Protein–RNA interactions for Protein: P13378

HOXD8, Homeobox protein Hox-D8, humanhuman

Predicted RBP Predictions only

Length 290 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD8P13378 BX323014.1-201ENST00000412876 237 ntBASIC5.74□□□□□ -1.49
HOXD8P13378 MCFD2P1-201ENST00000417812 300 ntBASIC5.74□□□□□ -1.49
HOXD8P13378 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC5.74□□□□□ -1.49
HOXD8P13378 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC5.74□□□□□ -1.49
HOXD8P13378 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC5.74□□□□□ -1.49
HOXD8P13378 REG1CP-206ENST00000447469 496 ntBASIC5.74□□□□□ -1.49
HOXD8P13378 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC5.74□□□□□ -1.49
HOXD8P13378 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC5.74□□□□□ -1.49
HOXD8P13378 U8.20-201ENST00000459445 131 ntBASIC5.74□□□□□ -1.49
HOXD8P13378 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC5.74□□□□□ -1.49
HOXD8P13378 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC5.74□□□□□ -1.49
HOXD8P13378 AC017037.2-201ENST00000513850 890 ntBASIC5.74□□□□□ -1.49
HOXD8P13378 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC5.74□□□□□ -1.49
HOXD8P13378 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC5.74□□□□□ -1.49
HOXD8P13378 AC021006.3-201ENST00000530771 192 ntBASIC5.74□□□□□ -1.49
HOXD8P13378 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC5.74□□□□□ -1.49
HOXD8P13378 AC025857.2-201ENST00000602711 238 ntBASIC5.74□□□□□ -1.49
HOXD8P13378 AC105254.2-201ENST00000603636 436 ntBASIC5.74□□□□□ -1.49
HOXD8P13378 Z82243.1-201ENST00000609432 473 ntBASIC5.74□□□□□ -1.49
HOXD8P13378 AL596245.1-201ENST00000618994 362 ntBASIC5.74□□□□□ -1.49
HOXD8P13378 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC5.74□□□□□ -1.49
HOXD8P13378 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
HOXD8P13378 FRMD7-202ENST00000370879 2864 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
HOXD8P13378 FTO-204ENST00000463855 3056 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
HOXD8P13378 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
HOXD8P13378 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
HOXD8P13378 ZNF23-207ENST00000564528 3020 ntAPPRIS ALT2 TSL 2 BASIC5.74□□□□□ -1.49
HOXD8P13378 AC130650.2-201ENST00000618736 2403 ntBASIC5.74□□□□□ -1.49
HOXD8P13378 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
HOXD8P13378 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC5.73□□□□□ -1.49
HOXD8P13378 AC138907.8-201ENST00000623981 2256 ntBASIC5.73□□□□□ -1.49
HOXD8P13378 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC5.73□□□□□ -1.49
HOXD8P13378 GLYATL1-201ENST00000300079 2068 ntAPPRIS P3 TSL 2 BASIC5.73□□□□□ -1.49
HOXD8P13378 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
HOXD8P13378 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
HOXD8P13378 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
HOXD8P13378 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
HOXD8P13378 ANK2-226ENST00000612754 6134 ntTSL 5 BASIC5.73□□□□□ -1.49
HOXD8P13378 MFSD8-216ENST00000641147 4009 ntBASIC5.73□□□□□ -1.49
HOXD8P13378 RNU6-784P-201ENST00000384330 106 ntBASIC5.73□□□□□ -1.49
HOXD8P13378 Y_RNA.527-201ENST00000384573 102 ntBASIC5.73□□□□□ -1.49
HOXD8P13378 MT-TG-201ENST00000387429 68 ntBASIC5.73□□□□□ -1.49
HOXD8P13378 SSXP10-201ENST00000402595 565 ntBASIC5.73□□□□□ -1.49
HOXD8P13378 RN7SKP17-201ENST00000411242 351 ntBASIC5.73□□□□□ -1.49
HOXD8P13378 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC5.73□□□□□ -1.49
HOXD8P13378 OR2AS1P-201ENST00000427827 319 ntBASIC5.73□□□□□ -1.49
HOXD8P13378 AC096644.2-201ENST00000429278 159 ntBASIC5.73□□□□□ -1.49
HOXD8P13378 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC5.73□□□□□ -1.49
HOXD8P13378 RPL12P25-201ENST00000455592 494 ntBASIC5.73□□□□□ -1.49
