Protein–RNA interactions for Protein: P12035

KRT3, Keratin, type II cytoskeletal 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT3P12035 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
KRT3P12035 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
KRT3P12035 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.61□□□□□ -1.83
KRT3P12035 AC130650.2-201ENST00000618736 2403 ntBASIC3.61□□□□□ -1.83
KRT3P12035 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.61□□□□□ -1.83
KRT3P12035 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC3.6□□□□□ -1.83
KRT3P12035 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
KRT3P12035 PCF11-AS1-201ENST00000602322 1516 ntBASIC3.6□□□□□ -1.83
KRT3P12035 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
KRT3P12035 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.6□□□□□ -1.83
KRT3P12035 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
KRT3P12035 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
KRT3P12035 MIR30E-201ENST00000362104 92 ntBASIC3.6□□□□□ -1.83
KRT3P12035 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
KRT3P12035 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
KRT3P12035 MIR218-2-201ENST00000385006 110 ntBASIC3.6□□□□□ -1.83
KRT3P12035 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.6□□□□□ -1.83
KRT3P12035 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
KRT3P12035 AIMP1P1-201ENST00000418670 937 ntBASIC3.6□□□□□ -1.83
KRT3P12035 MTCYBP24-201ENST00000420387 1106 ntBASIC3.6□□□□□ -1.83
KRT3P12035 AL513174.1-201ENST00000423182 629 ntBASIC3.6□□□□□ -1.83
KRT3P12035 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC3.6□□□□□ -1.83
KRT3P12035 LAMTOR3P1-201ENST00000428620 370 ntBASIC3.6□□□□□ -1.83
KRT3P12035 ATP5F1P1-201ENST00000433775 569 ntBASIC3.6□□□□□ -1.83
KRT3P12035 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC3.6□□□□□ -1.83
KRT3P12035 Z80107.1-201ENST00000436830 412 ntBASIC3.6□□□□□ -1.83
KRT3P12035 HMGB1P12-201ENST00000438594 598 ntBASIC3.6□□□□□ -1.83
KRT3P12035 AC127537.2-201ENST00000439258 465 ntBASIC3.6□□□□□ -1.83
KRT3P12035 AC122718.1-201ENST00000439448 744 ntBASIC3.6□□□□□ -1.83
KRT3P12035 RNF148-202ENST00000447240 839 ntTSL 2 BASIC3.6□□□□□ -1.83
KRT3P12035 MRPS31P2-201ENST00000451581 518 ntBASIC3.6□□□□□ -1.83
KRT3P12035 AC097262.1-201ENST00000452559 548 ntBASIC3.6□□□□□ -1.83
KRT3P12035 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC3.6□□□□□ -1.83
KRT3P12035 AC092754.2-201ENST00000463506 460 ntBASIC3.6□□□□□ -1.83
KRT3P12035 FAM133DP-201ENST00000464802 691 ntBASIC3.6□□□□□ -1.83
KRT3P12035 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
KRT3P12035 AC025518.1-201ENST00000479856 347 ntBASIC3.6□□□□□ -1.83
KRT3P12035 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC3.6□□□□□ -1.83
KRT3P12035 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC3.6□□□□□ -1.83
KRT3P12035 MTCYBP16-201ENST00000509187 1129 ntBASIC3.6□□□□□ -1.83
KRT3P12035 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC3.6□□□□□ -1.83
KRT3P12035 AC026412.2-201ENST00000512270 1075 ntBASIC3.6□□□□□ -1.83
KRT3P12035 AC110760.3-202ENST00000515177 371 ntBASIC3.6□□□□□ -1.83
KRT3P12035 RN7SKP116-201ENST00000516902 319 ntBASIC3.6□□□□□ -1.83
KRT3P12035 AC107934.2-201ENST00000518653 310 ntBASIC3.6□□□□□ -1.83
KRT3P12035 OR5B10P-201ENST00000532869 642 ntBASIC3.6□□□□□ -1.83
KRT3P12035 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.6□□□□□ -1.83
KRT3P12035 AC005832.3-201ENST00000537929 631 ntBASIC3.6□□□□□ -1.83
KRT3P12035 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC3.6□□□□□ -1.83
