Protein–RNA interactions for Protein: P16333

NCK1, Cytoplasmic protein NCK1, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1P16333 AL356274.2-201ENST00000624379 3752 ntBASIC3.05□□□□□ -1.92
NCK1P16333 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC3.05□□□□□ -1.92
NCK1P16333 RNU1-64P-201ENST00000365443 163 ntBASIC3.05□□□□□ -1.92
NCK1P16333 SNORA46-201ENST00000384762 135 ntBASIC3.05□□□□□ -1.92
NCK1P16333 RPL21P17-201ENST00000397467 475 ntBASIC3.05□□□□□ -1.92
NCK1P16333 AL035405.1-201ENST00000400795 710 ntBASIC3.05□□□□□ -1.92
NCK1P16333 MTCO1P56-201ENST00000401674 224 ntBASIC3.05□□□□□ -1.92
NCK1P16333 RNU6ATAC34P-201ENST00000408879 121 ntBASIC3.05□□□□□ -1.92
NCK1P16333 RNU2-28P-201ENST00000410457 189 ntBASIC3.05□□□□□ -1.92
NCK1P16333 AC245054.2-201ENST00000415639 319 ntBASIC3.05□□□□□ -1.92
NCK1P16333 RPL7P30-201ENST00000420888 709 ntBASIC3.05□□□□□ -1.92
NCK1P16333 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC3.05□□□□□ -1.92
NCK1P16333 MTCO1P39-201ENST00000426148 480 ntBASIC3.05□□□□□ -1.92
NCK1P16333 DPRXP1-201ENST00000426312 460 ntBASIC3.05□□□□□ -1.92
NCK1P16333 CYCSP4-201ENST00000429682 331 ntBASIC3.05□□□□□ -1.92
NCK1P16333 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC3.05□□□□□ -1.92
NCK1P16333 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
NCK1P16333 HMGB3P6-201ENST00000444896 598 ntBASIC3.05□□□□□ -1.92
NCK1P16333 MTCYBP11-201ENST00000447254 1109 ntBASIC3.05□□□□□ -1.92
NCK1P16333 USP9YP34-201ENST00000453983 808 ntBASIC3.05□□□□□ -1.92
NCK1P16333 ARPC3P2-201ENST00000457786 533 ntBASIC3.05□□□□□ -1.92
NCK1P16333 PNPLA4P1-201ENST00000458328 305 ntBASIC3.05□□□□□ -1.92
NCK1P16333 AC017015.1-201ENST00000477387 286 ntBASIC3.05□□□□□ -1.92
NCK1P16333 AC092902.1-201ENST00000486999 259 ntBASIC3.05□□□□□ -1.92
NCK1P16333 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
NCK1P16333 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC3.05□□□□□ -1.92
NCK1P16333 MLLT10P2-201ENST00000506434 249 ntBASIC3.05□□□□□ -1.92
NCK1P16333 AC010265.1-201ENST00000513509 211 ntBASIC3.05□□□□□ -1.92
NCK1P16333 APOOP4-201ENST00000513530 597 ntBASIC3.05□□□□□ -1.92
NCK1P16333 RN7SKP21-201ENST00000516503 220 ntBASIC3.05□□□□□ -1.92
NCK1P16333 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC3.05□□□□□ -1.92
NCK1P16333 AC103843.2-201ENST00000530523 682 ntBASIC3.05□□□□□ -1.92
NCK1P16333 SNRPGP16-201ENST00000533275 226 ntBASIC3.05□□□□□ -1.92
NCK1P16333 AC068339.2-201ENST00000534395 618 ntBASIC3.05□□□□□ -1.92
NCK1P16333 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
NCK1P16333 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC3.05□□□□□ -1.92
NCK1P16333 AC008507.2-201ENST00000588402 1176 ntBASIC3.05□□□□□ -1.92
NCK1P16333 AC093227.2-201ENST00000589357 285 ntBASIC3.05□□□□□ -1.92
NCK1P16333 AC012669.1-201ENST00000603209 283 ntBASIC3.05□□□□□ -1.92
NCK1P16333 AC099785.1-201ENST00000605697 437 ntBASIC3.05□□□□□ -1.92
NCK1P16333 AC092954.1-201ENST00000609121 445 ntBASIC3.05□□□□□ -1.92
NCK1P16333 AC107294.3-201ENST00000609211 526 ntBASIC3.05□□□□□ -1.92
NCK1P16333 AC124016.2-201ENST00000610058 665 ntBASIC3.05□□□□□ -1.92
NCK1P16333 AC010975.3-201ENST00000618727 978 ntBASIC3.05□□□□□ -1.92
NCK1P16333 AC068831.8-201ENST00000620171 435 ntBASIC3.05□□□□□ -1.92
NCK1P16333 AC007275.1-201ENST00000621243 671 ntBASIC3.05□□□□□ -1.92
NCK1P16333 AC034229.5-201ENST00000624258 185 ntBASIC3.05□□□□□ -1.92
NCK1P16333 AP003485.1-201ENST00000625093 753 ntBASIC3.05□□□□□ -1.92
NCK1P16333 CASC15-208ENST00000636388 1174 ntTSL 5 BASIC3.05□□□□□ -1.92
NCK1P16333 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.05□□□□□ -1.92
NCK1P16333 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.05□□□□□ -1.92
