Protein–RNA interactions for Protein: O95398

RAPGEF3, Rap guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3O95398 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC5.67□□□□□ -1.5
RAPGEF3O95398 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
RAPGEF3O95398 RNU6-433P-201ENST00000363216 104 ntBASIC5.67□□□□□ -1.5
RAPGEF3O95398 SNORA3C-201ENST00000408792 125 ntBASIC5.67□□□□□ -1.5
RAPGEF3O95398 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC5.67□□□□□ -1.5
RAPGEF3O95398 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC5.67□□□□□ -1.5
RAPGEF3O95398 RPS20P1-201ENST00000434853 354 ntBASIC5.67□□□□□ -1.5
RAPGEF3O95398 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC5.67□□□□□ -1.5
RAPGEF3O95398 COX6CP12-201ENST00000446748 202 ntBASIC5.67□□□□□ -1.5
RAPGEF3O95398 AL592447.1-201ENST00000447592 540 ntBASIC5.67□□□□□ -1.5
RAPGEF3O95398 AC114981.1-201ENST00000503897 678 ntBASIC5.67□□□□□ -1.5
RAPGEF3O95398 AC010625.1-201ENST00000511296 403 ntBASIC5.67□□□□□ -1.5
RAPGEF3O95398 AC006499.2-201ENST00000513470 337 ntBASIC5.67□□□□□ -1.5
RAPGEF3O95398 SNORA70.18-201ENST00000516696 98 ntBASIC5.67□□□□□ -1.5
RAPGEF3O95398 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC5.67□□□□□ -1.5
RAPGEF3O95398 AC022880.1-201ENST00000534017 973 ntBASIC5.67□□□□□ -1.5
RAPGEF3O95398 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC5.67□□□□□ -1.5
RAPGEF3O95398 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC5.67□□□□□ -1.5
RAPGEF3O95398 AC018552.3-201ENST00000567416 561 ntBASIC5.67□□□□□ -1.5
RAPGEF3O95398 SNORD39.3-201ENST00000584451 71 ntBASIC5.67□□□□□ -1.5
RAPGEF3O95398 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC5.67□□□□□ -1.5
RAPGEF3O95398 NF1P5-201ENST00000588287 448 ntBASIC5.67□□□□□ -1.5
RAPGEF3O95398 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC5.67□□□□□ -1.5
RAPGEF3O95398 SNORA62.6-201ENST00000606322 83 ntBASIC5.67□□□□□ -1.5
RAPGEF3O95398 AC004492.1-201ENST00000607036 742 ntBASIC5.67□□□□□ -1.5
RAPGEF3O95398 AC010678.1-201ENST00000614118 713 ntBASIC5.67□□□□□ -1.5
RAPGEF3O95398 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC5.67□□□□□ -1.5
RAPGEF3O95398 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
RAPGEF3O95398 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
RAPGEF3O95398 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC5.67□□□□□ -1.5
RAPGEF3O95398 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC5.67□□□□□ -1.5
RAPGEF3O95398 MTND4P4-201ENST00000439033 1366 ntBASIC5.67□□□□□ -1.5
RAPGEF3O95398 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
RAPGEF3O95398 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
RAPGEF3O95398 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC5.66□□□□□ -1.5
RAPGEF3O95398 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
RAPGEF3O95398 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
RAPGEF3O95398 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
RAPGEF3O95398 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC5.66□□□□□ -1.5
RAPGEF3O95398 RNU6-1119P-201ENST00000384349 108 ntBASIC5.66□□□□□ -1.5
RAPGEF3O95398 DSTNP4-201ENST00000399472 474 ntBASIC5.66□□□□□ -1.5
RAPGEF3O95398 RPS7P13-201ENST00000413955 498 ntBASIC5.66□□□□□ -1.5
RAPGEF3O95398 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC5.66□□□□□ -1.5
RAPGEF3O95398 PRELID3BP10-201ENST00000431957 584 ntBASIC5.66□□□□□ -1.5
RAPGEF3O95398 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC5.66□□□□□ -1.5
RAPGEF3O95398 MTCO3P2-201ENST00000457365 171 ntBASIC5.66□□□□□ -1.5
RAPGEF3O95398 AC109458.1-201ENST00000508858 316 ntBASIC5.66□□□□□ -1.5
RAPGEF3O95398 AC026412.2-201ENST00000512270 1075 ntBASIC5.66□□□□□ -1.5
RAPGEF3O95398 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC5.66□□□□□ -1.5
RAPGEF3O95398 AC116347.2-201ENST00000514912 523 ntBASIC5.66□□□□□ -1.5
