Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 AC010460.2-201ENST00000509054 677 ntBASIC3.34□□□□□ -1.87
PTPN6P29350 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC3.34□□□□□ -1.87
PTPN6P29350 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
PTPN6P29350 RN7SKP18-201ENST00000516005 275 ntBASIC3.34□□□□□ -1.87
PTPN6P29350 RNU2-27P-201ENST00000516185 142 ntBASIC3.34□□□□□ -1.87
PTPN6P29350 RNU6-1261P-201ENST00000517194 104 ntBASIC3.34□□□□□ -1.87
PTPN6P29350 AC091163.3-201ENST00000518269 1144 ntBASIC3.34□□□□□ -1.87
PTPN6P29350 AC087808.1-201ENST00000520501 361 ntBASIC3.34□□□□□ -1.87
PTPN6P29350 IGHV3-76-201ENST00000522465 295 ntBASIC3.34□□□□□ -1.87
PTPN6P29350 AC025437.3-201ENST00000523178 771 ntTSL 5 BASIC3.34□□□□□ -1.87
PTPN6P29350 PDCL2P2-201ENST00000533651 189 ntBASIC3.34□□□□□ -1.87
PTPN6P29350 AC018630.1-201ENST00000541376 925 ntBASIC3.34□□□□□ -1.87
PTPN6P29350 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC3.34□□□□□ -1.87
PTPN6P29350 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC3.34□□□□□ -1.87
PTPN6P29350 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC3.34□□□□□ -1.87
PTPN6P29350 AL390838.2-201ENST00000602394 274 ntBASIC3.34□□□□□ -1.87
PTPN6P29350 XIAPP1-201ENST00000603162 600 ntBASIC3.34□□□□□ -1.87
PTPN6P29350 AC069545.1-201ENST00000605671 358 ntBASIC3.34□□□□□ -1.87
PTPN6P29350 PART1_2.1-201ENST00000612397 250 ntBASIC3.34□□□□□ -1.87
PTPN6P29350 AC005332.6-201ENST00000613178 446 ntBASIC3.34□□□□□ -1.87
PTPN6P29350 DLEU1_1.1-201ENST00000618107 190 ntBASIC3.34□□□□□ -1.87
PTPN6P29350 AC010975.3-201ENST00000618727 978 ntBASIC3.34□□□□□ -1.87
PTPN6P29350 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC3.34□□□□□ -1.87
PTPN6P29350 AC084824.4-201ENST00000620106 731 ntBASIC3.34□□□□□ -1.87
PTPN6P29350 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC3.34□□□□□ -1.87
PTPN6P29350 TEX41-300ENST00000631048 69 ntTSL 5 BASIC3.34□□□□□ -1.87
PTPN6P29350 MKKS-204ENST00000639674 192 ntBASIC3.34□□□□□ -1.87
PTPN6P29350 AC119674.1-207ENST00000641355 633 ntBASIC3.34□□□□□ -1.87
PTPN6P29350 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
PTPN6P29350 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.34□□□□□ -1.88
PTPN6P29350 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
PTPN6P29350 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
PTPN6P29350 EFTUD1P2-201ENST00000514817 1603 ntBASIC3.33□□□□□ -1.88
PTPN6P29350 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
PTPN6P29350 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.33□□□□□ -1.88
PTPN6P29350 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.33□□□□□ -1.88
PTPN6P29350 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.33□□□□□ -1.88
PTPN6P29350 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.33□□□□□ -1.88
PTPN6P29350 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
PTPN6P29350 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
PTPN6P29350 RNU4-51P-201ENST00000364206 140 ntBASIC3.33□□□□□ -1.88
PTPN6P29350 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.33□□□□□ -1.88
PTPN6P29350 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.33□□□□□ -1.88
PTPN6P29350 MIR7-3-201ENST00000384898 110 ntBASIC3.33□□□□□ -1.88
PTPN6P29350 LUZP4P1-201ENST00000415420 344 ntBASIC3.33□□□□□ -1.88
PTPN6P29350 Z75741.2-201ENST00000417272 1167 ntBASIC3.33□□□□□ -1.88
PTPN6P29350 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC3.33□□□□□ -1.88
PTPN6P29350 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC3.33□□□□□ -1.88
PTPN6P29350 DUTP6-201ENST00000425573 462 ntBASIC3.33□□□□□ -1.88
PTPN6P29350 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC3.33□□□□□ -1.88