KRT3P12035 BNIP3P26-201ENST00000600827 554 ntBASIC3.6□□□□□ -1.83
KRT3P12035 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC3.6□□□□□ -1.83
KRT3P12035 DUXAP3-201ENST00000603616 594 ntBASIC3.6□□□□□ -1.83
KRT3P12035 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC3.6□□□□□ -1.83
KRT3P12035 AL365503.1-201ENST00000605247 905 ntBASIC3.6□□□□□ -1.83
KRT3P12035 AC008083.4-201ENST00000615076 444 ntBASIC3.6□□□□□ -1.83
KRT3P12035 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.6□□□□□ -1.83
KRT3P12035 AL161637.1-201ENST00000622380 412 ntBASIC3.6□□□□□ -1.83
KRT3P12035 AP001002.2-201ENST00000625137 386 ntBASIC3.6□□□□□ -1.83
KRT3P12035 AC090897.3-201ENST00000636973 1157 ntBASIC3.6□□□□□ -1.83
KRT3P12035 AC244258.1-201ENST00000637553 1071 ntBASIC3.6□□□□□ -1.83
KRT3P12035 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC3.6□□□□□ -1.83
KRT3P12035 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
KRT3P12035 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
KRT3P12035 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
KRT3P12035 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
KRT3P12035 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.6□□□□□ -1.83
KRT3P12035 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.6□□□□□ -1.83
KRT3P12035 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
KRT3P12035 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.59□□□□□ -1.83
KRT3P12035 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
KRT3P12035 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
KRT3P12035 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
KRT3P12035 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
KRT3P12035 Y_RNA.408-201ENST00000383987 102 ntBASIC3.59□□□□□ -1.83
KRT3P12035 SNORA51.6-201ENST00000384151 125 ntBASIC3.59□□□□□ -1.83
KRT3P12035 SNORD17-201ENST00000390930 237 ntBASIC3.59□□□□□ -1.83
KRT3P12035 ANAPC10P1-201ENST00000395991 556 ntBASIC3.59□□□□□ -1.83
KRT3P12035 PTMAP2-201ENST00000397627 327 ntBASIC3.59□□□□□ -1.83
KRT3P12035 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC3.59□□□□□ -1.83
KRT3P12035 AL121972.1-201ENST00000402023 252 ntBASIC3.59□□□□□ -1.83
KRT3P12035 SNX10-203ENST00000409367 746 ntTSL 5 BASIC3.59□□□□□ -1.83
KRT3P12035 RN7SKP111-201ENST00000410349 271 ntBASIC3.59□□□□□ -1.83
KRT3P12035 RNU6-55P-201ENST00000411092 107 ntBASIC3.59□□□□□ -1.83
KRT3P12035 RNU6-954P-201ENST00000411355 107 ntBASIC3.59□□□□□ -1.83
KRT3P12035 Z99755.1-201ENST00000414048 380 ntBASIC3.59□□□□□ -1.83
KRT3P12035 AL592310.1-201ENST00000414330 671 ntBASIC3.59□□□□□ -1.83
KRT3P12035 RPL31P12-201ENST00000422587 358 ntBASIC3.59□□□□□ -1.83
KRT3P12035 ZDHHC20P2-201ENST00000424108 429 ntBASIC3.59□□□□□ -1.83
KRT3P12035 RPL7P44-201ENST00000424827 742 ntBASIC3.59□□□□□ -1.83
KRT3P12035 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC3.59□□□□□ -1.83
KRT3P12035 GOT2P5-201ENST00000433995 546 ntBASIC3.59□□□□□ -1.83
KRT3P12035 AC092427.1-201ENST00000439177 601 ntBASIC3.59□□□□□ -1.83
KRT3P12035 AC092641.1-201ENST00000440229 772 ntBASIC3.59□□□□□ -1.83
KRT3P12035 AC008264.1-201ENST00000447612 367 ntBASIC3.59□□□□□ -1.83
KRT3P12035 HMGN2P16-201ENST00000456802 261 ntBASIC3.59□□□□□ -1.83
KRT3P12035 RPS4XP2-201ENST00000458402 793 ntBASIC3.59□□□□□ -1.83
KRT3P12035 MTND1P16-201ENST00000465177 898 ntBASIC3.59□□□□□ -1.83
KRT3P12035 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC3.59□□□□□ -1.83
KRT3P12035 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC3.59□□□□□ -1.83
KRT3P12035 AC108078.3-201ENST00000502633 489 ntBASIC3.59□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 101 ms