Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 AC074029.2-201ENST00000551045 634 ntBASIC2.91□□□□□ -1.94
APOEP02649 ELOCP29-201ENST00000588193 334 ntBASIC2.91□□□□□ -1.94
APOEP02649 AC023043.3-201ENST00000593113 385 ntBASIC2.91□□□□□ -1.94
APOEP02649 NTAN1P1-201ENST00000603150 646 ntBASIC2.91□□□□□ -1.94
APOEP02649 AC073387.2-201ENST00000604797 784 ntBASIC2.91□□□□□ -1.94
APOEP02649 AL590282.1-201ENST00000610379 1136 ntBASIC2.91□□□□□ -1.94
APOEP02649 GXYLT1P5-202ENST00000618830 589 ntTSL 5 BASIC2.91□□□□□ -1.94
APOEP02649 AC091046.2-201ENST00000620775 665 ntBASIC2.91□□□□□ -1.94
APOEP02649 PABPC1P7-201ENST00000413177 1513 ntBASIC2.91□□□□□ -1.94
APOEP02649 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.91□□□□□ -1.94
APOEP02649 ZNF33BP1-201ENST00000452497 1834 ntBASIC2.91□□□□□ -1.94
APOEP02649 AL136520.1-201ENST00000600311 1322 ntBASIC2.91□□□□□ -1.94
APOEP02649 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
APOEP02649 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.9□□□□□ -1.94
APOEP02649 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.94
APOEP02649 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC2.9□□□□□ -1.95
APOEP02649 NSRP1P1-201ENST00000444067 1693 ntBASIC2.9□□□□□ -1.95
APOEP02649 SNORA80A-201ENST00000363922 136 ntBASIC2.9□□□□□ -1.95
APOEP02649 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC2.9□□□□□ -1.95
APOEP02649 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC2.9□□□□□ -1.95
APOEP02649 RPS3AP26-201ENST00000398259 784 ntBASIC2.9□□□□□ -1.95
APOEP02649 HMGN2P35-201ENST00000412164 270 ntBASIC2.9□□□□□ -1.95
APOEP02649 RPS7P2-201ENST00000435134 607 ntBASIC2.9□□□□□ -1.95
APOEP02649 AL513043.1-201ENST00000439124 535 ntBASIC2.9□□□□□ -1.95
APOEP02649 ELOCP13-201ENST00000443934 329 ntBASIC2.9□□□□□ -1.95
APOEP02649 HMGB1P15-201ENST00000453854 435 ntBASIC2.9□□□□□ -1.95
APOEP02649 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC2.9□□□□□ -1.95
APOEP02649 AP001025.2-201ENST00000490908 477 ntBASIC2.9□□□□□ -1.95
APOEP02649 AL024509.2-201ENST00000493462 493 ntBASIC2.9□□□□□ -1.95
APOEP02649 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
APOEP02649 PANCR-202ENST00000513690 448 ntTSL 2 BASIC2.9□□□□□ -1.95
APOEP02649 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC2.9□□□□□ -1.95
APOEP02649 OR4A45P-201ENST00000529954 901 ntBASIC2.9□□□□□ -1.95
APOEP02649 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC2.9□□□□□ -1.95
APOEP02649 ZNF861P-201ENST00000588126 639 ntBASIC2.9□□□□□ -1.95
APOEP02649 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC2.9□□□□□ -1.95
APOEP02649 BDH2P1-201ENST00000602288 736 ntBASIC2.9□□□□□ -1.95
APOEP02649 AC096947.1-201ENST00000603233 470 ntBASIC2.9□□□□□ -1.95
APOEP02649 AC092593.1-201ENST00000515413 1815 ntBASIC2.9□□□□□ -1.95
APOEP02649 AL359893.1-201ENST00000447628 1580 ntBASIC2.9□□□□□ -1.95
APOEP02649 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
APOEP02649 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
APOEP02649 MIR26A1-201ENST00000362205 77 ntBASIC2.89□□□□□ -1.95
APOEP02649 RNU4-74P-201ENST00000411280 161 ntBASIC2.89□□□□□ -1.95
APOEP02649 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC2.89□□□□□ -1.95
APOEP02649 AC073508.1-201ENST00000428866 656 ntBASIC2.89□□□□□ -1.95
APOEP02649 YWHAZP8-201ENST00000436935 731 ntBASIC2.89□□□□□ -1.95
APOEP02649 AC010285.1-201ENST00000470580 392 ntBASIC2.89□□□□□ -1.95
APOEP02649 RPL21P131-201ENST00000497298 483 ntBASIC2.89□□□□□ -1.95
APOEP02649 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.89□□□□□ -1.95
APOEP02649 AC093770.1-201ENST00000511559 571 ntBASIC2.89□□□□□ -1.95
