Protein–RNA interactions for Protein: P31273

HOXC8, Homeobox protein Hox-C8, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8P31273 AL513174.1-201ENST00000423182 629 ntBASIC3.96□□□□□ -1.78
HOXC8P31273 USP9YP11-201ENST00000427537 717 ntBASIC3.96□□□□□ -1.78
HOXC8P31273 OFD1P12Y-201ENST00000427963 1207 ntBASIC3.96□□□□□ -1.78
HOXC8P31273 AC005300.1-201ENST00000428401 373 ntBASIC3.96□□□□□ -1.78
HOXC8P31273 TXNL1P1-201ENST00000429528 554 ntBASIC3.96□□□□□ -1.78
HOXC8P31273 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC3.96□□□□□ -1.78
HOXC8P31273 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC3.96□□□□□ -1.78
HOXC8P31273 OFD1P13Y-201ENST00000431179 1232 ntBASIC3.96□□□□□ -1.78
HOXC8P31273 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC3.96□□□□□ -1.78
HOXC8P31273 AL008629.1-201ENST00000438615 184 ntBASIC3.96□□□□□ -1.78
HOXC8P31273 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC3.96□□□□□ -1.78
HOXC8P31273 AC010655.1-201ENST00000449336 292 ntBASIC3.96□□□□□ -1.78
HOXC8P31273 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC3.96□□□□□ -1.78
HOXC8P31273 AC099563.1-201ENST00000456086 418 ntBASIC3.96□□□□□ -1.78
HOXC8P31273 U3.44-201ENST00000458938 192 ntBASIC3.96□□□□□ -1.78
HOXC8P31273 snoU13.24-201ENST00000458998 104 ntBASIC3.96□□□□□ -1.78
HOXC8P31273 AL136126.1-201ENST00000473603 402 ntBASIC3.96□□□□□ -1.78
HOXC8P31273 BET1P1-201ENST00000482276 359 ntBASIC3.96□□□□□ -1.78
HOXC8P31273 RPS3AP22-201ENST00000488297 769 ntBASIC3.96□□□□□ -1.78
HOXC8P31273 AC093767.1-201ENST00000504523 156 ntBASIC3.96□□□□□ -1.78
HOXC8P31273 AC026427.2-201ENST00000506228 536 ntBASIC3.96□□□□□ -1.78
HOXC8P31273 RNU6-579P-201ENST00000516879 102 ntBASIC3.96□□□□□ -1.78
HOXC8P31273 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
HOXC8P31273 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC3.96□□□□□ -1.78
HOXC8P31273 NACA-211ENST00000548563 827 ntTSL 5 BASIC3.96□□□□□ -1.78
HOXC8P31273 AC023161.2-201ENST00000551218 780 ntBASIC3.96□□□□□ -1.78
HOXC8P31273 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC3.96□□□□□ -1.78
HOXC8P31273 AC022662.1-201ENST00000580252 331 ntBASIC3.96□□□□□ -1.78
HOXC8P31273 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.96□□□□□ -1.78
HOXC8P31273 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC3.96□□□□□ -1.78
HOXC8P31273 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC3.96□□□□□ -1.78
HOXC8P31273 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC3.96□□□□□ -1.78
HOXC8P31273 YPEL5P2-201ENST00000605553 359 ntBASIC3.96□□□□□ -1.78
HOXC8P31273 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC3.96□□□□□ -1.78
HOXC8P31273 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC3.96□□□□□ -1.78
HOXC8P31273 AP000676.3-201ENST00000623299 569 ntBASIC3.96□□□□□ -1.78
HOXC8P31273 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC3.96□□□□□ -1.78
HOXC8P31273 MIR1322-201ENST00000638013 71 ntBASIC3.96□□□□□ -1.78
HOXC8P31273 USP8P1-201ENST00000494673 3183 ntBASIC3.96□□□□□ -1.78
HOXC8P31273 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
HOXC8P31273 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
HOXC8P31273 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
HOXC8P31273 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC3.96□□□□□ -1.78
HOXC8P31273 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
HOXC8P31273 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
HOXC8P31273 GDI2P1-201ENST00000429312 1336 ntBASIC3.95□□□□□ -1.78
HOXC8P31273 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
HOXC8P31273 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
HOXC8P31273 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC3.95□□□□□ -1.78
HOXC8P31273 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