NCK1P16333 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
NCK1P16333 AC110774.1-201ENST00000623567 2018 ntBASIC3.04□□□□□ -1.92
NCK1P16333 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
NCK1P16333 AC016769.3-201ENST00000396562 315 ntBASIC3.04□□□□□ -1.92
NCK1P16333 AL136372.1-201ENST00000403060 228 ntBASIC3.04□□□□□ -1.92
NCK1P16333 AL079342.2-201ENST00000403367 482 ntBASIC3.04□□□□□ -1.92
NCK1P16333 AL445189.1-201ENST00000405722 338 ntBASIC3.04□□□□□ -1.92
NCK1P16333 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.04□□□□□ -1.92
NCK1P16333 RNU6-1077P-201ENST00000410506 102 ntBASIC3.04□□□□□ -1.92
NCK1P16333 RN7SKP27-201ENST00000410684 333 ntBASIC3.04□□□□□ -1.92
NCK1P16333 AC095032.2-201ENST00000414923 418 ntTSL 2 BASIC3.04□□□□□ -1.92
NCK1P16333 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC3.04□□□□□ -1.92
NCK1P16333 EBLN1-201ENST00000422359 1208 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
NCK1P16333 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC3.04□□□□□ -1.92
NCK1P16333 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC3.04□□□□□ -1.92
NCK1P16333 RPL23AP74-201ENST00000437246 471 ntBASIC3.04□□□□□ -1.92
NCK1P16333 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC3.04□□□□□ -1.92
NCK1P16333 ATP5C1P1-201ENST00000441945 895 ntBASIC3.04□□□□□ -1.92
NCK1P16333 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC3.04□□□□□ -1.92
NCK1P16333 RPL17P49-201ENST00000443728 411 ntBASIC3.04□□□□□ -1.92
NCK1P16333 MTCYBP42-201ENST00000444653 1130 ntBASIC3.04□□□□□ -1.92
NCK1P16333 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC3.04□□□□□ -1.92
NCK1P16333 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC3.04□□□□□ -1.92
NCK1P16333 AL121970.1-201ENST00000447557 929 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
NCK1P16333 COX6CP18-201ENST00000448769 222 ntBASIC3.04□□□□□ -1.92
NCK1P16333 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC3.04□□□□□ -1.92
NCK1P16333 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC3.04□□□□□ -1.92
NCK1P16333 RPL23AP31-201ENST00000456160 467 ntBASIC3.04□□□□□ -1.92
NCK1P16333 RN7SL283P-201ENST00000489055 303 ntBASIC3.04□□□□□ -1.92
NCK1P16333 INPP4B-206ENST00000506217 673 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
NCK1P16333 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC3.04□□□□□ -1.92
NCK1P16333 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC3.04□□□□□ -1.92
NCK1P16333 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC3.04□□□□□ -1.92
NCK1P16333 ARL6IP1P1-201ENST00000545836 610 ntBASIC3.04□□□□□ -1.92
NCK1P16333 AC087897.1-201ENST00000550134 156 ntBASIC3.04□□□□□ -1.92
NCK1P16333 SETP7-201ENST00000552169 453 ntBASIC3.04□□□□□ -1.92
NCK1P16333 MEG8-215ENST00000555354 469 ntTSL 3 BASIC3.04□□□□□ -1.92
NCK1P16333 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC3.04□□□□□ -1.92
NCK1P16333 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC3.04□□□□□ -1.92
NCK1P16333 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC3.04□□□□□ -1.92
NCK1P16333 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC3.04□□□□□ -1.92
NCK1P16333 AC022916.3-201ENST00000592961 742 ntBASIC3.04□□□□□ -1.92
NCK1P16333 BNIP3P24-201ENST00000593398 557 ntBASIC3.04□□□□□ -1.92
NCK1P16333 VN1R85P-201ENST00000601587 426 ntBASIC3.04□□□□□ -1.92
NCK1P16333 MIR7851-201ENST00000610611 160 ntBASIC3.04□□□□□ -1.92
NCK1P16333 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC3.04□□□□□ -1.92
NCK1P16333 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.04□□□□□ -1.92
NCK1P16333 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
NCK1P16333 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 108.4 ms