Protein–RNA interactions for Protein: P29973

CNGA1, cGMP-gated cation channel alpha-1, humanhuman

Predictions only

Length 690 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1P29973 AC068790.6-201ENST00000602558 258 ntBASIC5.07□□□□□ -1.6
CNGA1P29973 AC113403.1-201ENST00000604910 193 ntBASIC5.07□□□□□ -1.6
CNGA1P29973 AC055876.5-201ENST00000605667 259 ntBASIC5.07□□□□□ -1.6
CNGA1P29973 AC006133.1-201ENST00000617106 264 ntBASIC5.07□□□□□ -1.6
CNGA1P29973 AC112484.5-201ENST00000624189 228 ntBASIC5.07□□□□□ -1.6
CNGA1P29973 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
CNGA1P29973 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
CNGA1P29973 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
CNGA1P29973 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
CNGA1P29973 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
CNGA1P29973 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
CNGA1P29973 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC5.06□□□□□ -1.6
CNGA1P29973 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
CNGA1P29973 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
CNGA1P29973 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC5.06□□□□□ -1.6
CNGA1P29973 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
CNGA1P29973 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC5.06□□□□□ -1.6
CNGA1P29973 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
CNGA1P29973 FRG1BP-201ENST00000278882 761 ntBASIC5.06□□□□□ -1.6
CNGA1P29973 MIR372-201ENST00000362225 67 ntBASIC5.06□□□□□ -1.6
CNGA1P29973 RNU6-1279P-201ENST00000383917 103 ntBASIC5.06□□□□□ -1.6
CNGA1P29973 MIR124-3-201ENST00000384866 87 ntBASIC5.06□□□□□ -1.6
CNGA1P29973 MIR554-201ENST00000384874 96 ntBASIC5.06□□□□□ -1.6
CNGA1P29973 U3.20-201ENST00000390909 217 ntBASIC5.06□□□□□ -1.6
CNGA1P29973 RNU6-192P-201ENST00000391253 100 ntBASIC5.06□□□□□ -1.6
CNGA1P29973 RPS3AP3-201ENST00000411933 242 ntBASIC5.06□□□□□ -1.6
CNGA1P29973 AC092447.6-201ENST00000414578 210 ntBASIC5.06□□□□□ -1.6
CNGA1P29973 AL031779.1-201ENST00000415663 330 ntBASIC5.06□□□□□ -1.6
CNGA1P29973 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC5.06□□□□□ -1.6
CNGA1P29973 RPL7P2-201ENST00000427639 268 ntBASIC5.06□□□□□ -1.6
CNGA1P29973 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC5.06□□□□□ -1.6
CNGA1P29973 RPL22P17-201ENST00000438729 315 ntBASIC5.06□□□□□ -1.6
CNGA1P29973 RPS26P2-201ENST00000440331 348 ntBASIC5.06□□□□□ -1.6
CNGA1P29973 AC244505.5-201ENST00000443639 207 ntBASIC5.06□□□□□ -1.6
CNGA1P29973 RPL23AP43-201ENST00000446445 471 ntBASIC5.06□□□□□ -1.6
CNGA1P29973 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC5.06□□□□□ -1.6
CNGA1P29973 RPS27AP17-201ENST00000463344 455 ntBASIC5.06□□□□□ -1.6
CNGA1P29973 ST13P14-201ENST00000474095 734 ntBASIC5.06□□□□□ -1.6
CNGA1P29973 RNU6-720P-201ENST00000516363 108 ntBASIC5.06□□□□□ -1.6
CNGA1P29973 RNU1-45P-201ENST00000517191 141 ntBASIC5.06□□□□□ -1.6
CNGA1P29973 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
CNGA1P29973 DEFB109D-201ENST00000529497 240 ntBASIC5.06□□□□□ -1.6
CNGA1P29973 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC5.06□□□□□ -1.6
CNGA1P29973 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC5.06□□□□□ -1.6
CNGA1P29973 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC5.06□□□□□ -1.6
CNGA1P29973 RPL21P5-201ENST00000554662 472 ntBASIC5.06□□□□□ -1.6
CNGA1P29973 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC5.06□□□□□ -1.6
CNGA1P29973 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC5.06□□□□□ -1.6
CNGA1P29973 AC007599.1-201ENST00000568688 1174 ntBASIC5.06□□□□□ -1.6
CNGA1P29973 AC015912.2-201ENST00000571053 181 ntBASIC5.06□□□□□ -1.6
