Protein–RNA interactions for Protein: O76039

CDKL5, Cyclin-dependent kinase-like 5, humanhuman

Predictions only

Length 1,030 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5O76039 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC4.74□□□□□ -1.65
CDKL5O76039 COX6CP15-201ENST00000426313 211 ntBASIC4.74□□□□□ -1.65
CDKL5O76039 AL358472.1-201ENST00000431295 329 ntBASIC4.74□□□□□ -1.65
CDKL5O76039 RPS24P8-201ENST00000431490 402 ntBASIC4.74□□□□□ -1.65
CDKL5O76039 AC000111.3-201ENST00000433478 193 ntBASIC4.74□□□□□ -1.65
CDKL5O76039 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC4.74□□□□□ -1.65
CDKL5O76039 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC4.74□□□□□ -1.65
CDKL5O76039 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC4.74□□□□□ -1.65
CDKL5O76039 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC4.74□□□□□ -1.65
CDKL5O76039 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC4.74□□□□□ -1.65
CDKL5O76039 AC091564.1-201ENST00000464563 479 ntBASIC4.74□□□□□ -1.65
CDKL5O76039 RPS3AP17-201ENST00000472594 777 ntBASIC4.74□□□□□ -1.65
CDKL5O76039 LARP1BP2-201ENST00000486594 519 ntBASIC4.74□□□□□ -1.65
CDKL5O76039 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC4.74□□□□□ -1.65
CDKL5O76039 ARL2BPP6-201ENST00000512757 439 ntBASIC4.74□□□□□ -1.65
CDKL5O76039 AC074344.1-201ENST00000512823 224 ntBASIC4.74□□□□□ -1.65
CDKL5O76039 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC4.74□□□□□ -1.65
CDKL5O76039 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC4.74□□□□□ -1.65
CDKL5O76039 MIR5697-201ENST00000578045 78 ntBASIC4.74□□□□□ -1.65
CDKL5O76039 AC023575.1-201ENST00000580510 358 ntBASIC4.74□□□□□ -1.65
CDKL5O76039 MIR4719-201ENST00000585233 84 ntBASIC4.74□□□□□ -1.65
CDKL5O76039 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC4.74□□□□□ -1.65
CDKL5O76039 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC4.74□□□□□ -1.65
CDKL5O76039 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC4.74□□□□□ -1.65
CDKL5O76039 TEX41-238ENST00000604253 709 ntTSL 5 BASIC4.74□□□□□ -1.65
CDKL5O76039 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
CDKL5O76039 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC4.74□□□□□ -1.65
CDKL5O76039 AC128687.2-201ENST00000609657 566 ntBASIC4.74□□□□□ -1.65
CDKL5O76039 AC091304.9-201ENST00000612091 226 ntBASIC4.74□□□□□ -1.65
CDKL5O76039 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
CDKL5O76039 AL773545.4-201ENST00000637262 310 ntBASIC4.74□□□□□ -1.65
CDKL5O76039 AL513478.4-201ENST00000641636 310 ntBASIC4.74□□□□□ -1.65
CDKL5O76039 AP000756.2-201ENST00000624168 2567 ntBASIC4.74□□□□□ -1.65
CDKL5O76039 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC4.74□□□□□ -1.65
CDKL5O76039 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC4.74□□□□□ -1.65
CDKL5O76039 RMST-202ENST00000541282 2099 ntTSL 2 BASIC4.74□□□□□ -1.65
CDKL5O76039 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
CDKL5O76039 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC4.74□□□□□ -1.65
CDKL5O76039 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
CDKL5O76039 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
CDKL5O76039 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC4.73□□□□□ -1.65
CDKL5O76039 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC4.73□□□□□ -1.65
CDKL5O76039 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
CDKL5O76039 OR11H4-201ENST00000315409 1082 ntBASIC4.73□□□□□ -1.65
CDKL5O76039 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
CDKL5O76039 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC4.73□□□□□ -1.65
CDKL5O76039 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC4.73□□□□□ -1.65
CDKL5O76039 AL109913.1-201ENST00000421173 514 ntBASIC4.73□□□□□ -1.65
CDKL5O76039 ZNF863P-201ENST00000426746 417 ntBASIC4.73□□□□□ -1.65
