Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC6.09□□□□□ -1.43
RFX1P22670 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC6.09□□□□□ -1.43
RFX1P22670 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC6.09□□□□□ -1.43
RFX1P22670 CASC22-201ENST00000569713 386 ntTSL 5 BASIC6.09□□□□□ -1.43
RFX1P22670 AC012182.1-201ENST00000570133 895 ntBASIC6.09□□□□□ -1.43
RFX1P22670 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC6.09□□□□□ -1.43
RFX1P22670 AC008521.1-201ENST00000587471 187 ntBASIC6.09□□□□□ -1.43
RFX1P22670 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC6.09□□□□□ -1.43
RFX1P22670 AC006504.6-201ENST00000590142 199 ntBASIC6.09□□□□□ -1.43
RFX1P22670 SNRPGP17-201ENST00000603780 214 ntBASIC6.09□□□□□ -1.43
RFX1P22670 IMMP1LP3-201ENST00000604197 224 ntBASIC6.09□□□□□ -1.43
RFX1P22670 U73479.1-201ENST00000618062 168 ntBASIC6.09□□□□□ -1.43
RFX1P22670 AC007998.5-201ENST00000622938 237 ntBASIC6.09□□□□□ -1.43
RFX1P22670 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
RFX1P22670 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
RFX1P22670 AC006206.1-201ENST00000544842 3387 ntBASIC6.09□□□□□ -1.44
RFX1P22670 TEK-205ENST00000615002 4666 ntTSL 5 BASIC6.08□□□□□ -1.44
RFX1P22670 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
RFX1P22670 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC6.08□□□□□ -1.44
RFX1P22670 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
RFX1P22670 MIR369-201ENST00000362155 70 ntBASIC6.08□□□□□ -1.44
RFX1P22670 RNA5SP326-201ENST00000363209 110 ntBASIC6.08□□□□□ -1.44
RFX1P22670 RNU6-946P-201ENST00000383878 107 ntBASIC6.08□□□□□ -1.44
RFX1P22670 Y_RNA.422-201ENST00000384054 114 ntBASIC6.08□□□□□ -1.44
RFX1P22670 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
RFX1P22670 EIF4E2P1-201ENST00000393781 255 ntBASIC6.08□□□□□ -1.44
RFX1P22670 RPL5P18-201ENST00000406671 891 ntBASIC6.08□□□□□ -1.44
RFX1P22670 POLHP1-201ENST00000411806 470 ntBASIC6.08□□□□□ -1.44
RFX1P22670 RPL30P2-201ENST00000414021 291 ntBASIC6.08□□□□□ -1.44
RFX1P22670 GJA6P-201ENST00000415117 1042 ntBASIC6.08□□□□□ -1.44
RFX1P22670 AMMECR1LP1-201ENST00000415152 841 ntBASIC6.08□□□□□ -1.44
RFX1P22670 EEF1A1P29-201ENST00000416082 1096 ntBASIC6.08□□□□□ -1.44
RFX1P22670 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC6.08□□□□□ -1.44
RFX1P22670 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC6.08□□□□□ -1.44
RFX1P22670 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC6.08□□□□□ -1.44
RFX1P22670 COPS8P2-201ENST00000473228 627 ntBASIC6.08□□□□□ -1.44
RFX1P22670 AC010631.1-201ENST00000474150 156 ntBASIC6.08□□□□□ -1.44
RFX1P22670 RPL21P103-201ENST00000479921 488 ntBASIC6.08□□□□□ -1.44
RFX1P22670 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC6.08□□□□□ -1.44
RFX1P22670 LIAS-206ENST00000513731 826 ntTSL 5 BASIC6.08□□□□□ -1.44
RFX1P22670 IGLV3-30-201ENST00000524362 298 ntBASIC6.08□□□□□ -1.44
RFX1P22670 AP001922.4-201ENST00000526967 290 ntBASIC6.08□□□□□ -1.44
RFX1P22670 RANP3-201ENST00000530970 276 ntBASIC6.08□□□□□ -1.44
RFX1P22670 DCN-210ENST00000547568 823 ntTSL 3 BASIC6.08□□□□□ -1.44
RFX1P22670 AC093012.1-202ENST00000549403 582 ntBASIC6.08□□□□□ -1.44
RFX1P22670 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC6.08□□□□□ -1.44
RFX1P22670 FKBP1AP1-201ENST00000594588 318 ntBASIC6.08□□□□□ -1.44
RFX1P22670 MIR6133-201ENST00000617057 108 ntBASIC6.08□□□□□ -1.44
RFX1P22670 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC6.08□□□□□ -1.44
RFX1P22670 AL359757.2-201ENST00000624309 274 ntBASIC6.08□□□□□ -1.44
RFX1P22670 SERPINB7-202ENST00000398019 2203 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
