□□□□□ -1.91
CASQ1P31415 HMGN1P15-201ENST00000513870 295 ntBASIC3.14□□□□□ -1.91
CASQ1P31415 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC3.14□□□□□ -1.91
CASQ1P31415 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC3.14□□□□□ -1.91
CASQ1P31415 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC3.14□□□□□ -1.91
CASQ1P31415 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC3.14□□□□□ -1.91
CASQ1P31415 CR589904.2-201ENST00000612533 440 ntBASIC3.14□□□□□ -1.91
CASQ1P31415 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC3.14□□□□□ -1.91
CASQ1P31415 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC3.14□□□□□ -1.91
CASQ1P31415 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC3.14□□□□□ -1.91
CASQ1P31415 FRG1DP-201ENST00000635586 771 ntBASIC3.14□□□□□ -1.91
CASQ1P31415 AC135776.4-201ENST00000624300 1904 ntBASIC3.14□□□□□ -1.91
CASQ1P31415 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
CASQ1P31415 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
CASQ1P31415 SNORA7.4-201ENST00000384249 137 ntBASIC3.13□□□□□ -1.91
CASQ1P31415 STAT4-203ENST00000409995 709 ntTSL 5 BASIC3.13□□□□□ -1.91
CASQ1P31415 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC3.13□□□□□ -1.91
CASQ1P31415 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC3.13□□□□□ -1.91
CASQ1P31415 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.13□□□□□ -1.91
CASQ1P31415 RSL24D1P6-201ENST00000426934 401 ntBASIC3.13□□□□□ -1.91
CASQ1P31415 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC3.13□□□□□ -1.91
CASQ1P31415 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC3.13□□□□□ -1.91
CASQ1P31415 HSFY3P-201ENST00000444242 1191 ntBASIC3.13□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 142.2 ms