Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 AC008083.4-201ENST00000615076 444 ntBASIC3.69□□□□□ -1.82
CDH3P22223 AC006133.1-201ENST00000617106 264 ntBASIC3.69□□□□□ -1.82
CDH3P22223 AC092650.2-201ENST00000619984 902 ntBASIC3.69□□□□□ -1.82
CDH3P22223 CR392039.5-201ENST00000623201 510 ntBASIC3.69□□□□□ -1.82
CDH3P22223 AC007490.1-201ENST00000624321 703 ntBASIC3.69□□□□□ -1.82
CDH3P22223 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC3.69□□□□□ -1.82
CDH3P22223 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC3.69□□□□□ -1.82
CDH3P22223 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.69□□□□□ -1.82
CDH3P22223 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
CDH3P22223 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC3.69□□□□□ -1.82
CDH3P22223 AC005539.1-201ENST00000443768 1479 ntBASIC3.68□□□□□ -1.82
CDH3P22223 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.68□□□□□ -1.82
CDH3P22223 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
CDH3P22223 SNORA51.6-201ENST00000384151 125 ntBASIC3.68□□□□□ -1.82
CDH3P22223 MIR199A2-201ENST00000385289 110 ntBASIC3.68□□□□□ -1.82
CDH3P22223 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC3.68□□□□□ -1.82
CDH3P22223 RNU2-71P-201ENST00000411395 189 ntBASIC3.68□□□□□ -1.82
CDH3P22223 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC3.68□□□□□ -1.82
CDH3P22223 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC3.68□□□□□ -1.82
CDH3P22223 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC3.68□□□□□ -1.82
CDH3P22223 MTCYBP24-201ENST00000420387 1106 ntBASIC3.68□□□□□ -1.82
CDH3P22223 AC018644.1-201ENST00000429934 551 ntBASIC3.68□□□□□ -1.82
CDH3P22223 RPS25P9-201ENST00000435591 252 ntBASIC3.68□□□□□ -1.82
CDH3P22223 Z74696.2-201ENST00000436514 498 ntBASIC3.68□□□□□ -1.82
CDH3P22223 NOTCH2P1-201ENST00000443481 624 ntBASIC3.68□□□□□ -1.82
CDH3P22223 RPS17P13-201ENST00000448974 407 ntBASIC3.68□□□□□ -1.82
CDH3P22223 AC010468.1-201ENST00000461022 817 ntBASIC3.68□□□□□ -1.82
CDH3P22223 AC092757.1-201ENST00000467293 467 ntBASIC3.68□□□□□ -1.82
CDH3P22223 RPL7P24-201ENST00000493052 752 ntBASIC3.68□□□□□ -1.82
CDH3P22223 NAA50-206ENST00000493454 964 ntTSL 2 BASIC3.68□□□□□ -1.82
CDH3P22223 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC3.68□□□□□ -1.82
CDH3P22223 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
CDH3P22223 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC3.68□□□□□ -1.82
CDH3P22223 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC3.68□□□□□ -1.82
CDH3P22223 IGKV2D-19-201ENST00000523346 262 ntBASIC3.68□□□□□ -1.82
CDH3P22223 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC3.68□□□□□ -1.82
CDH3P22223 AC092470.1-201ENST00000546187 132 ntBASIC3.68□□□□□ -1.82
CDH3P22223 GLIPR1L1-204ENST00000548623 484 ntTSL 3 BASIC3.68□□□□□ -1.82
CDH3P22223 SYF2P1-201ENST00000550658 413 ntBASIC3.68□□□□□ -1.82
CDH3P22223 AC009712.1-201ENST00000564938 316 ntBASIC3.68□□□□□ -1.82
CDH3P22223 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC3.68□□□□□ -1.82
CDH3P22223 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC3.68□□□□□ -1.82
CDH3P22223 VN1R82P-201ENST00000601481 356 ntBASIC3.68□□□□□ -1.82
CDH3P22223 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC3.68□□□□□ -1.82
CDH3P22223 AL031281.1-201ENST00000604049 488 ntBASIC3.68□□□□□ -1.82
CDH3P22223 AL592221.1-201ENST00000605266 382 ntBASIC3.68□□□□□ -1.82
CDH3P22223 AL391497.1-201ENST00000608671 547 ntBASIC3.68□□□□□ -1.82
CDH3P22223 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC3.68□□□□□ -1.82
CDH3P22223 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC3.68□□□□□ -1.82
CDH3P22223 U73479.1-201ENST00000618062 168 ntBASIC3.68□□□□□ -1.82
