Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC2.62□□□□□ -1.99
HLA-DQB2P05538 RNU1-101P-201ENST00000391171 127 ntBASIC2.62□□□□□ -1.99
HLA-DQB2P05538 AL139039.1-201ENST00000401900 692 ntBASIC2.62□□□□□ -1.99
HLA-DQB2P05538 PRRC2CP1-201ENST00000404428 159 ntBASIC2.62□□□□□ -1.99
HLA-DQB2P05538 HSFY1P1-201ENST00000423928 1178 ntBASIC2.62□□□□□ -1.99
HLA-DQB2P05538 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC2.62□□□□□ -1.99
HLA-DQB2P05538 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC2.62□□□□□ -1.99
HLA-DQB2P05538 AC019097.1-201ENST00000424783 735 ntBASIC2.62□□□□□ -1.99
HLA-DQB2P05538 LAMTOR5P1-201ENST00000444290 270 ntBASIC2.62□□□□□ -1.99
HLA-DQB2P05538 COX6CP2-201ENST00000444980 225 ntBASIC2.62□□□□□ -1.99
HLA-DQB2P05538 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC2.62□□□□□ -1.99
HLA-DQB2P05538 NF1P3-201ENST00000457709 450 ntBASIC2.62□□□□□ -1.99
HLA-DQB2P05538 RN7SL499P-201ENST00000481141 276 ntBASIC2.62□□□□□ -1.99
HLA-DQB2P05538 RAD51AP1P1-201ENST00000484195 1001 ntBASIC2.62□□□□□ -1.99
HLA-DQB2P05538 CFAP44-AS1-202ENST00000498480 686 ntTSL 3 BASIC2.62□□□□□ -1.99
HLA-DQB2P05538 AC006445.2-201ENST00000510061 472 ntBASIC2.62□□□□□ -1.99
HLA-DQB2P05538 AC096725.1-201ENST00000514266 313 ntBASIC2.62□□□□□ -1.99
HLA-DQB2P05538 SNORA31.26-201ENST00000517250 137 ntBASIC2.62□□□□□ -1.99
HLA-DQB2P05538 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC2.62□□□□□ -1.99
HLA-DQB2P05538 CKS1BP7-201ENST00000522230 235 ntBASIC2.62□□□□□ -1.99
HLA-DQB2P05538 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC2.62□□□□□ -1.99
HLA-DQB2P05538 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC2.62□□□□□ -1.99
HLA-DQB2P05538 OR7K1P-201ENST00000546439 926 ntBASIC2.62□□□□□ -1.99
HLA-DQB2P05538 AC242628.1-201ENST00000606810 391 ntBASIC2.62□□□□□ -1.99
HLA-DQB2P05538 BX664608.1-201ENST00000610519 487 ntBASIC2.62□□□□□ -1.99
HLA-DQB2P05538 NSRP1P1-201ENST00000444067 1693 ntBASIC2.62□□□□□ -1.99
HLA-DQB2P05538 AC093010.3-201ENST00000570269 15214 ntBASIC2.61□□□□□ -1.99
HLA-DQB2P05538 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC2.61□□□□□ -1.99
HLA-DQB2P05538 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
HLA-DQB2P05538 EFTUD1P2-201ENST00000514817 1603 ntBASIC2.61□□□□□ -1.99
HLA-DQB2P05538 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC2.61□□□□□ -1.99
HLA-DQB2P05538 METTL21EP-201ENST00000298105 713 ntBASIC2.61□□□□□ -1.99
HLA-DQB2P05538 SNORA5B-201ENST00000363786 132 ntBASIC2.61□□□□□ -1.99
HLA-DQB2P05538 RNU1-100P-201ENST00000365255 165 ntBASIC2.61□□□□□ -1.99
HLA-DQB2P05538 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC2.61□□□□□ -1.99
HLA-DQB2P05538 U3.26-201ENST00000391236 204 ntBASIC2.61□□□□□ -1.99
HLA-DQB2P05538 EIF5P1-201ENST00000400019 1231 ntBASIC2.61□□□□□ -1.99
HLA-DQB2P05538 CFLAR-AS1-201ENST00000415011 1072 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
HLA-DQB2P05538 LINC01347-201ENST00000417964 355 ntBASIC2.61□□□□□ -1.99
HLA-DQB2P05538 NUP35P1-201ENST00000422734 947 ntBASIC2.61□□□□□ -1.99
HLA-DQB2P05538 AC063976.3-201ENST00000426849 329 ntBASIC2.61□□□□□ -1.99
HLA-DQB2P05538 SETP8-201ENST00000435341 628 ntBASIC2.61□□□□□ -1.99
HLA-DQB2P05538 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC2.61□□□□□ -1.99
HLA-DQB2P05538 NFU1-207ENST00000462320 558 ntTSL 4 BASIC2.61□□□□□ -1.99
HLA-DQB2P05538 AP001486.1-201ENST00000463339 476 ntBASIC2.61□□□□□ -1.99
HLA-DQB2P05538 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC2.61□□□□□ -1.99
HLA-DQB2P05538 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC2.61□□□□□ -1.99
HLA-DQB2P05538 CD69-203ENST00000536709 1020 ntTSL 2 BASIC2.61□□□□□ -1.99
HLA-DQB2P05538 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC2.61□□□□□ -1.99
HLA-DQB2P05538 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC2.61□□□□□ -1.99