RAPGEF3O95398 RNU6-720P-201ENST00000516363 108 ntBASIC5.66□□□□□ -1.5
RAPGEF3O95398 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC5.66□□□□□ -1.5
RAPGEF3O95398 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC5.66□□□□□ -1.5
RAPGEF3O95398 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC5.66□□□□□ -1.5
RAPGEF3O95398 AC087683.1-201ENST00000591187 441 ntBASIC5.66□□□□□ -1.5
RAPGEF3O95398 AC239868.4-201ENST00000608318 671 ntBASIC5.66□□□□□ -1.5
RAPGEF3O95398 SMCR2_2.1-201ENST00000619783 161 ntBASIC5.66□□□□□ -1.5
RAPGEF3O95398 AL356596.1-201ENST00000624230 379 ntBASIC5.66□□□□□ -1.5
RAPGEF3O95398 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
RAPGEF3O95398 EEF1A1P42-201ENST00000613436 1331 ntBASIC5.66□□□□□ -1.5
RAPGEF3O95398 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
RAPGEF3O95398 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC5.66□□□□□ -1.5
RAPGEF3O95398 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
RAPGEF3O95398 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC5.65□□□□□ -1.5
RAPGEF3O95398 AC090337.1-201ENST00000579651 2074 ntBASIC5.65□□□□□ -1.5
RAPGEF3O95398 MAPK10-303ENST00000641324 3959 ntBASIC5.65□□□□□ -1.5
RAPGEF3O95398 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC5.65□□□□□ -1.5
RAPGEF3O95398 FGF7P2-201ENST00000332473 296 ntBASIC5.65□□□□□ -1.5
RAPGEF3O95398 RNU6-657P-201ENST00000383904 107 ntBASIC5.65□□□□□ -1.5
RAPGEF3O95398 RNU6-921P-201ENST00000384361 107 ntBASIC5.65□□□□□ -1.5
RAPGEF3O95398 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
RAPGEF3O95398 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC5.65□□□□□ -1.5
RAPGEF3O95398 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC5.65□□□□□ -1.5
RAPGEF3O95398 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC5.65□□□□□ -1.5
RAPGEF3O95398 AL133384.1-201ENST00000412744 351 ntBASIC5.65□□□□□ -1.5
RAPGEF3O95398 ZYG11AP1-201ENST00000430329 837 ntBASIC5.65□□□□□ -1.5
RAPGEF3O95398 USP9YP14-201ENST00000430663 563 ntBASIC5.65□□□□□ -1.5
RAPGEF3O95398 AL365184.2-201ENST00000431139 435 ntBASIC5.65□□□□□ -1.5
RAPGEF3O95398 AC023347.2-201ENST00000433994 462 ntBASIC5.65□□□□□ -1.5
RAPGEF3O95398 AC005019.1-201ENST00000436455 431 ntBASIC5.65□□□□□ -1.5
RAPGEF3O95398 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC5.65□□□□□ -1.5
RAPGEF3O95398 USP9YP29-201ENST00000445112 563 ntBASIC5.65□□□□□ -1.5
RAPGEF3O95398 RPL39P6-201ENST00000448289 150 ntBASIC5.65□□□□□ -1.5
RAPGEF3O95398 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC5.65□□□□□ -1.5
RAPGEF3O95398 SSXP1-201ENST00000453640 473 ntBASIC5.65□□□□□ -1.5
RAPGEF3O95398 MTCYBP1-201ENST00000454315 1119 ntBASIC5.65□□□□□ -1.5
RAPGEF3O95398 AC092757.1-201ENST00000467293 467 ntBASIC5.65□□□□□ -1.5
RAPGEF3O95398 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC5.65□□□□□ -1.5
RAPGEF3O95398 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC5.65□□□□□ -1.5
RAPGEF3O95398 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC5.65□□□□□ -1.5
RAPGEF3O95398 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC5.65□□□□□ -1.5
RAPGEF3O95398 RAC1P2-201ENST00000511164 579 ntBASIC5.65□□□□□ -1.5
RAPGEF3O95398 AC074029.1-201ENST00000552531 1044 ntBASIC5.65□□□□□ -1.5
RAPGEF3O95398 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC5.65□□□□□ -1.5
RAPGEF3O95398 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC5.65□□□□□ -1.5
RAPGEF3O95398 AC107214.2-201ENST00000608204 634 ntBASIC5.65□□□□□ -1.5
RAPGEF3O95398 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.51
RAPGEF3O95398 PABPC1P9-201ENST00000426076 1612 ntBASIC5.65□□□□□ -1.51
RAPGEF3O95398 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.51
RAPGEF3O95398 SPATA31D2P-201ENST00000429999 4388 ntBASIC5.65□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 100.6 ms