Protein–RNA interactions for Protein: P24928

POLR2A, DNA-directed RNA polymerase II subunit RPB1, humanhuman

Known RBP Predictions only

Length 1,970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2AP24928 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC4.58□□□□□ -1.68
POLR2AP24928 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
POLR2AP24928 Y_RNA.38-201ENST00000362617 102 ntBASIC4.58□□□□□ -1.68
POLR2AP24928 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
POLR2AP24928 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC4.58□□□□□ -1.68
POLR2AP24928 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC4.58□□□□□ -1.68
POLR2AP24928 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC4.58□□□□□ -1.68
POLR2AP24928 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC4.58□□□□□ -1.68
POLR2AP24928 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC4.58□□□□□ -1.68
POLR2AP24928 ARPC3P1-201ENST00000437218 533 ntBASIC4.58□□□□□ -1.68
POLR2AP24928 SDCBPP1-201ENST00000440192 890 ntBASIC4.58□□□□□ -1.68
POLR2AP24928 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC4.58□□□□□ -1.68
POLR2AP24928 AC013267.1-201ENST00000458227 267 ntBASIC4.58□□□□□ -1.68
POLR2AP24928 RPL39P36-201ENST00000490784 156 ntBASIC4.58□□□□□ -1.68
POLR2AP24928 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC4.58□□□□□ -1.68
POLR2AP24928 HMGN1P11-201ENST00000508668 303 ntBASIC4.58□□□□□ -1.68
POLR2AP24928 BTG4P1-201ENST00000510421 183 ntBASIC4.58□□□□□ -1.68
POLR2AP24928 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC4.58□□□□□ -1.68
POLR2AP24928 RNY4P37-201ENST00000516225 96 ntBASIC4.58□□□□□ -1.68
POLR2AP24928 RNU6-1004P-201ENST00000516584 111 ntBASIC4.58□□□□□ -1.68
POLR2AP24928 RNU7-143P-201ENST00000516781 65 ntBASIC4.58□□□□□ -1.68
POLR2AP24928 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC4.58□□□□□ -1.68
POLR2AP24928 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC4.58□□□□□ -1.68
POLR2AP24928 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC4.58□□□□□ -1.68
POLR2AP24928 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC4.58□□□□□ -1.68
POLR2AP24928 CBX3P5-201ENST00000552017 521 ntBASIC4.58□□□□□ -1.68
POLR2AP24928 CFL2-206ENST00000556161 546 ntTSL 4 BASIC4.58□□□□□ -1.68
POLR2AP24928 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC4.58□□□□□ -1.68
POLR2AP24928 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
POLR2AP24928 AC012493.2-201ENST00000595083 291 ntBASIC4.58□□□□□ -1.68
POLR2AP24928 AC069304.2-201ENST00000605154 435 ntBASIC4.58□□□□□ -1.68
POLR2AP24928 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
POLR2AP24928 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
POLR2AP24928 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
POLR2AP24928 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
POLR2AP24928 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
POLR2AP24928 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
POLR2AP24928 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
POLR2AP24928 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
POLR2AP24928 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
POLR2AP24928 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
POLR2AP24928 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC4.57□□□□□ -1.68
POLR2AP24928 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC4.57□□□□□ -1.68
POLR2AP24928 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
POLR2AP24928 RNU6-692P-201ENST00000384496 107 ntBASIC4.57□□□□□ -1.68
POLR2AP24928 SNORD115-47-201ENST00000391226 86 ntBASIC4.57□□□□□ -1.68
POLR2AP24928 RBMY1KP-201ENST00000423480 476 ntBASIC4.57□□□□□ -1.68
POLR2AP24928 AL451074.3-201ENST00000437709 472 ntBASIC4.57□□□□□ -1.68
POLR2AP24928 AL831737.1-201ENST00000441288 271 ntBASIC4.57□□□□□ -1.68
