Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
XRCC1P18887 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.3□□□□□ -1.88
XRCC1P18887 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
XRCC1P18887 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC3.3□□□□□ -1.88
XRCC1P18887 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.3□□□□□ -1.88
XRCC1P18887 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
XRCC1P18887 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
XRCC1P18887 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
XRCC1P18887 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.3□□□□□ -1.88
XRCC1P18887 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
XRCC1P18887 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC3.29□□□□□ -1.88
XRCC1P18887 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
XRCC1P18887 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.29□□□□□ -1.88
XRCC1P18887 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
XRCC1P18887 RPL7P26-201ENST00000333817 754 ntBASIC3.29□□□□□ -1.88
XRCC1P18887 GSTA1-201ENST00000334575 1019 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
XRCC1P18887 SNORA7.2-201ENST00000364446 145 ntBASIC3.29□□□□□ -1.88
XRCC1P18887 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
XRCC1P18887 SUGT1P1-201ENST00000379514 476 ntBASIC3.29□□□□□ -1.88
XRCC1P18887 RNU6-339P-201ENST00000384310 107 ntBASIC3.29□□□□□ -1.88
XRCC1P18887 BX323014.1-201ENST00000412876 237 ntBASIC3.29□□□□□ -1.88
XRCC1P18887 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC3.29□□□□□ -1.88
XRCC1P18887 NEK4P1-201ENST00000433383 879 ntBASIC3.29□□□□□ -1.88
XRCC1P18887 RPL21P112-201ENST00000434403 463 ntBASIC3.29□□□□□ -1.88
XRCC1P18887 FTH1P1-201ENST00000437933 532 ntBASIC3.29□□□□□ -1.88
XRCC1P18887 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC3.29□□□□□ -1.88
XRCC1P18887 MTCO1P48-201ENST00000448024 1096 ntBASIC3.29□□□□□ -1.88
XRCC1P18887 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC3.29□□□□□ -1.88
XRCC1P18887 AC069528.1-202ENST00000482888 637 ntBASIC3.29□□□□□ -1.88
XRCC1P18887 AC112198.1-201ENST00000505369 1220 ntBASIC3.29□□□□□ -1.88
XRCC1P18887 MTCYBP37-201ENST00000510642 1133 ntBASIC3.29□□□□□ -1.88
XRCC1P18887 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC3.29□□□□□ -1.88
XRCC1P18887 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC3.29□□□□□ -1.88
XRCC1P18887 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC3.29□□□□□ -1.88
XRCC1P18887 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC3.29□□□□□ -1.88
XRCC1P18887 CD69-203ENST00000536709 1020 ntTSL 2 BASIC3.29□□□□□ -1.88
XRCC1P18887 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC3.29□□□□□ -1.88
XRCC1P18887 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC3.29□□□□□ -1.88
XRCC1P18887 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC3.29□□□□□ -1.88
XRCC1P18887 MIR5708-201ENST00000579723 85 ntBASIC3.29□□□□□ -1.88
XRCC1P18887 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.29□□□□□ -1.88
XRCC1P18887 MIR5195-201ENST00000583555 115 ntBASIC3.29□□□□□ -1.88
XRCC1P18887 AL669831.4-202ENST00000590817 238 ntBASIC3.29□□□□□ -1.88
XRCC1P18887 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC3.29□□□□□ -1.88
XRCC1P18887 SNRPGP15-201ENST00000600149 222 ntBASIC3.29□□□□□ -1.88
XRCC1P18887 AL022067.1-201ENST00000602426 454 ntBASIC3.29□□□□□ -1.88
XRCC1P18887 AL445435.1-201ENST00000604232 665 ntBASIC3.29□□□□□ -1.88
XRCC1P18887 AC024060.1-201ENST00000607052 494 ntBASIC3.29□□□□□ -1.88
XRCC1P18887 AC090116.1-201ENST00000615679 446 ntBASIC3.29□□□□□ -1.88
XRCC1P18887 OR1S1-201ENST00000624470 978 ntBASIC3.29□□□□□ -1.88
