Protein–RNA interactions for Protein: P30622

CLIP1, CAP-Gly domain-containing linker protein 1, humanhuman

Predictions only

Length 1,438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1P30622 GSTA9P-201ENST00000406231 611 ntBASIC3.48□□□□□ -1.85
CLIP1P30622 AC009302.1-201ENST00000417147 390 ntBASIC3.48□□□□□ -1.85
CLIP1P30622 SRIP2-201ENST00000428470 166 ntBASIC3.48□□□□□ -1.85
CLIP1P30622 NPM1P49-201ENST00000448027 714 ntBASIC3.48□□□□□ -1.85
CLIP1P30622 Y_RNA.673-201ENST00000516306 88 ntBASIC3.48□□□□□ -1.85
CLIP1P30622 OR5D17P-201ENST00000531492 978 ntBASIC3.48□□□□□ -1.85
CLIP1P30622 MAGOH2P-202ENST00000584384 429 ntBASIC3.48□□□□□ -1.85
CLIP1P30622 AC010680.4-201ENST00000605334 543 ntBASIC3.48□□□□□ -1.85
CLIP1P30622 AL627309.6-201ENST00000606857 840 ntBASIC3.48□□□□□ -1.85
CLIP1P30622 AC117529.2-201ENST00000512159 2068 ntBASIC3.48□□□□□ -1.85
CLIP1P30622 AC002543.1-201ENST00000299783 1954 ntBASIC3.48□□□□□ -1.85
CLIP1P30622 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
CLIP1P30622 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC3.47□□□□□ -1.85
CLIP1P30622 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC3.47□□□□□ -1.85
CLIP1P30622 AC008571.1-201ENST00000467232 300 ntBASIC3.47□□□□□ -1.85
CLIP1P30622 THAP6-203ENST00000502620 582 ntTSL 3 BASIC3.47□□□□□ -1.85
CLIP1P30622 AC010198.2-201ENST00000550612 259 ntBASIC3.47□□□□□ -1.85
CLIP1P30622 SLC35A1-205ENST00000622775 1206 ntTSL 5 BASIC3.47□□□□□ -1.85
CLIP1P30622 SNORA50A-202ENST00000629536 136 ntBASIC3.47□□□□□ -1.85
CLIP1P30622 MTND5P7-201ENST00000413558 1798 ntBASIC3.47□□□□□ -1.85
CLIP1P30622 ZNF72P-201ENST00000425869 1908 ntBASIC3.47□□□□□ -1.85
CLIP1P30622 AC011155.1-201ENST00000316512 456 ntBASIC3.46□□□□□ -1.86
CLIP1P30622 RN7SKP32-201ENST00000410167 303 ntBASIC3.46□□□□□ -1.86
CLIP1P30622 MTCYBP31-201ENST00000438855 1122 ntBASIC3.46□□□□□ -1.86
CLIP1P30622 TRBV1-201ENST00000476502 284 ntBASIC3.46□□□□□ -1.86
CLIP1P30622 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC3.46□□□□□ -1.86
CLIP1P30622 AC106872.3-201ENST00000495104 446 ntBASIC3.46□□□□□ -1.86
CLIP1P30622 AC105339.2-201ENST00000558342 1091 ntTSL 3 BASIC3.46□□□□□ -1.86
CLIP1P30622 AC023813.4-201ENST00000607580 580 ntBASIC3.46□□□□□ -1.86
CLIP1P30622 AC010378.1-201ENST00000619270 362 ntBASIC3.46□□□□□ -1.86
CLIP1P30622 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC3.46□□□□□ -1.86
CLIP1P30622 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC3.46□□□□□ -1.86
CLIP1P30622 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
CLIP1P30622 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC3.46□□□□□ -1.86
CLIP1P30622 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC3.46□□□□□ -1.86
CLIP1P30622 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.46□□□□□ -1.86
CLIP1P30622 DHFRP5-201ENST00000406944 564 ntBASIC3.45□□□□□ -1.86
CLIP1P30622 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC3.45□□□□□ -1.86
CLIP1P30622 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC3.45□□□□□ -1.86
CLIP1P30622 SEC63P1-201ENST00000425785 1258 ntBASIC3.45□□□□□ -1.86
CLIP1P30622 AC010881.1-201ENST00000433830 235 ntBASIC3.45□□□□□ -1.86
CLIP1P30622 HMGB1P18-201ENST00000438801 619 ntBASIC3.45□□□□□ -1.86
CLIP1P30622 AC087385.1-201ENST00000475062 312 ntBASIC3.45□□□□□ -1.86
CLIP1P30622 MTND4P2-201ENST00000507767 1203 ntBASIC3.45□□□□□ -1.86
CLIP1P30622 AC138956.1-201ENST00000508187 504 ntTSL 3 BASIC3.45□□□□□ -1.86
CLIP1P30622 RN7SKP244-201ENST00000516513 307 ntBASIC3.45□□□□□ -1.86
CLIP1P30622 AC013562.2-201ENST00000611632 603 ntBASIC3.45□□□□□ -1.86
CLIP1P30622 ATP13A5-205ENST00000620313 709 ntTSL 5 BASIC3.45□□□□□ -1.86
CLIP1P30622 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC3.45□□□□□ -1.86