RFX1P22670 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
RFX1P22670 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC6.08□□□□□ -1.44
RFX1P22670 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC6.08□□□□□ -1.44
RFX1P22670 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC6.08□□□□□ -1.44
RFX1P22670 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC6.08□□□□□ -1.44
RFX1P22670 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC6.08□□□□□ -1.44
RFX1P22670 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC6.07□□□□□ -1.44
RFX1P22670 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC6.07□□□□□ -1.44
RFX1P22670 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC6.07□□□□□ -1.44
RFX1P22670 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
RFX1P22670 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
RFX1P22670 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC6.07□□□□□ -1.44
RFX1P22670 AC007938.2-201ENST00000604666 2634 ntBASIC6.07□□□□□ -1.44
RFX1P22670 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC6.07□□□□□ -1.44
RFX1P22670 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
RFX1P22670 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC6.07□□□□□ -1.44
RFX1P22670 RN7SKP145-201ENST00000363291 303 ntBASIC6.07□□□□□ -1.44
RFX1P22670 SNORA63C-201ENST00000364578 129 ntBASIC6.07□□□□□ -1.44
RFX1P22670 SMIM11P1-201ENST00000369586 178 ntBASIC6.07□□□□□ -1.44
RFX1P22670 MIR135A2-201ENST00000384854 100 ntBASIC6.07□□□□□ -1.44
RFX1P22670 RNU6-837P-201ENST00000391056 108 ntBASIC6.07□□□□□ -1.44
RFX1P22670 OFD1P1Y-201ENST00000411756 1225 ntBASIC6.07□□□□□ -1.44
RFX1P22670 AC074085.1-201ENST00000413598 418 ntBASIC6.07□□□□□ -1.44
RFX1P22670 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC6.07□□□□□ -1.44
RFX1P22670 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC6.07□□□□□ -1.44
RFX1P22670 AC093106.2-201ENST00000428212 385 ntBASIC6.07□□□□□ -1.44
RFX1P22670 AL451139.1-201ENST00000434718 346 ntBASIC6.07□□□□□ -1.44
RFX1P22670 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC6.07□□□□□ -1.44
RFX1P22670 Y_RNA.631-201ENST00000459607 101 ntBASIC6.07□□□□□ -1.44
RFX1P22670 AC004801.2-202ENST00000463559 283 ntBASIC6.07□□□□□ -1.44
RFX1P22670 AC130509.1-201ENST00000464158 433 ntBASIC6.07□□□□□ -1.44
RFX1P22670 OARD1-211ENST00000480585 829 ntTSL 3 BASIC6.07□□□□□ -1.44
RFX1P22670 AC231760.1-201ENST00000498002 260 ntBASIC6.07□□□□□ -1.44
RFX1P22670 RNU6-566P-201ENST00000516790 107 ntBASIC6.07□□□□□ -1.44
RFX1P22670 HMGB1P19-201ENST00000517578 577 ntBASIC6.07□□□□□ -1.44
RFX1P22670 HIGD1AP5-201ENST00000529959 259 ntBASIC6.07□□□□□ -1.44
RFX1P22670 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC6.07□□□□□ -1.44
RFX1P22670 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC6.07□□□□□ -1.44
RFX1P22670 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
RFX1P22670 MTCYBP13-201ENST00000578634 1093 ntBASIC6.07□□□□□ -1.44
RFX1P22670 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC6.07□□□□□ -1.44
RFX1P22670 AL080274.1-201ENST00000605565 220 ntBASIC6.07□□□□□ -1.44
RFX1P22670 AL627309.6-201ENST00000606857 840 ntBASIC6.07□□□□□ -1.44
RFX1P22670 AL022394.1-201ENST00000606979 292 ntBASIC6.07□□□□□ -1.44
RFX1P22670 AC103705.1-201ENST00000619013 241 ntBASIC6.07□□□□□ -1.44
RFX1P22670 NEK3-211ENST00000629912 141 ntTSL 5 BASIC6.07□□□□□ -1.44
RFX1P22670 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC6.07□□□□□ -1.44
RFX1P22670 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
RFX1P22670 MPP5-204ENST00000555925 5006 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 99.5 ms