XRCC1P18887 AL672296.1-201ENST00000427780 2158 ntBASIC3.29□□□□□ -1.88
XRCC1P18887 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
XRCC1P18887 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
XRCC1P18887 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.28□□□□□ -1.88
XRCC1P18887 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
XRCC1P18887 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.28□□□□□ -1.88
XRCC1P18887 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
XRCC1P18887 RNU6-335P-201ENST00000364563 113 ntBASIC3.28□□□□□ -1.88
XRCC1P18887 RNU6-707P-201ENST00000364647 95 ntBASIC3.28□□□□□ -1.88
XRCC1P18887 RNU6-730P-201ENST00000383954 104 ntBASIC3.28□□□□□ -1.88
XRCC1P18887 RNU6-224P-201ENST00000384055 107 ntBASIC3.28□□□□□ -1.88
XRCC1P18887 TAF9BP1-201ENST00000396646 746 ntBASIC3.28□□□□□ -1.88
XRCC1P18887 MTND4LP20-201ENST00000402379 270 ntBASIC3.28□□□□□ -1.88
XRCC1P18887 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC3.28□□□□□ -1.88
XRCC1P18887 VN1R51P-201ENST00000411675 945 ntBASIC3.28□□□□□ -1.88
XRCC1P18887 HMGN1P24-201ENST00000412282 298 ntBASIC3.28□□□□□ -1.88
XRCC1P18887 AL136133.1-201ENST00000413694 376 ntBASIC3.28□□□□□ -1.88
XRCC1P18887 HMGB3P23-201ENST00000414981 585 ntBASIC3.28□□□□□ -1.88
XRCC1P18887 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC3.28□□□□□ -1.88
XRCC1P18887 AC092634.6-201ENST00000418558 192 ntBASIC3.28□□□□□ -1.88
XRCC1P18887 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC3.28□□□□□ -1.88
XRCC1P18887 MTCO3P1-205ENST00000422088 832 ntBASIC3.28□□□□□ -1.88
XRCC1P18887 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC3.28□□□□□ -1.88
XRCC1P18887 AC006548.1-201ENST00000427470 102 ntBASIC3.28□□□□□ -1.88
XRCC1P18887 HMGB3P11-201ENST00000440127 604 ntBASIC3.28□□□□□ -1.88
XRCC1P18887 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC3.28□□□□□ -1.88
XRCC1P18887 RPS3AP12-201ENST00000443616 753 ntBASIC3.28□□□□□ -1.88
XRCC1P18887 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC3.28□□□□□ -1.88
XRCC1P18887 NPM1P49-201ENST00000448027 714 ntBASIC3.28□□□□□ -1.88
XRCC1P18887 AC097262.1-201ENST00000452559 548 ntBASIC3.28□□□□□ -1.88
XRCC1P18887 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC3.28□□□□□ -1.88
XRCC1P18887 PNPLA4P1-201ENST00000458328 305 ntBASIC3.28□□□□□ -1.88
XRCC1P18887 RPL23AP67-201ENST00000465341 474 ntBASIC3.28□□□□□ -1.88
XRCC1P18887 AC104982.1-201ENST00000478775 574 ntBASIC3.28□□□□□ -1.88
XRCC1P18887 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC3.28□□□□□ -1.88
XRCC1P18887 RPL31P13-201ENST00000484151 370 ntBASIC3.28□□□□□ -1.88
XRCC1P18887 MTND3P3-201ENST00000505004 126 ntBASIC3.28□□□□□ -1.88
XRCC1P18887 MTCO3P44-201ENST00000510977 541 ntBASIC3.28□□□□□ -1.88
XRCC1P18887 RNU1-143P-201ENST00000516296 146 ntBASIC3.28□□□□□ -1.88
XRCC1P18887 SCARNA20.6-201ENST00000517251 106 ntBASIC3.28□□□□□ -1.88
XRCC1P18887 AC027309.2-201ENST00000520566 192 ntBASIC3.28□□□□□ -1.88
XRCC1P18887 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
XRCC1P18887 ARL1-211ENST00000551828 776 ntTSL 5 BASIC3.28□□□□□ -1.88
XRCC1P18887 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC3.28□□□□□ -1.88
XRCC1P18887 CFL2-206ENST00000556161 546 ntTSL 4 BASIC3.28□□□□□ -1.88
XRCC1P18887 AC012182.1-201ENST00000570133 895 ntBASIC3.28□□□□□ -1.88
XRCC1P18887 MIR4276-201ENST00000584832 70 ntBASIC3.28□□□□□ -1.88
XRCC1P18887 AC025588.3-201ENST00000604182 274 ntBASIC3.28□□□□□ -1.88
XRCC1P18887 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC3.28□□□□□ -1.88
XRCC1P18887 U1.23-201ENST00000610293 146 ntBASIC3.28□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 81.6 ms