CLIP1P30622 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC3.45□□□□□ -1.86
CLIP1P30622 AC009452.1-201ENST00000640823 606 ntBASIC3.45□□□□□ -1.86
CLIP1P30622 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
CLIP1P30622 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC3.45□□□□□ -1.86
CLIP1P30622 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.45□□□□□ -1.86
CLIP1P30622 AL512646.1-201ENST00000269395 1077 ntBASIC3.44□□□□□ -1.86
CLIP1P30622 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC3.44□□□□□ -1.86
CLIP1P30622 AL139156.1-201ENST00000412785 841 ntBASIC3.44□□□□□ -1.86
CLIP1P30622 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC3.44□□□□□ -1.86
CLIP1P30622 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC3.44□□□□□ -1.86
CLIP1P30622 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC3.44□□□□□ -1.86
CLIP1P30622 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC3.44□□□□□ -1.86
CLIP1P30622 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC3.44□□□□□ -1.86
CLIP1P30622 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC3.44□□□□□ -1.86
CLIP1P30622 VN1R9P-201ENST00000614184 867 ntBASIC3.44□□□□□ -1.86
CLIP1P30622 AC123768.4-201ENST00000616244 701 ntBASIC3.44□□□□□ -1.86
CLIP1P30622 AC099063.3-201ENST00000642066 185 ntBASIC3.44□□□□□ -1.86
CLIP1P30622 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC3.44□□□□□ -1.86
CLIP1P30622 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC3.44□□□□□ -1.86
CLIP1P30622 MTCO1P14-201ENST00000441695 1559 ntBASIC3.44□□□□□ -1.86
CLIP1P30622 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC3.44□□□□□ -1.86
CLIP1P30622 RNA5SP88-201ENST00000365560 109 ntBASIC3.44□□□□□ -1.86
CLIP1P30622 U3.37-201ENST00000408528 213 ntBASIC3.44□□□□□ -1.86
CLIP1P30622 AL118520.1-201ENST00000450770 291 ntBASIC3.44□□□□□ -1.86
CLIP1P30622 HMGB1P15-201ENST00000453854 435 ntBASIC3.44□□□□□ -1.86
CLIP1P30622 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC3.44□□□□□ -1.86
CLIP1P30622 Y_RNA.676-201ENST00000516393 96 ntBASIC3.44□□□□□ -1.86
CLIP1P30622 AC135628.1-201ENST00000568867 534 ntBASIC3.44□□□□□ -1.86
CLIP1P30622 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC3.44□□□□□ -1.86
CLIP1P30622 AC009318.2-201ENST00000610917 651 ntBASIC3.44□□□□□ -1.86
CLIP1P30622 AC104237.2-201ENST00000612456 443 ntBASIC3.44□□□□□ -1.86
CLIP1P30622 MIR6132-201ENST00000622083 109 ntBASIC3.44□□□□□ -1.86
CLIP1P30622 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
CLIP1P30622 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC3.44□□□□□ -1.86
CLIP1P30622 OR5AQ1P-202ENST00000641257 1534 ntBASIC3.43□□□□□ -1.86
CLIP1P30622 CASP3-203ENST00000393588 677 ntTSL 4 BASIC3.43□□□□□ -1.86
CLIP1P30622 RNU2-2P-201ENST00000410396 191 ntBASIC3.43□□□□□ -1.86
CLIP1P30622 RANP7-201ENST00000418085 644 ntBASIC3.43□□□□□ -1.86
CLIP1P30622 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC3.43□□□□□ -1.86
CLIP1P30622 AC135999.1-201ENST00000478962 479 ntBASIC3.43□□□□□ -1.86
CLIP1P30622 CCNHP1-201ENST00000513311 678 ntBASIC3.43□□□□□ -1.86
CLIP1P30622 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC3.43□□□□□ -1.86
CLIP1P30622 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC3.43□□□□□ -1.86
CLIP1P30622 AC018630.1-201ENST00000541376 925 ntBASIC3.43□□□□□ -1.86
CLIP1P30622 AC073387.2-201ENST00000604797 784 ntBASIC3.43□□□□□ -1.86
CLIP1P30622 U2.15-201ENST00000611544 191 ntBASIC3.43□□□□□ -1.86
CLIP1P30622 U2.16-201ENST00000613119 191 ntBASIC3.43□□□□□ -1.86
CLIP1P30622 U2.12-201ENST00000613778 191 ntBASIC3.43□□□□□ -1.86
CLIP1P30622 U2.20-201ENST00000613956 192 ntBASIC3.43□□□□□ -1.86
CLIP1P30622 U2.9-201ENST00000615427 191 ntBASIC3.43□□□□□ -1.86
CLIP1P30622 U2.11-201ENST00000616345 191 ntBASIC3.43□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 114.8 ms