Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC2.64□□□□□ -1.99
COL11A1P12107 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC2.64□□□□□ -1.99
COL11A1P12107 LINC01578-206ENST00000555520 977 ntTSL 3 BASIC2.64□□□□□ -1.99
COL11A1P12107 AC044913.1-201ENST00000557200 430 ntBASIC2.64□□□□□ -1.99
COL11A1P12107 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
COL11A1P12107 NTAN1P1-201ENST00000603150 646 ntBASIC2.64□□□□□ -1.99
COL11A1P12107 MIR1291-201ENST00000627649 87 ntBASIC2.64□□□□□ -1.99
COL11A1P12107 CFTRP2-201ENST00000634304 199 ntBASIC2.64□□□□□ -1.99
COL11A1P12107 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
COL11A1P12107 FRG1BP-201ENST00000278882 761 ntBASIC2.63□□□□□ -1.99
COL11A1P12107 RNU1-73P-201ENST00000383971 164 ntBASIC2.63□□□□□ -1.99
COL11A1P12107 RNU6-328P-201ENST00000390887 106 ntBASIC2.63□□□□□ -1.99
COL11A1P12107 RNU6-482P-201ENST00000391068 107 ntBASIC2.63□□□□□ -1.99
COL11A1P12107 Z98742.2-201ENST00000431564 187 ntBASIC2.63□□□□□ -1.99
COL11A1P12107 MUPP-201ENST00000438111 566 ntBASIC2.63□□□□□ -1.99
COL11A1P12107 HMGB3P21-201ENST00000452483 547 ntBASIC2.63□□□□□ -1.99
COL11A1P12107 FAM172BP-201ENST00000487497 1089 ntBASIC2.63□□□□□ -1.99
COL11A1P12107 AL024509.2-201ENST00000493462 493 ntBASIC2.63□□□□□ -1.99
COL11A1P12107 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC2.63□□□□□ -1.99
COL11A1P12107 AC019227.1-201ENST00000526902 510 ntBASIC2.63□□□□□ -1.99
COL11A1P12107 EIF4EP5-201ENST00000528228 640 ntBASIC2.63□□□□□ -1.99
COL11A1P12107 C11orf65-206ENST00000529391 973 ntAPPRIS P1 TSL 2 BASIC2.63□□□□□ -1.99
COL11A1P12107 AC123904.3-201ENST00000547218 814 ntBASIC2.63□□□□□ -1.99
COL11A1P12107 AC007906.1-201ENST00000568648 510 ntTSL 5 BASIC2.63□□□□□ -1.99
COL11A1P12107 BX664608.1-201ENST00000610519 487 ntBASIC2.63□□□□□ -1.99
COL11A1P12107 AL354950.1-201ENST00000614150 568 ntBASIC2.63□□□□□ -1.99
COL11A1P12107 AC002076.2-201ENST00000617362 122 ntBASIC2.63□□□□□ -1.99
COL11A1P12107 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
COL11A1P12107 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.63□□□□□ -1.99
COL11A1P12107 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC2.63□□□□□ -1.99
COL11A1P12107 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
COL11A1P12107 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC2.63□□□□□ -1.99
COL11A1P12107 IL20-201ENST00000367096 925 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
COL11A1P12107 RNU6-76P-201ENST00000384060 104 ntBASIC2.63□□□□□ -1.99
COL11A1P12107 AL139156.1-201ENST00000412785 841 ntBASIC2.63□□□□□ -1.99
COL11A1P12107 HMGB1P11-201ENST00000413899 637 ntBASIC2.63□□□□□ -1.99
COL11A1P12107 RPL31P45-201ENST00000419532 356 ntBASIC2.63□□□□□ -1.99
COL11A1P12107 AC011816.1-201ENST00000441346 546 ntBASIC2.63□□□□□ -1.99
COL11A1P12107 VN1R96P-201ENST00000446052 858 ntBASIC2.63□□□□□ -1.99
COL11A1P12107 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC2.63□□□□□ -1.99
COL11A1P12107 LINC02430-201ENST00000504755 476 ntTSL 3 BASIC2.63□□□□□ -1.99
COL11A1P12107 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.63□□□□□ -1.99
COL11A1P12107 MTERF3-205ENST00000524341 776 ntTSL 3 BASIC2.63□□□□□ -1.99
COL11A1P12107 HIGD1AP10-201ENST00000527837 282 ntBASIC2.63□□□□□ -1.99
COL11A1P12107 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC2.63□□□□□ -1.99
COL11A1P12107 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
COL11A1P12107 AC009318.2-201ENST00000610917 651 ntBASIC2.63□□□□□ -1.99
COL11A1P12107 CR589904.2-201ENST00000612533 440 ntBASIC2.63□□□□□ -1.99
COL11A1P12107 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC2.63□□□□□ -1.99
COL11A1P12107 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC2.62□□□□□ -1.99
COL11A1P12107 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC2.62□□□□□ -1.99
