Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC1.38□□□□□ -2.19
APOBP04114 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC1.38□□□□□ -2.19
APOBP04114 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC1.38□□□□□ -2.19
APOBP04114 TTN-204ENST00000360870 18218 ntTSL 5 BASIC1.38□□□□□ -2.19
APOBP04114 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC1.38□□□□□ -2.19
APOBP04114 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC1.38□□□□□ -2.19
APOBP04114 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC1.38□□□□□ -2.19
APOBP04114 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC1.38□□□□□ -2.19
APOBP04114 FRG1BP-201ENST00000278882 761 ntBASIC1.38□□□□□ -2.19
APOBP04114 Y_RNA.122-201ENST00000363331 96 ntBASIC1.38□□□□□ -2.19
APOBP04114 SNORA25.6-201ENST00000364121 118 ntBASIC1.38□□□□□ -2.19
APOBP04114 RPL21P75-201ENST00000396599 483 ntBASIC1.38□□□□□ -2.19
APOBP04114 RPL31P1-201ENST00000398116 372 ntBASIC1.38□□□□□ -2.19
APOBP04114 RPL21P1-201ENST00000399532 476 ntBASIC1.38□□□□□ -2.19
APOBP04114 RPL21P28-201ENST00000401418 483 ntBASIC1.38□□□□□ -2.19
APOBP04114 AL592114.1-201ENST00000403842 483 ntBASIC1.38□□□□□ -2.19
APOBP04114 MTCO3P21-201ENST00000430791 643 ntBASIC1.38□□□□□ -2.19
APOBP04114 RPL21P16-201ENST00000495531 483 ntBASIC1.38□□□□□ -2.19
APOBP04114 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC1.38□□□□□ -2.19
APOBP04114 MIR5007-201ENST00000583098 95 ntBASIC1.38□□□□□ -2.19
APOBP04114 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC1.38□□□□□ -2.19
APOBP04114 EIF5P1-201ENST00000400019 1231 ntBASIC1.38□□□□□ -2.19
APOBP04114 CACYBPP1-201ENST00000438592 684 ntBASIC1.38□□□□□ -2.19
APOBP04114 AC004263.1-201ENST00000479327 332 ntBASIC1.38□□□□□ -2.19
APOBP04114 snoZ278.1-201ENST00000517059 112 ntBASIC1.38□□□□□ -2.19
APOBP04114 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.38□□□□□ -2.19
APOBP04114 MIR5092-201ENST00000583139 88 ntBASIC1.38□□□□□ -2.19
APOBP04114 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC1.38□□□□□ -2.19
APOBP04114 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
APOBP04114 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC1.38□□□□□ -2.19
APOBP04114 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.38□□□□□ -2.19
APOBP04114 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC1.37□□□□□ -2.19
APOBP04114 RNU6-392P-201ENST00000364926 101 ntBASIC1.37□□□□□ -2.19
APOBP04114 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC1.37□□□□□ -2.19
APOBP04114 RNA5SP129-201ENST00000410276 118 ntBASIC1.37□□□□□ -2.19
APOBP04114 GTPBP8-204ENST00000467752 686 ntTSL 5 BASIC1.37□□□□□ -2.19
APOBP04114 AC108078.2-201ENST00000510750 236 ntBASIC1.37□□□□□ -2.19
APOBP04114 CYP3A51P-201ENST00000633513 256 ntBASIC1.37□□□□□ -2.19
APOBP04114 CU459211.1-201ENST00000635667 749 ntBASIC1.37□□□□□ -2.19
APOBP04114 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC1.37□□□□□ -2.19
APOBP04114 XPOTP1-201ENST00000443317 2398 ntBASIC1.37□□□□□ -2.19
APOBP04114 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC1.37□□□□□ -2.19
APOBP04114 IL20-201ENST00000367096 925 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
APOBP04114 AC098826.1-201ENST00000433943 471 ntBASIC1.37□□□□□ -2.19
APOBP04114 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.37□□□□□ -2.19
APOBP04114 AP000790.1-201ENST00000528891 737 ntBASIC1.37□□□□□ -2.19
APOBP04114 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC1.37□□□□□ -2.19
APOBP04114 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC1.37□□□□□ -2.19
APOBP04114 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
APOBP04114 PROS2P-201ENST00000474651 1951 ntBASIC1.37□□□□□ -2.19