CDKL5O76039 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC4.73□□□□□ -1.65
CDKL5O76039 ZYG11AP1-201ENST00000430329 837 ntBASIC4.73□□□□□ -1.65
CDKL5O76039 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC4.73□□□□□ -1.65
CDKL5O76039 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC4.73□□□□□ -1.65
CDKL5O76039 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
CDKL5O76039 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC4.73□□□□□ -1.65
CDKL5O76039 HMGB1P31-201ENST00000437242 427 ntBASIC4.73□□□□□ -1.65
CDKL5O76039 RPL7P28-201ENST00000437739 740 ntBASIC4.73□□□□□ -1.65
CDKL5O76039 RPS4XP4-201ENST00000443195 763 ntBASIC4.73□□□□□ -1.65
CDKL5O76039 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC4.73□□□□□ -1.65
CDKL5O76039 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
CDKL5O76039 AL451050.1-201ENST00000450126 415 ntBASIC4.73□□□□□ -1.65
CDKL5O76039 TRGVB-201ENST00000453257 471 ntBASIC4.73□□□□□ -1.65
CDKL5O76039 AL033528.1-201ENST00000453780 140 ntBASIC4.73□□□□□ -1.65
CDKL5O76039 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC4.73□□□□□ -1.65
CDKL5O76039 RPL7AP52-201ENST00000458096 790 ntBASIC4.73□□□□□ -1.65
CDKL5O76039 AL672167.3-201ENST00000465951 960 ntBASIC4.73□□□□□ -1.65
CDKL5O76039 AC092989.1-201ENST00000481235 277 ntBASIC4.73□□□□□ -1.65
CDKL5O76039 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
CDKL5O76039 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC4.73□□□□□ -1.65
CDKL5O76039 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC4.73□□□□□ -1.65
CDKL5O76039 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC4.73□□□□□ -1.65
CDKL5O76039 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC4.73□□□□□ -1.65
CDKL5O76039 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC4.73□□□□□ -1.65
CDKL5O76039 AC007424.1-203ENST00000554613 687 ntBASIC4.73□□□□□ -1.65
CDKL5O76039 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC4.73□□□□□ -1.65
CDKL5O76039 AC011477.5-201ENST00000586571 259 ntBASIC4.73□□□□□ -1.65
CDKL5O76039 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
CDKL5O76039 AL353621.2-201ENST00000605340 133 ntBASIC4.73□□□□□ -1.65
CDKL5O76039 AC092954.2-201ENST00000609103 430 ntBASIC4.73□□□□□ -1.65
CDKL5O76039 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC4.73□□□□□ -1.65
CDKL5O76039 AC104985.2-201ENST00000620598 500 ntBASIC4.73□□□□□ -1.65
CDKL5O76039 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC4.73□□□□□ -1.65
CDKL5O76039 AC231657.1-201ENST00000624313 397 ntBASIC4.73□□□□□ -1.65
CDKL5O76039 AC093591.3-201ENST00000634516 308 ntBASIC4.73□□□□□ -1.65
CDKL5O76039 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC4.73□□□□□ -1.65
CDKL5O76039 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
CDKL5O76039 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC4.73□□□□□ -1.65
CDKL5O76039 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
CDKL5O76039 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC4.73□□□□□ -1.65
CDKL5O76039 DPY19L2P2-203ENST00000435536 1858 ntBASIC4.73□□□□□ -1.65
CDKL5O76039 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC4.72□□□□□ -1.65
CDKL5O76039 AL512646.1-201ENST00000269395 1077 ntBASIC4.72□□□□□ -1.65
CDKL5O76039 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
CDKL5O76039 SNRPEP3-201ENST00000338402 276 ntBASIC4.72□□□□□ -1.65
CDKL5O76039 RNU6-797P-201ENST00000363101 109 ntBASIC4.72□□□□□ -1.65
CDKL5O76039 U8.14-201ENST00000390843 143 ntBASIC4.72□□□□□ -1.65
CDKL5O76039 RNU11-4P-201ENST00000391149 133 ntBASIC4.72□□□□□ -1.65
CDKL5O76039 ENSAP1-201ENST00000392855 326 ntBASIC4.72□□□□□ -1.65
CDKL5O76039 CIR1P3-201ENST00000405137 479 ntBASIC4.72□□□□□ -1.65
CDKL5O76039 HSPE1P12-201ENST00000412576 301 ntBASIC4.72□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 79.2 ms