Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 TOMM22P6-201ENST00000465035 409 ntBASIC1.04□□□□□ -2.24
USH2AO75445 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC1.04□□□□□ -2.24
USH2AO75445 AP000919.1-202ENST00000581139 1264 ntBASIC1.04□□□□□ -2.24
USH2AO75445 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC1.04□□□□□ -2.24
USH2AO75445 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC1.04□□□□□ -2.24
USH2AO75445 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC1.04□□□□□ -2.24
USH2AO75445 AF127577.6-201ENST00000623352 2191 ntBASIC1.04□□□□□ -2.24
USH2AO75445 LINC02397-201ENST00000504409 10626 ntTSL 1 (best) BASIC1.04□□□□□ -2.24
USH2AO75445 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC1.04□□□□□ -2.24
USH2AO75445 OR52B1P-201ENST00000316506 909 ntBASIC1.04□□□□□ -2.24
USH2AO75445 Y_RNA.354-201ENST00000365448 111 ntBASIC1.04□□□□□ -2.24
USH2AO75445 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC1.04□□□□□ -2.24
USH2AO75445 HMGB1P31-201ENST00000437242 427 ntBASIC1.04□□□□□ -2.24
USH2AO75445 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC1.04□□□□□ -2.24
USH2AO75445 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC1.04□□□□□ -2.24
USH2AO75445 RN7SKP40-201ENST00000517211 242 ntBASIC1.04□□□□□ -2.24
USH2AO75445 AC093524.1-201ENST00000564266 1094 ntBASIC1.04□□□□□ -2.24
USH2AO75445 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC1.04□□□□□ -2.24
USH2AO75445 AC015911.5-201ENST00000587076 451 ntBASIC1.04□□□□□ -2.24
USH2AO75445 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC1.04□□□□□ -2.24
USH2AO75445 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC1.04□□□□□ -2.24
USH2AO75445 AC109315.1-201ENST00000584143 1347 ntBASIC1.04□□□□□ -2.24
USH2AO75445 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC1.04□□□□□ -2.24
USH2AO75445 FRG1BP-201ENST00000278882 761 ntBASIC1.04□□□□□ -2.24
USH2AO75445 RNA5SP456-201ENST00000364002 114 ntBASIC1.04□□□□□ -2.24
USH2AO75445 SNORA46-201ENST00000384762 135 ntBASIC1.04□□□□□ -2.24
USH2AO75445 AL138878.1-201ENST00000405131 347 ntBASIC1.04□□□□□ -2.24
USH2AO75445 B3GALNT1P1-201ENST00000420569 975 ntBASIC1.04□□□□□ -2.24
USH2AO75445 SNORD13-201ENST00000459299 104 ntBASIC1.04□□□□□ -2.24
USH2AO75445 AC016957.1-201ENST00000534895 309 ntBASIC1.04□□□□□ -2.24
USH2AO75445 OR1S1-201ENST00000624470 978 ntBASIC1.04□□□□□ -2.24
USH2AO75445 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.04□□□□□ -2.24
USH2AO75445 AC008432.1-201ENST00000615912 1320 ntBASIC1.04□□□□□ -2.24
USH2AO75445 MIR9-3-201ENST00000385084 90 ntBASIC1.03□□□□□ -2.24
USH2AO75445 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC1.03□□□□□ -2.24
USH2AO75445 RPL38P4-201ENST00000502376 214 ntBASIC1.03□□□□□ -2.24
USH2AO75445 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC1.03□□□□□ -2.24
USH2AO75445 AC100870.1-201ENST00000522035 505 ntBASIC1.03□□□□□ -2.24
USH2AO75445 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC1.03□□□□□ -2.24
USH2AO75445 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC1.03□□□□□ -2.24
USH2AO75445 MIR3605-201ENST00000583214 100 ntBASIC1.03□□□□□ -2.24
USH2AO75445 OR1AB1P-201ENST00000585564 761 ntBASIC1.03□□□□□ -2.24
USH2AO75445 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC1.03□□□□□ -2.24
USH2AO75445 OR10AB1P-201ENST00000609613 938 ntBASIC1.03□□□□□ -2.24
USH2AO75445 AL596275.2-204ENST00000641628 552 ntBASIC1.03□□□□□ -2.24
USH2AO75445 AL596275.2-206ENST00000641957 626 ntBASIC1.03□□□□□ -2.24
USH2AO75445 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC1.03□□□□□ -2.24
USH2AO75445 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC1.03□□□□□ -2.24
USH2AO75445 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC1.03□□□□□ -2.24
USH2AO75445 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC1.03□□□□□ -2.24
USH2AO75445 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC1.03□□□□□ -2.24
