Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
TOP2AP11388 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
TOP2AP11388 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
TOP2AP11388 THUMPD3P1-201ENST00000506556 1480 ntBASIC3.73□□□□□ -1.81
TOP2AP11388 RNU6-1159P-201ENST00000362933 107 ntBASIC3.73□□□□□ -1.81
TOP2AP11388 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
TOP2AP11388 RNU2-22P-201ENST00000411266 212 ntBASIC3.73□□□□□ -1.81
TOP2AP11388 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC3.73□□□□□ -1.81
TOP2AP11388 AC004866.2-201ENST00000438285 481 ntBASIC3.73□□□□□ -1.81
TOP2AP11388 RPL23AP44-201ENST00000482216 473 ntBASIC3.73□□□□□ -1.81
TOP2AP11388 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC3.73□□□□□ -1.81
TOP2AP11388 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC3.73□□□□□ -1.81
TOP2AP11388 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC3.73□□□□□ -1.81
TOP2AP11388 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.73□□□□□ -1.81
TOP2AP11388 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC3.73□□□□□ -1.81
TOP2AP11388 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC3.73□□□□□ -1.81
TOP2AP11388 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC3.72□□□□□ -1.81
TOP2AP11388 SNORA17.3-201ENST00000391159 129 ntBASIC3.72□□□□□ -1.81
TOP2AP11388 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC3.72□□□□□ -1.81
TOP2AP11388 AC092185.1-201ENST00000491371 97 ntBASIC3.72□□□□□ -1.81
TOP2AP11388 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC3.72□□□□□ -1.81
TOP2AP11388 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC3.72□□□□□ -1.81
TOP2AP11388 AC006254.3-201ENST00000603353 884 ntBASIC3.72□□□□□ -1.81
TOP2AP11388 YWHAEP7-203ENST00000622054 312 ntBASIC3.72□□□□□ -1.81
TOP2AP11388 VPS8-228ENST00000628962 207 ntTSL 5 BASIC3.72□□□□□ -1.81
TOP2AP11388 EXOC5P1-201ENST00000510543 1969 ntBASIC3.72□□□□□ -1.81
TOP2AP11388 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.72□□□□□ -1.81
TOP2AP11388 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.81
TOP2AP11388 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC3.71□□□□□ -1.81
TOP2AP11388 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.71□□□□□ -1.81
TOP2AP11388 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.81
TOP2AP11388 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
TOP2AP11388 SNORA26.9-201ENST00000391322 122 ntBASIC3.71□□□□□ -1.82
TOP2AP11388 RBM6-203ENST00000421682 684 ntTSL 2 BASIC3.71□□□□□ -1.82
TOP2AP11388 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC3.71□□□□□ -1.82
TOP2AP11388 RPL38P4-201ENST00000502376 214 ntBASIC3.71□□□□□ -1.82
TOP2AP11388 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC3.71□□□□□ -1.82
TOP2AP11388 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC3.71□□□□□ -1.82
TOP2AP11388 AC044913.1-201ENST00000557200 430 ntBASIC3.71□□□□□ -1.82
TOP2AP11388 AC013562.2-201ENST00000611632 603 ntBASIC3.71□□□□□ -1.82
TOP2AP11388 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
TOP2AP11388 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC3.71□□□□□ -1.82
TOP2AP11388 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC3.71□□□□□ -1.82
TOP2AP11388 AC093010.3-201ENST00000570269 15214 ntBASIC3.71□□□□□ -1.82
TOP2AP11388 MTND4P35-201ENST00000604257 1375 ntBASIC3.71□□□□□ -1.82
TOP2AP11388 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC3.71□□□□□ -1.82
TOP2AP11388 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC3.7□□□□□ -1.82
TOP2AP11388 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC3.7□□□□□ -1.82
TOP2AP11388 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC3.7□□□□□ -1.82
TOP2AP11388 RN7SKP282-201ENST00000516824 299 ntBASIC3.7□□□□□ -1.82