COL11A1P12107 AL591416.1-201ENST00000404015 867 ntBASIC2.62□□□□□ -1.99
COL11A1P12107 LINC01614-201ENST00000415479 648 ntTSL 2 BASIC2.62□□□□□ -1.99
COL11A1P12107 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC2.62□□□□□ -1.99
COL11A1P12107 CASP3P1-201ENST00000446037 609 ntBASIC2.62□□□□□ -1.99
COL11A1P12107 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC2.62□□□□□ -1.99
COL11A1P12107 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC2.62□□□□□ -1.99
COL11A1P12107 RN7SL499P-201ENST00000481141 276 ntBASIC2.62□□□□□ -1.99
COL11A1P12107 AC104090.1-201ENST00000506341 1171 ntBASIC2.62□□□□□ -1.99
COL11A1P12107 AC006063.1-201ENST00000512511 560 ntTSL 4 BASIC2.62□□□□□ -1.99
COL11A1P12107 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC2.62□□□□□ -1.99
COL11A1P12107 AL355432.1-201ENST00000522960 564 ntTSL 3 BASIC2.62□□□□□ -1.99
COL11A1P12107 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC2.62□□□□□ -1.99
COL11A1P12107 AC006116.7-201ENST00000590141 756 ntBASIC2.62□□□□□ -1.99
COL11A1P12107 AC103710.2-201ENST00000609912 942 ntBASIC2.62□□□□□ -1.99
COL11A1P12107 5S_rRNA.12-201ENST00000617631 107 ntBASIC2.62□□□□□ -1.99
COL11A1P12107 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
COL11A1P12107 AC145207.9-201ENST00000623802 325 ntBASIC2.62□□□□□ -1.99
COL11A1P12107 AC103798.2-201ENST00000624292 632 ntBASIC2.62□□□□□ -1.99
COL11A1P12107 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
COL11A1P12107 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
COL11A1P12107 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC2.62□□□□□ -1.99
COL11A1P12107 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC2.62□□□□□ -1.99
COL11A1P12107 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.62□□□□□ -1.99
COL11A1P12107 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC2.62□□□□□ -1.99
COL11A1P12107 ZNF355P-201ENST00000427301 3216 ntBASIC2.62□□□□□ -1.99
COL11A1P12107 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
COL11A1P12107 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
COL11A1P12107 Y_RNA.62-201ENST00000362840 99 ntBASIC2.61□□□□□ -1.99
COL11A1P12107 DEFB135-201ENST00000382208 234 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
COL11A1P12107 AL079342.1-201ENST00000401460 267 ntBASIC2.61□□□□□ -1.99
COL11A1P12107 SAR1AP4-201ENST00000429225 591 ntBASIC2.61□□□□□ -1.99
COL11A1P12107 TH2LCRR-202ENST00000435042 472 ntTSL 5 BASIC2.61□□□□□ -1.99
COL11A1P12107 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC2.61□□□□□ -1.99
COL11A1P12107 LAMTOR5P1-201ENST00000444290 270 ntBASIC2.61□□□□□ -1.99
COL11A1P12107 AL645939.1-201ENST00000453429 797 ntBASIC2.61□□□□□ -1.99
COL11A1P12107 RPS4XP6-201ENST00000477670 797 ntBASIC2.61□□□□□ -1.99
COL11A1P12107 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC2.61□□□□□ -1.99
COL11A1P12107 AC022616.2-201ENST00000523185 300 ntBASIC2.61□□□□□ -1.99
COL11A1P12107 AC007536.1-201ENST00000533382 349 ntBASIC2.61□□□□□ -1.99
COL11A1P12107 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC2.61□□□□□ -1.99
COL11A1P12107 AC010680.4-201ENST00000605334 543 ntBASIC2.61□□□□□ -1.99
COL11A1P12107 AC073348.1-201ENST00000623002 331 ntBASIC2.61□□□□□ -1.99
COL11A1P12107 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC2.61□□□□□ -1.99
COL11A1P12107 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
COL11A1P12107 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
COL11A1P12107 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
COL11A1P12107 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
COL11A1P12107 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC2.61□□□□□ -1.99
COL11A1P12107 GSTA9P-201ENST00000406231 611 ntBASIC2.61□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 89.9 ms