USH2AO75445 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC1.03□□□□□ -2.24
USH2AO75445 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC1.03□□□□□ -2.24
USH2AO75445 AL391987.6-201ENST00000305671 199 ntBASIC1.03□□□□□ -2.24
USH2AO75445 MIR96-201ENST00000362288 78 ntBASIC1.03□□□□□ -2.24
USH2AO75445 AL355379.1-201ENST00000405542 640 ntBASIC1.03□□□□□ -2.24
USH2AO75445 FTH1P12-201ENST00000432137 551 ntBASIC1.03□□□□□ -2.24
USH2AO75445 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC1.03□□□□□ -2.24
USH2AO75445 snoU109.4-201ENST00000458953 143 ntBASIC1.03□□□□□ -2.24
USH2AO75445 RPL23AP71-201ENST00000470966 469 ntBASIC1.03□□□□□ -2.24
USH2AO75445 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC1.03□□□□□ -2.24
USH2AO75445 AC245166.1-201ENST00000521012 253 ntBASIC1.03□□□□□ -2.24
USH2AO75445 MTCYBP20-201ENST00000524239 1129 ntBASIC1.03□□□□□ -2.24
USH2AO75445 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC1.03□□□□□ -2.24
USH2AO75445 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC1.03□□□□□ -2.24
USH2AO75445 AC025260.1-201ENST00000548858 430 ntBASIC1.03□□□□□ -2.24
USH2AO75445 MIR4635-201ENST00000583759 79 ntBASIC1.03□□□□□ -2.24
USH2AO75445 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC1.03□□□□□ -2.24
USH2AO75445 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC1.03□□□□□ -2.24
USH2AO75445 RBM6-203ENST00000421682 684 ntTSL 2 BASIC1.03□□□□□ -2.24
USH2AO75445 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC1.03□□□□□ -2.24
USH2AO75445 AC011405.1-202ENST00000504658 803 ntTSL 3 BASIC1.03□□□□□ -2.24
USH2AO75445 AC005730.3-201ENST00000583067 366 ntBASIC1.03□□□□□ -2.24
USH2AO75445 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC1.03□□□□□ -2.24
USH2AO75445 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC1.03□□□□□ -2.24
USH2AO75445 AC138627.1-204ENST00000641894 765 ntBASIC1.03□□□□□ -2.24
USH2AO75445 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC1.03□□□□□ -2.24
USH2AO75445 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC1.03□□□□□ -2.24
USH2AO75445 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.03□□□□□ -2.24
USH2AO75445 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC1.03□□□□□ -2.24
USH2AO75445 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC1.03□□□□□ -2.24
USH2AO75445 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC1.03□□□□□ -2.24
USH2AO75445 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC1.03□□□□□ -2.24
USH2AO75445 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC1.03□□□□□ -2.24
USH2AO75445 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC1.03□□□□□ -2.24
USH2AO75445 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC1.03□□□□□ -2.24
USH2AO75445 AC008015.1-201ENST00000555505 465 ntBASIC1.03□□□□□ -2.24
USH2AO75445 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC1.03□□□□□ -2.24
USH2AO75445 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC1.03□□□□□ -2.24
USH2AO75445 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC1.03□□□□□ -2.24
USH2AO75445 MIR6515-201ENST00000619843 57 ntBASIC1.03□□□□□ -2.24
USH2AO75445 AC092628.2-201ENST00000622492 339 ntBASIC1.03□□□□□ -2.24
USH2AO75445 CRYM-AS1-204ENST00000637983 556 ntBASIC1.03□□□□□ -2.24
USH2AO75445 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC1.03□□□□□ -2.25
USH2AO75445 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC1.03□□□□□ -2.25
USH2AO75445 AC008264.2-201ENST00000610193 3731 ntBASIC1.03□□□□□ -2.25
USH2AO75445 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC1.03□□□□□ -2.25
USH2AO75445 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC1.02□□□□□ -2.25
USH2AO75445 AC073136.2-201ENST00000417282 849 ntBASIC1.02□□□□□ -2.25
USH2AO75445 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC1.02□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 87 ms