TOP2AP11388 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC3.7□□□□□ -1.82
TOP2AP11388 AC092184.1-201ENST00000625042 715 ntBASIC3.7□□□□□ -1.82
TOP2AP11388 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC3.7□□□□□ -1.82
TOP2AP11388 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
TOP2AP11388 AC093775.1-201ENST00000624154 1868 ntBASIC3.7□□□□□ -1.82
TOP2AP11388 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC3.7□□□□□ -1.82
TOP2AP11388 OR4G2P-202ENST00000641004 1759 ntBASIC3.7□□□□□ -1.82
TOP2AP11388 RNU1-51P-201ENST00000365345 176 ntBASIC3.7□□□□□ -1.82
TOP2AP11388 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.7□□□□□ -1.82
TOP2AP11388 AIMP1P1-201ENST00000418670 937 ntBASIC3.7□□□□□ -1.82
TOP2AP11388 AC117522.2-201ENST00000510049 657 ntBASIC3.7□□□□□ -1.82
TOP2AP11388 AC093331.1-201ENST00000521474 169 ntBASIC3.7□□□□□ -1.82
TOP2AP11388 AC025260.1-201ENST00000548858 430 ntBASIC3.7□□□□□ -1.82
TOP2AP11388 PSMG2-204ENST00000585331 983 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
TOP2AP11388 TPMTP1-201ENST00000592307 737 ntBASIC3.7□□□□□ -1.82
TOP2AP11388 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
TOP2AP11388 AL353997.5-201ENST00000618886 171 ntBASIC3.7□□□□□ -1.82
TOP2AP11388 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.69□□□□□ -1.82
TOP2AP11388 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC3.69□□□□□ -1.82
TOP2AP11388 AC098798.1-201ENST00000503998 1447 ntTSL 5 BASIC3.69□□□□□ -1.82
TOP2AP11388 CEACAMP4-201ENST00000457676 421 ntBASIC3.69□□□□□ -1.82
TOP2AP11388 AC011494.1-201ENST00000596454 237 ntBASIC3.69□□□□□ -1.82
TOP2AP11388 CDC27P2-201ENST00000425026 1922 ntBASIC3.68□□□□□ -1.82
TOP2AP11388 AL359893.1-201ENST00000447628 1580 ntBASIC3.68□□□□□ -1.82
TOP2AP11388 MIR6073-201ENST00000352083 89 ntBASIC3.68□□□□□ -1.82
TOP2AP11388 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC3.68□□□□□ -1.82
TOP2AP11388 CYCSP49-201ENST00000420810 319 ntBASIC3.68□□□□□ -1.82
TOP2AP11388 RWDD4P2-201ENST00000426392 563 ntBASIC3.68□□□□□ -1.82
TOP2AP11388 RWDD4P1-201ENST00000488019 565 ntBASIC3.68□□□□□ -1.82
TOP2AP11388 OR4H12P-201ENST00000556269 907 ntBASIC3.68□□□□□ -1.82
TOP2AP11388 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
TOP2AP11388 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC3.67□□□□□ -1.82
TOP2AP11388 AMZ2P1-203ENST00000565833 850 ntBASIC3.67□□□□□ -1.82
TOP2AP11388 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC3.67□□□□□ -1.82
TOP2AP11388 AGL-204ENST00000370161 6923 ntTSL 5 BASIC3.67□□□□□ -1.82
TOP2AP11388 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
TOP2AP11388 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
TOP2AP11388 SNORD6-201ENST00000365444 73 ntBASIC3.66□□□□□ -1.82
TOP2AP11388 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC3.66□□□□□ -1.82
TOP2AP11388 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC3.66□□□□□ -1.82
TOP2AP11388 AL035551.1-201ENST00000446931 348 ntBASIC3.66□□□□□ -1.82
TOP2AP11388 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC3.66□□□□□ -1.82
TOP2AP11388 NDUFB4P9-201ENST00000511646 388 ntBASIC3.66□□□□□ -1.82
TOP2AP11388 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC3.66□□□□□ -1.82
TOP2AP11388 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.66□□□□□ -1.82
TOP2AP11388 RNA5SP247-201ENST00000411181 105 ntBASIC3.65□□□□□ -1.82
TOP2AP11388 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC3.65□□□□□ -1.82
TOP2AP11388 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC3.65□□□□□ -1.82
TOP2AP11388 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
TOP2AP11388 SNORA62.2-201ENST00000364672 152 ntBASIC3.65□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 98 ms