POLR2AP24928 MTND6P13-201ENST00000443510 523 ntBASIC4.57□□□□□ -1.68
POLR2AP24928 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC4.57□□□□□ -1.68
POLR2AP24928 RPL21P71-201ENST00000465598 459 ntBASIC4.57□□□□□ -1.68
POLR2AP24928 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC4.57□□□□□ -1.68
POLR2AP24928 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC4.57□□□□□ -1.68
POLR2AP24928 SNORA18.6-201ENST00000516792 115 ntBASIC4.57□□□□□ -1.68
POLR2AP24928 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC4.57□□□□□ -1.68
POLR2AP24928 AC022968.1-201ENST00000567372 442 ntBASIC4.57□□□□□ -1.68
POLR2AP24928 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC4.57□□□□□ -1.68
POLR2AP24928 AC135507.2-201ENST00000612443 309 ntBASIC4.57□□□□□ -1.68
POLR2AP24928 MIR8057-201ENST00000620957 69 ntBASIC4.57□□□□□ -1.68
POLR2AP24928 AL359880.1-201ENST00000621879 266 ntBASIC4.57□□□□□ -1.68
POLR2AP24928 AC005858.4-201ENST00000623191 700 ntBASIC4.57□□□□□ -1.68
POLR2AP24928 AC079228.1-201ENST00000624774 1049 ntBASIC4.57□□□□□ -1.68
POLR2AP24928 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
POLR2AP24928 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC4.57□□□□□ -1.68
POLR2AP24928 ZNF680P1-201ENST00000436625 1469 ntBASIC4.57□□□□□ -1.68
POLR2AP24928 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
POLR2AP24928 AC093311.1-201ENST00000506586 2021 ntBASIC4.57□□□□□ -1.68
POLR2AP24928 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
POLR2AP24928 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC4.57□□□□□ -1.68
POLR2AP24928 PCDH15-205ENST00000373957 7032 ntTSL 5 BASIC4.57□□□□□ -1.68
POLR2AP24928 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
POLR2AP24928 RNU6-621P-201ENST00000364752 109 ntBASIC4.56□□□□□ -1.68
POLR2AP24928 MIR128-1-201ENST00000384921 82 ntBASIC4.56□□□□□ -1.68
POLR2AP24928 MIR195-201ENST00000385194 87 ntBASIC4.56□□□□□ -1.68
POLR2AP24928 MT-TP-201ENST00000387461 68 ntBASIC4.56□□□□□ -1.68
POLR2AP24928 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC4.56□□□□□ -1.68
POLR2AP24928 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC4.56□□□□□ -1.68
POLR2AP24928 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC4.56□□□□□ -1.68
POLR2AP24928 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC4.56□□□□□ -1.68
POLR2AP24928 AC090602.1-201ENST00000469695 252 ntBASIC4.56□□□□□ -1.68
POLR2AP24928 RBM43P1-201ENST00000476891 1081 ntBASIC4.56□□□□□ -1.68
POLR2AP24928 AP000797.1-201ENST00000478870 387 ntBASIC4.56□□□□□ -1.68
POLR2AP24928 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
POLR2AP24928 AC010342.1-201ENST00000514047 877 ntBASIC4.56□□□□□ -1.68
POLR2AP24928 GMPSP1-201ENST00000514075 579 ntBASIC4.56□□□□□ -1.68
POLR2AP24928 AC090136.1-201ENST00000520009 240 ntBASIC4.56□□□□□ -1.68
POLR2AP24928 AC087369.1-201ENST00000520775 996 ntBASIC4.56□□□□□ -1.68
POLR2AP24928 AP005639.2-201ENST00000527592 928 ntBASIC4.56□□□□□ -1.68
POLR2AP24928 AP002748.2-201ENST00000528671 348 ntBASIC4.56□□□□□ -1.68
POLR2AP24928 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC4.56□□□□□ -1.68
POLR2AP24928 AC092747.2-201ENST00000545069 983 ntBASIC4.56□□□□□ -1.68
POLR2AP24928 POLR2KP1-201ENST00000553226 168 ntBASIC4.56□□□□□ -1.68
POLR2AP24928 EIF5A2P1-201ENST00000564027 460 ntBASIC4.56□□□□□ -1.68
POLR2AP24928 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC4.56□□□□□ -1.68
POLR2AP24928 AL020991.1-201ENST00000612314 373 ntBASIC4.56□□□□□ -1.68
POLR2AP24928 AC006378.2-201ENST00000623178 2476 ntBASIC4.56□□□□□ -1.68
POLR2AP24928 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
POLR2AP24928 ZNF37BP-203ENST00000452306 1352 ntBASIC4.56□□□□□ -1.68
POLR2AP24928 KCNMB2-210ENST00000617329 2214 ntTSL 2 BASIC4.56□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 80.2 ms