APOBP04114 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC1.37□□□□□ -2.19
APOBP04114 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC1.37□□□□□ -2.19
APOBP04114 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC1.37□□□□□ -2.19
APOBP04114 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC1.37□□□□□ -2.19
APOBP04114 IL6ST-204ENST00000381293 612 ntTSL 1 (best) BASIC1.37□□□□□ -2.19
APOBP04114 AC105137.2-201ENST00000569073 466 ntBASIC1.37□□□□□ -2.19
APOBP04114 MIR3199-1-201ENST00000582434 88 ntBASIC1.37□□□□□ -2.19
APOBP04114 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC1.37□□□□□ -2.19
APOBP04114 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC1.37□□□□□ -2.19
APOBP04114 PHKBP1-201ENST00000450951 1951 ntBASIC1.37□□□□□ -2.19
APOBP04114 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC1.37□□□□□ -2.19
APOBP04114 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
APOBP04114 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
APOBP04114 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC1.37□□□□□ -2.19
APOBP04114 RNY1P10-201ENST00000363268 113 ntBASIC1.37□□□□□ -2.19
APOBP04114 MTCO2P17-201ENST00000424336 677 ntBASIC1.37□□□□□ -2.19
APOBP04114 AC011753.1-201ENST00000451001 220 ntBASIC1.37□□□□□ -2.19
APOBP04114 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC1.37□□□□□ -2.19
APOBP04114 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC1.37□□□□□ -2.19
APOBP04114 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC1.37□□□□□ -2.19
APOBP04114 AC020895.1-201ENST00000595362 272 ntBASIC1.37□□□□□ -2.19
APOBP04114 AC245517.5-201ENST00000611529 162 ntBASIC1.37□□□□□ -2.19
APOBP04114 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC1.37□□□□□ -2.19
APOBP04114 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC1.37□□□□□ -2.19
APOBP04114 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
APOBP04114 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
APOBP04114 IFI16-205ENST00000368132 2704 ntAPPRIS ALT2 TSL 1 (best) BASIC1.36□□□□□ -2.19
APOBP04114 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC1.36□□□□□ -2.19
APOBP04114 RPL23AP58-201ENST00000440453 469 ntBASIC1.36□□□□□ -2.19
APOBP04114 snoU13.18-201ENST00000459483 104 ntBASIC1.36□□□□□ -2.19
APOBP04114 AF186190.1-201ENST00000517470 480 ntBASIC1.36□□□□□ -2.19
APOBP04114 AC055876.1-202ENST00000567053 138 ntBASIC1.36□□□□□ -2.19
APOBP04114 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC1.36□□□□□ -2.19
APOBP04114 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC1.36□□□□□ -2.19
APOBP04114 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC1.36□□□□□ -2.19
APOBP04114 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
APOBP04114 AC027514.1-201ENST00000588561 1603 ntBASIC1.36□□□□□ -2.19
APOBP04114 MIR337-201ENST00000362281 93 ntBASIC1.36□□□□□ -2.19
APOBP04114 SDCBPP3-201ENST00000419629 891 ntBASIC1.36□□□□□ -2.19
APOBP04114 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC1.36□□□□□ -2.19
APOBP04114 AC072039.1-201ENST00000477611 581 ntBASIC1.36□□□□□ -2.19
APOBP04114 NDUFA5P6-201ENST00000542110 379 ntBASIC1.36□□□□□ -2.19
APOBP04114 ARL2BPP2-201ENST00000550907 489 ntBASIC1.36□□□□□ -2.19
APOBP04114 Z82195.2-201ENST00000612348 18351 ntBASIC1.36□□□□□ -2.19
APOBP04114 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC1.36□□□□□ -2.19
APOBP04114 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
APOBP04114 AC002543.1-201ENST00000299783 1954 ntBASIC1.36□□□□□ -2.19
APOBP04114 RNU1-91P-201ENST00000364746 163 ntBASIC1.36□□□□□ -2.19
APOBP04114 AL354719.1-201ENST00000406535 843 ntBASIC1.36□□□□□ -2.19
APOBP04114 RNA5SP344-201ENST00000411081 104 ntBASIC1.36□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 129.2 ms