PTPN6P29350 RPL17P49-201ENST00000443728 411 ntBASIC3.33□□□□□ -1.88
PTPN6P29350 AL357552.1-201ENST00000445254 415 ntBASIC3.33□□□□□ -1.88
PTPN6P29350 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC3.33□□□□□ -1.88
PTPN6P29350 AC112492.1-201ENST00000449607 712 ntBASIC3.33□□□□□ -1.88
PTPN6P29350 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC3.33□□□□□ -1.88
PTPN6P29350 RPL12P26-201ENST00000452430 487 ntBASIC3.33□□□□□ -1.88
PTPN6P29350 FCF1P6-201ENST00000456841 595 ntBASIC3.33□□□□□ -1.88
PTPN6P29350 ARPC3P2-201ENST00000457786 533 ntBASIC3.33□□□□□ -1.88
PTPN6P29350 RPS23P3-201ENST00000470993 430 ntBASIC3.33□□□□□ -1.88
PTPN6P29350 AP000563.1-201ENST00000490865 758 ntBASIC3.33□□□□□ -1.88
PTPN6P29350 AC104619.4-201ENST00000510773 249 ntBASIC3.33□□□□□ -1.88
PTPN6P29350 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC3.33□□□□□ -1.88
PTPN6P29350 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC3.33□□□□□ -1.88
PTPN6P29350 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC3.33□□□□□ -1.88
PTPN6P29350 AC087481.2-201ENST00000565492 330 ntBASIC3.33□□□□□ -1.88
PTPN6P29350 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC3.33□□□□□ -1.88
PTPN6P29350 AC067852.3-201ENST00000589177 561 ntBASIC3.33□□□□□ -1.88
PTPN6P29350 AL110115.1-201ENST00000614396 364 ntBASIC3.33□□□□□ -1.88
PTPN6P29350 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC3.33□□□□□ -1.88
PTPN6P29350 AC004777.1-201ENST00000624317 287 ntBASIC3.33□□□□□ -1.88
PTPN6P29350 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC3.33□□□□□ -1.88
PTPN6P29350 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
PTPN6P29350 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
PTPN6P29350 AL645568.2-201ENST00000432815 1337 ntBASIC3.33□□□□□ -1.88
PTPN6P29350 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
PTPN6P29350 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
PTPN6P29350 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.33□□□□□ -1.88
PTPN6P29350 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
PTPN6P29350 MTCO1P23-201ENST00000415223 1526 ntBASIC3.33□□□□□ -1.88
PTPN6P29350 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC3.33□□□□□ -1.88
PTPN6P29350 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
PTPN6P29350 snoZ40.1-201ENST00000364540 72 ntBASIC3.32□□□□□ -1.88
PTPN6P29350 SNORA70.4-201ENST00000365509 134 ntBASIC3.32□□□□□ -1.88
PTPN6P29350 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
PTPN6P29350 U3.29-201ENST00000391296 212 ntBASIC3.32□□□□□ -1.88
PTPN6P29350 ARF4P3-201ENST00000397387 509 ntBASIC3.32□□□□□ -1.88
PTPN6P29350 RNU2-42P-201ENST00000410697 113 ntBASIC3.32□□□□□ -1.88
PTPN6P29350 RNA5SP31-201ENST00000411144 127 ntBASIC3.32□□□□□ -1.88
PTPN6P29350 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC3.32□□□□□ -1.88
PTPN6P29350 DBIP2-201ENST00000419076 262 ntBASIC3.32□□□□□ -1.88
PTPN6P29350 GTF2IP23-201ENST00000423746 351 ntBASIC3.32□□□□□ -1.88
PTPN6P29350 YME1L1P1-201ENST00000429435 297 ntBASIC3.32□□□□□ -1.88
PTPN6P29350 AC091286.1-201ENST00000431233 461 ntBASIC3.32□□□□□ -1.88
PTPN6P29350 BX679664.1-201ENST00000434429 253 ntBASIC3.32□□□□□ -1.88
PTPN6P29350 MTCYBP34-201ENST00000439552 670 ntBASIC3.32□□□□□ -1.88
PTPN6P29350 TXNP1-201ENST00000441872 371 ntBASIC3.32□□□□□ -1.88
PTPN6P29350 MTATP6P14-201ENST00000455189 673 ntBASIC3.32□□□□□ -1.88
PTPN6P29350 AC017015.1-201ENST00000477387 286 ntBASIC3.32□□□□□ -1.88
PTPN6P29350 AC106707.2-201ENST00000484182 374 ntBASIC3.32□□□□□ -1.88
PTPN6P29350 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC3.32□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 82.5 ms