APOEP02649 AC104997.1-201ENST00000519761 717 ntBASIC2.89□□□□□ -1.95
APOEP02649 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC2.89□□□□□ -1.95
APOEP02649 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC2.89□□□□□ -1.95
APOEP02649 AC125611.2-201ENST00000551907 647 ntBASIC2.89□□□□□ -1.95
APOEP02649 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC2.89□□□□□ -1.95
APOEP02649 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC2.89□□□□□ -1.95
APOEP02649 CYCSP39-201ENST00000565821 309 ntBASIC2.89□□□□□ -1.95
APOEP02649 MIMT1-201ENST00000597105 1050 ntBASIC2.89□□□□□ -1.95
APOEP02649 AP000787.2-201ENST00000604432 568 ntBASIC2.89□□□□□ -1.95
APOEP02649 AL137843.1-201ENST00000605078 385 ntBASIC2.89□□□□□ -1.95
APOEP02649 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC2.89□□□□□ -1.95
APOEP02649 AC107905.1-201ENST00000616204 426 ntBASIC2.89□□□□□ -1.95
APOEP02649 AC020923.1-201ENST00000624021 917 ntBASIC2.89□□□□□ -1.95
APOEP02649 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
APOEP02649 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.89□□□□□ -1.95
APOEP02649 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
APOEP02649 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
APOEP02649 AP002907.1-201ENST00000606361 1430 ntBASIC2.88□□□□□ -1.95
APOEP02649 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
APOEP02649 RNU6-1243P-201ENST00000364028 107 ntBASIC2.88□□□□□ -1.95
APOEP02649 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
APOEP02649 AL138827.1-201ENST00000402666 306 ntBASIC2.88□□□□□ -1.95
APOEP02649 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC2.88□□□□□ -1.95
APOEP02649 YPEL5P1-201ENST00000419731 367 ntBASIC2.88□□□□□ -1.95
APOEP02649 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC2.88□□□□□ -1.95
APOEP02649 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.88□□□□□ -1.95
APOEP02649 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC2.88□□□□□ -1.95
APOEP02649 AC000041.1-201ENST00000439655 175 ntBASIC2.88□□□□□ -1.95
APOEP02649 RABEPKP1-201ENST00000440529 1026 ntBASIC2.88□□□□□ -1.95
APOEP02649 NPM1P13-201ENST00000452663 865 ntBASIC2.88□□□□□ -1.95
APOEP02649 RPS24P6-201ENST00000452670 400 ntBASIC2.88□□□□□ -1.95
APOEP02649 HMGB1P25-201ENST00000468402 607 ntBASIC2.88□□□□□ -1.95
APOEP02649 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC2.88□□□□□ -1.95
APOEP02649 RN7SKP96-201ENST00000516948 297 ntBASIC2.88□□□□□ -1.95
APOEP02649 IGKV2D-36-201ENST00000518643 226 ntBASIC2.88□□□□□ -1.95
APOEP02649 COX6CP8-201ENST00000522620 226 ntBASIC2.88□□□□□ -1.95
APOEP02649 AC084033.1-201ENST00000550830 633 ntBASIC2.88□□□□□ -1.95
APOEP02649 GTF3AP2-201ENST00000557014 266 ntBASIC2.88□□□□□ -1.95
APOEP02649 AC107954.1-201ENST00000565906 727 ntBASIC2.88□□□□□ -1.95
APOEP02649 AC138761.3-201ENST00000579993 334 ntBASIC2.88□□□□□ -1.95
APOEP02649 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC2.88□□□□□ -1.95
APOEP02649 AC113368.1-201ENST00000603736 382 ntBASIC2.88□□□□□ -1.95
APOEP02649 AL009028.1-201ENST00000604895 802 ntBASIC2.88□□□□□ -1.95
APOEP02649 BNIP3P19-201ENST00000605397 577 ntBASIC2.88□□□□□ -1.95
APOEP02649 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC2.88□□□□□ -1.95
APOEP02649 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC2.88□□□□□ -1.95
APOEP02649 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC2.88□□□□□ -1.95
APOEP02649 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC2.87□□□□□ -1.95
APOEP02649 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.87□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 126.6 ms