CNGA1P29973 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC5.06□□□□□ -1.6
CNGA1P29973 AC091805.2-201ENST00000603848 235 ntBASIC5.06□□□□□ -1.6
CNGA1P29973 AC011816.2-201ENST00000607089 556 ntBASIC5.06□□□□□ -1.6
CNGA1P29973 AC109347.2-201ENST00000610220 349 ntBASIC5.06□□□□□ -1.6
CNGA1P29973 AC087241.4-201ENST00000612441 480 ntBASIC5.06□□□□□ -1.6
CNGA1P29973 AC005332.10-201ENST00000612725 619 ntBASIC5.06□□□□□ -1.6
CNGA1P29973 AC008250.2-201ENST00000615261 205 ntBASIC5.06□□□□□ -1.6
CNGA1P29973 AL590099.1-201ENST00000615276 138 ntBASIC5.06□□□□□ -1.6
CNGA1P29973 AP001506.1-201ENST00000615444 211 ntBASIC5.06□□□□□ -1.6
CNGA1P29973 AC002550.2-201ENST00000621246 394 ntBASIC5.06□□□□□ -1.6
CNGA1P29973 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC5.06□□□□□ -1.6
CNGA1P29973 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC5.06□□□□□ -1.6
CNGA1P29973 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC5.06□□□□□ -1.6
CNGA1P29973 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
CNGA1P29973 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
CNGA1P29973 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC5.05□□□□□ -1.6
CNGA1P29973 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC5.05□□□□□ -1.6
CNGA1P29973 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
CNGA1P29973 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
CNGA1P29973 Y_RNA.517-201ENST00000384551 106 ntBASIC5.05□□□□□ -1.6
CNGA1P29973 RNU2-66P-201ENST00000410650 161 ntBASIC5.05□□□□□ -1.6
CNGA1P29973 AC078974.1-201ENST00000411597 223 ntBASIC5.05□□□□□ -1.6
CNGA1P29973 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC5.05□□□□□ -1.6
CNGA1P29973 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC5.05□□□□□ -1.6
CNGA1P29973 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC5.05□□□□□ -1.6
CNGA1P29973 AL353777.1-201ENST00000425552 326 ntBASIC5.05□□□□□ -1.6
CNGA1P29973 RPEP2-201ENST00000432149 701 ntBASIC5.05□□□□□ -1.6
CNGA1P29973 MTND1P34-201ENST00000438556 671 ntBASIC5.05□□□□□ -1.6
CNGA1P29973 MTND6P13-201ENST00000443510 523 ntBASIC5.05□□□□□ -1.6
CNGA1P29973 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC5.05□□□□□ -1.6
CNGA1P29973 MTCYBP1-201ENST00000454315 1119 ntBASIC5.05□□□□□ -1.6
CNGA1P29973 AC011825.1-201ENST00000484967 388 ntBASIC5.05□□□□□ -1.6
CNGA1P29973 AP002812.1-201ENST00000495378 474 ntBASIC5.05□□□□□ -1.6
CNGA1P29973 RPS4XP18-201ENST00000495480 763 ntBASIC5.05□□□□□ -1.6
CNGA1P29973 MTND2P33-201ENST00000506452 1031 ntBASIC5.05□□□□□ -1.6
CNGA1P29973 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
CNGA1P29973 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC5.05□□□□□ -1.6
CNGA1P29973 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC5.05□□□□□ -1.6
CNGA1P29973 AC017037.2-201ENST00000513850 890 ntBASIC5.05□□□□□ -1.6
CNGA1P29973 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC5.05□□□□□ -1.6
CNGA1P29973 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC5.05□□□□□ -1.6
CNGA1P29973 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC5.05□□□□□ -1.6
CNGA1P29973 AP003122.4-201ENST00000530980 758 ntBASIC5.05□□□□□ -1.6
CNGA1P29973 SETP2-201ENST00000553886 926 ntBASIC5.05□□□□□ -1.6
CNGA1P29973 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC5.05□□□□□ -1.6
CNGA1P29973 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC5.05□□□□□ -1.6
CNGA1P29973 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC5.05□□□□□ -1.6
CNGA1P29973 AC080078.2-201ENST00000603766 501 ntBASIC5.05□□□□□ -1.6
CNGA1P29973 LINC00901.1-201ENST00000617252 152 ntBASIC5.05□□□□□ -1.6
CNGA1P29973 uc_338.13-201ENST00000618243 179 ntBASIC5.05□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 79.8 ms