CDH3P22223 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC3.68□□□□□ -1.82
CDH3P22223 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
CDH3P22223 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
CDH3P22223 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.68□□□□□ -1.82
CDH3P22223 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.68□□□□□ -1.82
CDH3P22223 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
CDH3P22223 NF1-214ENST00000490416 1329 ntTSL 3 BASIC3.68□□□□□ -1.82
CDH3P22223 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC3.68□□□□□ -1.82
CDH3P22223 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC3.67□□□□□ -1.82
CDH3P22223 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
CDH3P22223 MTND4P34-201ENST00000572715 1371 ntBASIC3.67□□□□□ -1.82
CDH3P22223 PABPC1P7-201ENST00000413177 1513 ntBASIC3.67□□□□□ -1.82
CDH3P22223 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
CDH3P22223 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.67□□□□□ -1.82
CDH3P22223 MIR23B-201ENST00000384832 97 ntBASIC3.67□□□□□ -1.82
CDH3P22223 MIR200C-201ENST00000384980 68 ntBASIC3.67□□□□□ -1.82
CDH3P22223 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
CDH3P22223 RPL23AP29-201ENST00000397284 453 ntBASIC3.67□□□□□ -1.82
CDH3P22223 ARF4P3-201ENST00000397387 509 ntBASIC3.67□□□□□ -1.82
CDH3P22223 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC3.67□□□□□ -1.82
CDH3P22223 TIMM9P2-201ENST00000419324 266 ntBASIC3.67□□□□□ -1.82
CDH3P22223 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC3.67□□□□□ -1.82
CDH3P22223 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
CDH3P22223 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
CDH3P22223 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
CDH3P22223 SKP1P1-201ENST00000438081 489 ntBASIC3.67□□□□□ -1.82
CDH3P22223 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC3.67□□□□□ -1.82
CDH3P22223 SETD6P1-201ENST00000444575 317 ntBASIC3.67□□□□□ -1.82
CDH3P22223 VN1R10P-201ENST00000447106 875 ntBASIC3.67□□□□□ -1.82
CDH3P22223 MTCYBP11-201ENST00000447254 1109 ntBASIC3.67□□□□□ -1.82
CDH3P22223 AL133547.1-201ENST00000448546 220 ntBASIC3.67□□□□□ -1.82
CDH3P22223 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC3.67□□□□□ -1.82
CDH3P22223 RPL7P15-201ENST00000461190 712 ntBASIC3.67□□□□□ -1.82
CDH3P22223 AC092754.2-201ENST00000463506 460 ntBASIC3.67□□□□□ -1.82
CDH3P22223 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC3.67□□□□□ -1.82
CDH3P22223 AP002812.1-201ENST00000495378 474 ntBASIC3.67□□□□□ -1.82
CDH3P22223 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
CDH3P22223 MTCYBP17-201ENST00000503579 789 ntBASIC3.67□□□□□ -1.82
CDH3P22223 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
CDH3P22223 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC3.67□□□□□ -1.82
CDH3P22223 HMGN1P11-201ENST00000508668 303 ntBASIC3.67□□□□□ -1.82
CDH3P22223 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC3.67□□□□□ -1.82
CDH3P22223 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC3.67□□□□□ -1.82
CDH3P22223 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC3.67□□□□□ -1.82
CDH3P22223 AP003461.1-201ENST00000528866 78 ntBASIC3.67□□□□□ -1.82
CDH3P22223 OR4A45P-201ENST00000529954 901 ntBASIC3.67□□□□□ -1.82
CDH3P22223 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC3.67□□□□□ -1.82
CDH3P22223 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC3.67□□□□□ -1.82
CDH3P22223 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC3.67□□□□□ -1.82
CDH3P22223 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.67□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 78.4 ms