HOXD8P13378 AP001992.1-205ENST00000462248 379 ntBASIC5.73□□□□□ -1.49
HOXD8P13378 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC5.73□□□□□ -1.49
HOXD8P13378 AC022133.1-201ENST00000490961 571 ntBASIC5.73□□□□□ -1.49
HOXD8P13378 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC5.73□□□□□ -1.49
HOXD8P13378 AC068305.1-201ENST00000497406 726 ntBASIC5.73□□□□□ -1.49
HOXD8P13378 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC5.73□□□□□ -1.49
HOXD8P13378 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC5.73□□□□□ -1.49
HOXD8P13378 SNORA25.10-201ENST00000515926 124 ntBASIC5.73□□□□□ -1.49
HOXD8P13378 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC5.73□□□□□ -1.49
HOXD8P13378 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC5.73□□□□□ -1.49
HOXD8P13378 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC5.73□□□□□ -1.49
HOXD8P13378 MIR5583-1-201ENST00000580941 59 ntBASIC5.73□□□□□ -1.49
HOXD8P13378 BNIP3P16-201ENST00000589779 534 ntBASIC5.73□□□□□ -1.49
HOXD8P13378 GMFG-202ENST00000594700 397 ntTSL 2 BASIC5.73□□□□□ -1.49
HOXD8P13378 AC073539.2-201ENST00000597113 165 ntBASIC5.73□□□□□ -1.49
HOXD8P13378 AC103710.2-201ENST00000609912 942 ntBASIC5.73□□□□□ -1.49
HOXD8P13378 uc_338.11-201ENST00000619132 160 ntBASIC5.73□□□□□ -1.49
HOXD8P13378 HELZ-207ENST00000580168 6279 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
HOXD8P13378 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC5.73□□□□□ -1.49
HOXD8P13378 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
HOXD8P13378 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
HOXD8P13378 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
HOXD8P13378 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
HOXD8P13378 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC5.73□□□□□ -1.49
HOXD8P13378 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
HOXD8P13378 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC5.73□□□□□ -1.49
HOXD8P13378 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
HOXD8P13378 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
HOXD8P13378 TCF4-268ENST00000629387 3789 ntAPPRIS ALT1 TSL 5 BASIC5.72□□□□□ -1.49
HOXD8P13378 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC5.72□□□□□ -1.49
HOXD8P13378 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC5.72□□□□□ -1.49
HOXD8P13378 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC5.72□□□□□ -1.49
HOXD8P13378 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC5.72□□□□□ -1.49
HOXD8P13378 LINC01422-201ENST00000434868 6043 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
HOXD8P13378 FBXO9-201ENST00000244426 4559 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
HOXD8P13378 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC5.72□□□□□ -1.49
HOXD8P13378 AL139276.1-201ENST00000311910 1001 ntBASIC5.72□□□□□ -1.49
HOXD8P13378 RN7SKP186-201ENST00000365371 303 ntBASIC5.72□□□□□ -1.49
HOXD8P13378 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
HOXD8P13378 SNORD3H-201ENST00000384486 214 ntBASIC5.72□□□□□ -1.49
HOXD8P13378 MIR19A-201ENST00000384878 82 ntBASIC5.72□□□□□ -1.49
HOXD8P13378 MIR92A2-201ENST00000385299 75 ntBASIC5.72□□□□□ -1.49
HOXD8P13378 CYB5AP4-201ENST00000396692 399 ntBASIC5.72□□□□□ -1.49
HOXD8P13378 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC5.72□□□□□ -1.49
HOXD8P13378 AC114482.1-201ENST00000418010 247 ntBASIC5.72□□□□□ -1.49
HOXD8P13378 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC5.72□□□□□ -1.49
HOXD8P13378 AC099670.2-201ENST00000435130 321 ntBASIC5.72□□□□□ -1.49
HOXD8P13378 AC090804.1-201ENST00000448870 490 ntBASIC5.72□□□□□ -1.49
HOXD8P13378 AC022431.1-201ENST00000450941 438 ntBASIC5.72□□□□□ -1.49
HOXD8P13378 AC104073.1-201ENST00000451988 151 ntBASIC5.72□□□□□ -1.49
HOXD8P13378 AC079804.1-201ENST00000461922 436 ntBASIC5.72□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 120.3 ms