HOXC8P31273 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.95□□□□□ -1.78
HOXC8P31273 BDP1P-201ENST00000582658 1990 ntBASIC3.95□□□□□ -1.78
HOXC8P31273 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
HOXC8P31273 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
HOXC8P31273 Y_RNA.25-201ENST00000362528 102 ntBASIC3.95□□□□□ -1.78
HOXC8P31273 RNU4-35P-201ENST00000362588 141 ntBASIC3.95□□□□□ -1.78
HOXC8P31273 SNORD113-6-201ENST00000363345 75 ntBASIC3.95□□□□□ -1.78
HOXC8P31273 SNORA7.2-201ENST00000364446 145 ntBASIC3.95□□□□□ -1.78
HOXC8P31273 RNU6-335P-201ENST00000364563 113 ntBASIC3.95□□□□□ -1.78
HOXC8P31273 SNORD82-201ENST00000365530 70 ntBASIC3.95□□□□□ -1.78
HOXC8P31273 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC3.95□□□□□ -1.78
HOXC8P31273 HMGB3P20-201ENST00000417997 600 ntBASIC3.95□□□□□ -1.78
HOXC8P31273 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC3.95□□□□□ -1.78
HOXC8P31273 RPL31P54-201ENST00000429803 370 ntBASIC3.95□□□□□ -1.78
HOXC8P31273 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC3.95□□□□□ -1.78
HOXC8P31273 HSD52-202ENST00000436225 772 ntTSL 3 BASIC3.95□□□□□ -1.78
HOXC8P31273 GTF2IP7-202ENST00000436677 309 ntBASIC3.95□□□□□ -1.78
HOXC8P31273 AC127537.2-201ENST00000439258 465 ntBASIC3.95□□□□□ -1.78
HOXC8P31273 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC3.95□□□□□ -1.78
HOXC8P31273 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC3.95□□□□□ -1.78
HOXC8P31273 BX510359.1-201ENST00000456973 237 ntBASIC3.95□□□□□ -1.78
HOXC8P31273 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC3.95□□□□□ -1.78
HOXC8P31273 RPL5P24-201ENST00000463742 885 ntBASIC3.95□□□□□ -1.78
HOXC8P31273 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC3.95□□□□□ -1.78
HOXC8P31273 OR5H5P-201ENST00000503164 928 ntBASIC3.95□□□□□ -1.78
HOXC8P31273 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC3.95□□□□□ -1.78
HOXC8P31273 Y_RNA.688-201ENST00000516565 95 ntBASIC3.95□□□□□ -1.78
HOXC8P31273 RN7SKP209-201ENST00000516888 304 ntBASIC3.95□□□□□ -1.78
HOXC8P31273 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC3.95□□□□□ -1.78
HOXC8P31273 TBCA-206ENST00000518338 551 ntTSL 2 BASIC3.95□□□□□ -1.78
HOXC8P31273 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC3.95□□□□□ -1.78
HOXC8P31273 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
HOXC8P31273 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
HOXC8P31273 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC3.95□□□□□ -1.78
HOXC8P31273 AL121766.1-201ENST00000547436 487 ntBASIC3.95□□□□□ -1.78
HOXC8P31273 MIR5186-201ENST00000577504 120 ntBASIC3.95□□□□□ -1.78
HOXC8P31273 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC3.95□□□□□ -1.78
HOXC8P31273 AL109653.1-201ENST00000603091 248 ntBASIC3.95□□□□□ -1.78
HOXC8P31273 AC069545.1-201ENST00000605671 358 ntBASIC3.95□□□□□ -1.78
HOXC8P31273 AC005332.6-201ENST00000613178 446 ntBASIC3.95□□□□□ -1.78
HOXC8P31273 AC107075.1-201ENST00000613695 314 ntBASIC3.95□□□□□ -1.78
HOXC8P31273 AC009318.4-201ENST00000620496 486 ntBASIC3.95□□□□□ -1.78
HOXC8P31273 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC3.95□□□□□ -1.78
HOXC8P31273 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC3.95□□□□□ -1.78
HOXC8P31273 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC3.95□□□□□ -1.78
HOXC8P31273 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC3.94□□□□□ -1.78
HOXC8P31273 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC3.94□□□□□ -1.78
HOXC8P31273 AP005901.5-201ENST00000545779 1796 ntBASIC3.94□□□□□ -1.78
HOXC8P31273 SNORA31-201ENST00000362607 130 ntBASIC3.94□□□□□ -1.78
HOXC8P31273 SNORA51.2-201ENST00000364595 132 ntBASIC3.94□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 79 ms