Protein–RNA interactions for Protein: O95197

RTN3, Reticulon-3, humanhuman

Predicted RBP Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3O95197 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
RTN3O95197 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
RTN3O95197 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC4.13□□□□□ -1.75
RTN3O95197 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC4.13□□□□□ -1.75
RTN3O95197 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC4.13□□□□□ -1.75
RTN3O95197 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
RTN3O95197 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
RTN3O95197 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
RTN3O95197 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
RTN3O95197 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC4.13□□□□□ -1.75
RTN3O95197 RNU6-28P-201ENST00000362378 107 ntBASIC4.13□□□□□ -1.75
RTN3O95197 SNORA51.2-201ENST00000364595 132 ntBASIC4.13□□□□□ -1.75
RTN3O95197 AL359837.1-201ENST00000381357 287 ntBASIC4.13□□□□□ -1.75
RTN3O95197 RPL32P23-201ENST00000397237 405 ntBASIC4.13□□□□□ -1.75
RTN3O95197 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC4.13□□□□□ -1.75
RTN3O95197 AC099677.1-201ENST00000420575 175 ntBASIC4.13□□□□□ -1.75
RTN3O95197 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC4.13□□□□□ -1.75
RTN3O95197 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC4.13□□□□□ -1.75
RTN3O95197 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC4.13□□□□□ -1.75
RTN3O95197 AL354941.1-201ENST00000438600 464 ntBASIC4.13□□□□□ -1.75
RTN3O95197 HMGB1P37-201ENST00000439613 609 ntBASIC4.13□□□□□ -1.75
RTN3O95197 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC4.13□□□□□ -1.75
RTN3O95197 AC104978.1-201ENST00000449387 391 ntBASIC4.13□□□□□ -1.75
RTN3O95197 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC4.13□□□□□ -1.75
RTN3O95197 RPS24P6-201ENST00000452670 400 ntBASIC4.13□□□□□ -1.75
RTN3O95197 HMGB1P15-201ENST00000453854 435 ntBASIC4.13□□□□□ -1.75
RTN3O95197 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC4.13□□□□□ -1.75
RTN3O95197 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC4.13□□□□□ -1.75
RTN3O95197 AC010285.1-201ENST00000470580 392 ntBASIC4.13□□□□□ -1.75
RTN3O95197 RPL31P50-201ENST00000471002 296 ntBASIC4.13□□□□□ -1.75
RTN3O95197 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC4.13□□□□□ -1.75
RTN3O95197 AHI1-208ENST00000488690 712 ntTSL 5 BASIC4.13□□□□□ -1.75
RTN3O95197 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
RTN3O95197 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC4.13□□□□□ -1.75
RTN3O95197 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
RTN3O95197 MTCO1P49-201ENST00000523429 802 ntBASIC4.13□□□□□ -1.75
RTN3O95197 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC4.13□□□□□ -1.75
RTN3O95197 SETP7-201ENST00000552169 453 ntBASIC4.13□□□□□ -1.75
RTN3O95197 AC002400.1-201ENST00000569310 726 ntBASIC4.13□□□□□ -1.75
RTN3O95197 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC4.13□□□□□ -1.75
RTN3O95197 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC4.13□□□□□ -1.75
RTN3O95197 AC006130.2-201ENST00000586202 326 ntBASIC4.13□□□□□ -1.75
RTN3O95197 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC4.13□□□□□ -1.75
RTN3O95197 AC015726.1-201ENST00000602353 681 ntBASIC4.13□□□□□ -1.75
RTN3O95197 BBIP1P1-201ENST00000602999 279 ntBASIC4.13□□□□□ -1.75
RTN3O95197 AL049634.3-201ENST00000604968 457 ntBASIC4.13□□□□□ -1.75
RTN3O95197 AL133507.1-201ENST00000605269 557 ntBASIC4.13□□□□□ -1.75
RTN3O95197 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC4.13□□□□□ -1.75
RTN3O95197 AL596245.1-201ENST00000618994 362 ntBASIC4.13□□□□□ -1.75