HLA-DQB2P05538 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC2.61□□□□□ -1.99
HLA-DQB2P05538 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC2.61□□□□□ -1.99
HLA-DQB2P05538 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC2.61□□□□□ -1.99
HLA-DQB2P05538 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC2.61□□□□□ -1.99
HLA-DQB2P05538 AC006023.2-201ENST00000609916 167 ntBASIC2.61□□□□□ -1.99
HLA-DQB2P05538 MEG8-222ENST00000637332 1237 ntTSL 5 BASIC2.61□□□□□ -1.99
HLA-DQB2P05538 ASAH1-263ENST00000637872 886 ntTSL 5 BASIC2.61□□□□□ -1.99
HLA-DQB2P05538 PABPC1P7-201ENST00000413177 1513 ntBASIC2.61□□□□□ -1.99
HLA-DQB2P05538 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC2.61□□□□□ -1.99
HLA-DQB2P05538 ZNF37BP-203ENST00000452306 1352 ntBASIC2.61□□□□□ -1.99
HLA-DQB2P05538 AC002546.1-201ENST00000588041 2504 ntBASIC2.61□□□□□ -1.99
HLA-DQB2P05538 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC2.6□□□□□ -1.99
HLA-DQB2P05538 AL365361.1-201ENST00000566942 3481 ntBASIC2.6□□□□□ -1.99
HLA-DQB2P05538 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC2.6□□□□□ -1.99
HLA-DQB2P05538 Z86062.1-201ENST00000406773 777 ntBASIC2.6□□□□□ -1.99
HLA-DQB2P05538 MIR1303-201ENST00000408625 86 ntBASIC2.6□□□□□ -1.99
HLA-DQB2P05538 RNA5SP184-201ENST00000411071 108 ntBASIC2.6□□□□□ -1.99
HLA-DQB2P05538 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC2.6□□□□□ -1.99
HLA-DQB2P05538 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC2.6□□□□□ -1.99
HLA-DQB2P05538 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC2.6□□□□□ -1.99
HLA-DQB2P05538 LAMTOR3P1-201ENST00000428620 370 ntBASIC2.6□□□□□ -1.99
HLA-DQB2P05538 MRPS33P4-201ENST00000434892 317 ntBASIC2.6□□□□□ -1.99
HLA-DQB2P05538 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC2.6□□□□□ -1.99
HLA-DQB2P05538 XKRYP6-201ENST00000440468 1116 ntBASIC2.6□□□□□ -1.99
HLA-DQB2P05538 XKRYP3-201ENST00000442113 1116 ntBASIC2.6□□□□□ -1.99
HLA-DQB2P05538 AL109933.2-201ENST00000452651 260 ntBASIC2.6□□□□□ -1.99
HLA-DQB2P05538 AC008280.2-201ENST00000455473 307 ntBASIC2.6□□□□□ -1.99
HLA-DQB2P05538 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC2.6□□□□□ -1.99
HLA-DQB2P05538 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC2.6□□□□□ -1.99
HLA-DQB2P05538 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC2.6□□□□□ -1.99
HLA-DQB2P05538 HMGB1P22-201ENST00000505315 124 ntBASIC2.6□□□□□ -1.99
HLA-DQB2P05538 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
HLA-DQB2P05538 AC124069.1-201ENST00000517454 735 ntTSL 3 BASIC2.6□□□□□ -1.99
HLA-DQB2P05538 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC2.6□□□□□ -1.99
HLA-DQB2P05538 AC104115.2-201ENST00000523026 687 ntBASIC2.6□□□□□ -1.99
HLA-DQB2P05538 HAUS1P3-201ENST00000523909 662 ntBASIC2.6□□□□□ -1.99
HLA-DQB2P05538 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC2.6□□□□□ -1.99
HLA-DQB2P05538 AC239860.2-201ENST00000525886 270 ntBASIC2.6□□□□□ -1.99
HLA-DQB2P05538 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC2.6□□□□□ -1.99
HLA-DQB2P05538 AC139103.1-201ENST00000534696 1030 ntBASIC2.6□□□□□ -1.99
HLA-DQB2P05538 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC2.6□□□□□ -1.99
HLA-DQB2P05538 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC2.6□□□□□ -1.99
HLA-DQB2P05538 AL109653.1-201ENST00000603091 248 ntBASIC2.6□□□□□ -1.99
HLA-DQB2P05538 AC022387.2-201ENST00000604050 448 ntBASIC2.6□□□□□ -1.99
HLA-DQB2P05538 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.6□□□□□ -1.99
HLA-DQB2P05538 AC087521.4-201ENST00000637427 289 ntTSL 5 BASIC2.6□□□□□ -1.99
HLA-DQB2P05538 AC092447.7-201ENST00000422212 1621 ntBASIC2.6□□□□□ -1.99
HLA-DQB2P05538 FAM35BP-202ENST00000497389 3337 ntBASIC2.6□□□□□ -1.99
HLA-DQB2P05538 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
HLA-DQB2P05538 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 96.1 ms