RTN3O95197 PACRG-211ENST00000621363 360 ntTSL 5 BASIC4.13□□□□□ -1.75
RTN3O95197 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC4.13□□□□□ -1.75
RTN3O95197 AC244205.2-202ENST00000635781 342 ntBASIC4.13□□□□□ -1.75
RTN3O95197 AL773545.4-201ENST00000637262 310 ntBASIC4.13□□□□□ -1.75
RTN3O95197 AL513478.4-201ENST00000641636 310 ntBASIC4.13□□□□□ -1.75
RTN3O95197 OTUD4P1-201ENST00000237841 3067 ntBASIC4.13□□□□□ -1.75
RTN3O95197 ZNF542P-204ENST00000482727 1305 ntBASIC4.13□□□□□ -1.75
RTN3O95197 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC4.13□□□□□ -1.75
RTN3O95197 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC4.13□□□□□ -1.75
RTN3O95197 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
RTN3O95197 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
RTN3O95197 SGO1P2-201ENST00000429458 1589 ntBASIC4.12□□□□□ -1.75
RTN3O95197 TEX30-204ENST00000376027 1106 ntTSL 5 BASIC4.12□□□□□ -1.75
RTN3O95197 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
RTN3O95197 SNORA3.3-201ENST00000408712 125 ntBASIC4.12□□□□□ -1.75
RTN3O95197 PIGPP2-201ENST00000411569 458 ntBASIC4.12□□□□□ -1.75
RTN3O95197 CYCSP19-201ENST00000411715 316 ntBASIC4.12□□□□□ -1.75
RTN3O95197 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC4.12□□□□□ -1.75
RTN3O95197 AC083875.1-201ENST00000419509 405 ntBASIC4.12□□□□□ -1.75
RTN3O95197 AC005005.2-201ENST00000420779 380 ntBASIC4.12□□□□□ -1.75
RTN3O95197 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC4.12□□□□□ -1.75
RTN3O95197 AL022400.1-201ENST00000423946 935 ntBASIC4.12□□□□□ -1.75
RTN3O95197 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC4.12□□□□□ -1.75
RTN3O95197 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC4.12□□□□□ -1.75
RTN3O95197 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC4.12□□□□□ -1.75
RTN3O95197 BX322784.1-201ENST00000455793 1077 ntBASIC4.12□□□□□ -1.75
RTN3O95197 snoU13.24-201ENST00000458998 104 ntBASIC4.12□□□□□ -1.75
RTN3O95197 AC004263.1-201ENST00000479327 332 ntBASIC4.12□□□□□ -1.75
RTN3O95197 RN7SL323P-201ENST00000494712 295 ntBASIC4.12□□□□□ -1.75
RTN3O95197 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC4.12□□□□□ -1.75
RTN3O95197 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC4.12□□□□□ -1.75
RTN3O95197 AC021146.1-201ENST00000511202 716 ntBASIC4.12□□□□□ -1.75
RTN3O95197 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC4.12□□□□□ -1.75
RTN3O95197 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC4.12□□□□□ -1.75
RTN3O95197 AC034223.2-201ENST00000511840 425 ntTSL 3 BASIC4.12□□□□□ -1.75
RTN3O95197 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC4.12□□□□□ -1.75
RTN3O95197 AC087369.1-201ENST00000520775 996 ntBASIC4.12□□□□□ -1.75
RTN3O95197 COX6CP8-201ENST00000522620 226 ntBASIC4.12□□□□□ -1.75
RTN3O95197 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC4.12□□□□□ -1.75
RTN3O95197 AC018630.1-201ENST00000541376 925 ntBASIC4.12□□□□□ -1.75
RTN3O95197 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC4.12□□□□□ -1.75
RTN3O95197 OR6C7P-201ENST00000547875 934 ntBASIC4.12□□□□□ -1.75
RTN3O95197 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC4.12□□□□□ -1.75
RTN3O95197 GNRHR2P1-201ENST00000555315 631 ntBASIC4.12□□□□□ -1.75
RTN3O95197 AC090615.1-201ENST00000577519 154 ntBASIC4.12□□□□□ -1.75
RTN3O95197 SNORD84-203ENST00000584275 78 ntBASIC4.12□□□□□ -1.75
RTN3O95197 MIR4999-201ENST00000585029 91 ntBASIC4.12□□□□□ -1.75
RTN3O95197 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC4.12□□□□□ -1.75
RTN3O95197 VN1R92P-201ENST00000598511 928 ntBASIC4.12□□□□□ -1.75
RTN3O95197 AC006539.2-201ENST00000601729 572 ntBASIC4.12□□□□□ -1.75
RTN3O95197 AL365503.1-201ENST00000605247 905 ntBASIC4.12□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 87.7 ms